RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 CDKL5O76039 1030 aa17.47■□□□□ 0.39
SSH1-204ENST00000546697 SMIM10L2AP0DMW4 78 aa17.47■□□□□ 0.39
SSH1-204ENST00000546697 SMIM10L2BP0DMW5 78 aa17.47■□□□□ 0.39
SSH1-204ENST00000546697 ARP10275 920 aa17.47■□□□□ 0.39
SSH1-204ENST00000546697 CKBP12277 381 aa17.47■□□□□ 0.39
SSH1-204ENST00000546697 SELPP16109 830 aa17.47■□□□□ 0.39
SSH1-204ENST00000546697 TCF7P36402 384 aaPredicted RBP17.47■□□□□ 0.39
SSH1-204ENST00000546697 USP11P51784 963 aa17.47■□□□□ 0.39
SSH1-204ENST00000546697 SETQ01105 290 aaPredicted RBP17.47■□□□□ 0.39
SSH1-204ENST00000546697 LENG9Q96B70 501 aa17.47■□□□□ 0.39
SSH1-204ENST00000546697 SCLYQ96I15 445 aa17.47■□□□□ 0.39
SSH1-204ENST00000546697 PGBD1Q96JS3 809 aa17.47■□□□□ 0.39
SSH1-204ENST00000546697 ALG1Q9BT22 464 aa17.47■□□□□ 0.39
SSH1-204ENST00000546697 C22orf23Q9BZE7 217 aa17.47■□□□□ 0.39
SSH1-204ENST00000546697 MTIF3Q9H2K0 278 aaKnown RBP17.47■□□□□ 0.39
SSH1-204ENST00000546697 RNPEPQ9H4A4 650 aa17.47■□□□□ 0.39
SSH1-204ENST00000546697 VPS54Q9P1Q0 977 aa17.47■□□□□ 0.39
SSH1-204ENST00000546697 SLC9A2Q9UBY0 812 aa17.47■□□□□ 0.39
SSH1-204ENST00000546697 NRCAMQ92823 1304 aa17.47■□□□□ 0.39
SSH1-204ENST00000546697 MBLAC1A4D2B0 266 aaPredicted RBP17.46■□□□□ 0.39
SSH1-204ENST00000546697 CTDNEP1O95476 244 aa17.46■□□□□ 0.39
SSH1-204ENST00000546697 ACRP10323 421 aa17.46■□□□□ 0.39
SSH1-204ENST00000546697 JAKMIP3Q5VZ66 844 aa17.46■□□□□ 0.39
SSH1-204ENST00000546697 PLPPR4Q7Z2D5 763 aa17.46■□□□□ 0.39
SSH1-204ENST00000546697 RETREG2Q8NC44 543 aa17.46■□□□□ 0.39
SSH1-204ENST00000546697 IL27Q8NEV9 243 aa17.46■□□□□ 0.39
SSH1-204ENST00000546697 PPP1R13LQ8WUF5 828 aa17.46■□□□□ 0.39
SSH1-204ENST00000546697 WNT8BQ93098 351 aa17.46■□□□□ 0.39
SSH1-204ENST00000546697 MBOAT7Q96N66 472 aa17.46■□□□□ 0.39
SSH1-204ENST00000546697 PCYT2Q99447 389 aa17.46■□□□□ 0.39
SSH1-204ENST00000546697 ERAP1Q9NZ08 941 aa17.46■□□□□ 0.39
SSH1-204ENST00000546697 CXXC1Q9P0U4 656 aaPredicted RBP17.46■□□□□ 0.39
SSH1-204ENST00000546697 PCDHA4Q9UN74 947 aa17.46■□□□□ 0.39
SSH1-204ENST00000546697 NOD1Q9Y239 953 aa17.46■□□□□ 0.39
SSH1-204ENST00000546697 SCN5AQ14524 2016 aa17.45■□□□□ 0.38
SSH1-204ENST00000546697 CYP3A7-CYP3A51PA0A087WV96 503 aa17.45■□□□□ 0.38
SSH1-204ENST00000546697 C17orf102A2RUQ5 167 aa17.45■□□□□ 0.38
SSH1-204ENST00000546697 BAIAP3O94812 1187 aa17.45■□□□□ 0.38
SSH1-204ENST00000546697 GNAT1P11488 350 aa17.45■□□□□ 0.38
SSH1-204ENST00000546697 CYP3A7P24462 503 aa17.45■□□□□ 0.38
SSH1-204ENST00000546697 SLC26A2P50443 739 aa17.45■□□□□ 0.38
SSH1-204ENST00000546697 MKRN4PQ13434 485 aaPredicted RBP17.45■□□□□ 0.38
SSH1-204ENST00000546697 MOXD1Q6UVY6 613 aa17.45■□□□□ 0.38
SSH1-204ENST00000546697 LRRC8DQ7L1W4 858 aa17.45■□□□□ 0.38
SSH1-204ENST00000546697 TRIM50Q86XT4 487 aa17.45■□□□□ 0.38
SSH1-204ENST00000546697 DEFB123Q8N688 67 aa17.45■□□□□ 0.38
SSH1-204ENST00000546697 GTF3C6Q969F1 213 aa17.45■□□□□ 0.38
SSH1-204ENST00000546697 KIF2CQ99661 725 aa17.45■□□□□ 0.38
SSH1-204ENST00000546697 PHF20Q9BVI0 1012 aa17.45■□□□□ 0.38
SSH1-204ENST00000546697 SLKQ9H2G2 1235 aaPredicted RBP17.45■□□□□ 0.38
SSH1-204ENST00000546697 SMARCAD1Q9H4L7 1026 aa17.45■□□□□ 0.38
SSH1-204ENST00000546697 TRIP12Q14669 1992 aaPredicted RBP17.45■□□□□ 0.38
SSH1-204ENST00000546697 TET1Q8NFU7 2136 aa17.45■□□□□ 0.38
SSH1-204ENST00000546697 SORBS3O60504 671 aa17.44■□□□□ 0.38
SSH1-204ENST00000546697 RBM25P49756 843 aaKnown RBP17.44■□□□□ 0.38
SSH1-204ENST00000546697 ACTR2P61160 394 aa17.44■□□□□ 0.38
SSH1-204ENST00000546697 ZNF200P98182 395 aaPredicted RBP17.44■□□□□ 0.38
SSH1-204ENST00000546697 ME3Q16798 604 aa17.44■□□□□ 0.38
SSH1-204ENST00000546697 FAM26DQ5JW98 314 aa17.44■□□□□ 0.38
SSH1-204ENST00000546697 ABHD15Q6UXT9 468 aa17.44■□□□□ 0.38
SSH1-204ENST00000546697 PHOSPHO2Q8TCD6 241 aa17.44■□□□□ 0.38
SSH1-204ENST00000546697 SDF4Q9BRK5 362 aa17.44■□□□□ 0.38
SSH1-204ENST00000546697 LARP6Q9BRS8 491 aaKnown RBP17.44■□□□□ 0.38
SSH1-204ENST00000546697 TBC1D22BQ9NU19 505 aa17.44■□□□□ 0.38
SSH1-204ENST00000546697 TRANK1O15050 2925 aa17.44■□□□□ 0.38
SSH1-204ENST00000546697 IPO5O00410 1097 aaKnown RBP17.43■□□□□ 0.38
SSH1-204ENST00000546697 NBNO60934 754 aa17.43■□□□□ 0.38
SSH1-204ENST00000546697 CCNE2O96020 404 aa17.43■□□□□ 0.38
SSH1-204ENST00000546697 RPLP2P05387 115 aaKnown RBP17.43■□□□□ 0.38
SSH1-204ENST00000546697 MBTPS1Q14703 1052 aa17.43■□□□□ 0.38
SSH1-204ENST00000546697 PLA2G4DQ86XP0 818 aa17.43■□□□□ 0.38
SSH1-204ENST00000546697 BLIDQ8IZY5 108 aa17.43■□□□□ 0.38
SSH1-204ENST00000546697 LMBR1Q8WVP7 490 aa17.43■□□□□ 0.38
SSH1-204ENST00000546697 ATP6V0A1Q93050 837 aa17.43■□□□□ 0.38
SSH1-204ENST00000546697 TTYH1Q9H313 450 aaPredicted RBP17.43■□□□□ 0.38
SSH1-204ENST00000546697 STXBP5LQ9Y2K9 1186 aa17.43■□□□□ 0.38
SSH1-204ENST00000546697 TREHO43280 583 aa17.42■□□□□ 0.38
SSH1-204ENST00000546697 ACTN1P12814 892 aa17.42■□□□□ 0.38
SSH1-204ENST00000546697 FDPSP14324 419 aaKnown RBP17.42■□□□□ 0.38
SSH1-204ENST00000546697 DNAJB2P25686 324 aa17.42■□□□□ 0.38
SSH1-204ENST00000546697 NLRP5P59047 1200 aa17.42■□□□□ 0.38
SSH1-204ENST00000546697 STK3Q13188 491 aa17.42■□□□□ 0.38
SSH1-204ENST00000546697 Q4G0T1 1027 aa17.42■□□□□ 0.38
SSH1-204ENST00000546697 MARCH8Q5T0T0 291 aa17.42■□□□□ 0.38
SSH1-204ENST00000546697 ZNF618Q5T7W0 954 aa17.42■□□□□ 0.38
SSH1-204ENST00000546697 ZNF697Q5TEC3 545 aa17.42■□□□□ 0.38
SSH1-204ENST00000546697 ZNF746Q6NUN9 644 aaPredicted RBP17.42■□□□□ 0.38
SSH1-204ENST00000546697 TAF2Q6P1X5 1199 aa17.42■□□□□ 0.38
SSH1-204ENST00000546697 B3GNT9Q6UX72 402 aa17.42■□□□□ 0.38
SSH1-204ENST00000546697 Q7L0L9 218 aa17.42■□□□□ 0.38
SSH1-204ENST00000546697 RASGRP4Q8TDF6 673 aa17.42■□□□□ 0.38
SSH1-204ENST00000546697 AIFM3Q96NN9 605 aa17.42■□□□□ 0.38
SSH1-204ENST00000546697 GUCD1Q96NT3 240 aa17.42■□□□□ 0.38
SSH1-204ENST00000546697 PBX4Q9BYU1 374 aa17.42■□□□□ 0.38
SSH1-204ENST00000546697 SEMA6BQ9H3T3 888 aa17.42■□□□□ 0.38
SSH1-204ENST00000546697 SETD4Q9NVD3 440 aa17.42■□□□□ 0.38
SSH1-204ENST00000546697 RRN3P2A6NIE6 340 aa17.41■□□□□ 0.38
SSH1-204ENST00000546697 PPFIA3O75145 1194 aa17.41■□□□□ 0.38
SSH1-204ENST00000546697 LARGE1O95461 756 aa17.41■□□□□ 0.38
SSH1-204ENST00000546697 NEK4P51957 841 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms