RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 GRIN2DO15399 1336 aa23.49■■□□□ 1.35
SCARB1-211ENST00000546215 F2P00734 622 aa23.48■■□□□ 1.35
SCARB1-211ENST00000546215 LGALS2P05162 132 aa23.48■■□□□ 1.35
SCARB1-211ENST00000546215 ZNF286BP0CG31 522 aa23.48■■□□□ 1.35
SCARB1-211ENST00000546215 ATN1P54259 1190 aaPredicted RBP23.48■■□□□ 1.35
SCARB1-211ENST00000546215 KRT76Q01546 638 aa23.48■■□□□ 1.35
SCARB1-211ENST00000546215 PKP1Q13835 747 aa23.48■■□□□ 1.35
SCARB1-211ENST00000546215 CALCRLQ16602 461 aa23.48■■□□□ 1.35
SCARB1-211ENST00000546215 VTI1AQ96AJ9 217 aa23.48■■□□□ 1.35
SCARB1-211ENST00000546215 PSMC6P62333 389 aa23.48■■□□□ 1.35
SCARB1-211ENST00000546215 SNX17Q15036 470 aa23.48■■□□□ 1.35
SCARB1-211ENST00000546215 ABHD15Q6UXT9 468 aa23.48■■□□□ 1.35
SCARB1-211ENST00000546215 SLFN12Q8IYM2 578 aa23.48■■□□□ 1.35
SCARB1-211ENST00000546215 C4orf32Q8N8J7 132 aa23.48■■□□□ 1.35
SCARB1-211ENST00000546215 BAG4O95429 457 aaKnown RBP23.47■■□□□ 1.35
SCARB1-211ENST00000546215 C1orf53Q5VUE5 145 aa23.47■■□□□ 1.35
SCARB1-211ENST00000546215 SMAP1Q8IYB5 467 aaPredicted RBP23.47■■□□□ 1.35
SCARB1-211ENST00000546215 PCYT2Q99447 389 aa23.47■■□□□ 1.35
SCARB1-211ENST00000546215 UNC45AQ9H3U1 944 aa23.47■■□□□ 1.35
SCARB1-211ENST00000546215 ZSCAN16Q9H4T2 348 aaPredicted RBP23.47■■□□□ 1.35
SCARB1-211ENST00000546215 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.47■■□□□ 1.35
SCARB1-211ENST00000546215 VAV3Q9UKW4 847 aa23.47■■□□□ 1.35
SCARB1-211ENST00000546215 IGKV6D-21A0A0A0MT36 114 aa23.46■■□□□ 1.35
SCARB1-211ENST00000546215 A0A0U1RQG5 324 aaPredicted RBP23.46■■□□□ 1.35
SCARB1-211ENST00000546215 HAS3O00219 553 aa23.46■■□□□ 1.35
SCARB1-211ENST00000546215 MARCH6O60337 910 aa23.46■■□□□ 1.35
SCARB1-211ENST00000546215 LGR5O75473 907 aa23.46■■□□□ 1.35
SCARB1-211ENST00000546215 ITGA7Q13683 1181 aa23.46■■□□□ 1.35
SCARB1-211ENST00000546215 LRRC26Q2I0M4 334 aa23.46■■□□□ 1.35
SCARB1-211ENST00000546215 UTP14CQ5TAP6 766 aaKnown RBP23.46■■□□□ 1.35
SCARB1-211ENST00000546215 TRIM50Q86XT4 487 aa23.46■■□□□ 1.35
SCARB1-211ENST00000546215 SLC43A3Q8NBI5 491 aa23.46■■□□□ 1.35
SCARB1-211ENST00000546215 TCEAL9Q9UHQ7 104 aa23.46■■□□□ 1.35
SCARB1-211ENST00000546215 TNRC18O15417 2968 aaPredicted RBP23.46■■□□□ 1.35
SCARB1-211ENST00000546215 H3BRB1 525 aa23.45■■□□□ 1.34
SCARB1-211ENST00000546215 SUPT20HL2P0C7V6 817 aa23.45■■□□□ 1.34
SCARB1-211ENST00000546215 ZSCAN22P10073 491 aaPredicted RBP23.45■■□□□ 1.34
SCARB1-211ENST00000546215 ANP32AP39687 249 aaKnown RBP23.45■■□□□ 1.34
SCARB1-211ENST00000546215 CDK7P50613 346 aa23.45■■□□□ 1.34
SCARB1-211ENST00000546215 PPP2R5CQ13362 524 aa23.45■■□□□ 1.34
SCARB1-211ENST00000546215 TUT1Q9H6E5 874 aaKnown RBP23.45■■□□□ 1.34
SCARB1-211ENST00000546215 PCDHA10Q9Y5I2 948 aa23.45■■□□□ 1.34
SCARB1-211ENST00000546215 EMSYQ7Z589 1322 aa23.45■■□□□ 1.34
SCARB1-211ENST00000546215 WDR64B1ANS9 1081 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 ARVCFO00192 962 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 CHMP2AO43633 222 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 PSEN2P49810 448 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 SPIRE1Q08AE8 756 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 PTGDRQ13258 359 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 NBPF20Q3BBV1 942 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 FAM173BQ6P4H8 233 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 KATNAL1Q9BW62 490 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 DISC1Q9NRI5 854 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 PCDHA12Q9UN75 941 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 OR52Z1P0C646 297 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 SFNP31947 248 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 TXKP42681 527 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 MFSD10Q14728 455 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 KIAA0753Q2KHM9 967 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 MIS18BP1Q6P0N0 1132 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 CCDC60Q8IWA6 550 aaPredicted RBP23.44■■□□□ 1.34
SCARB1-211ENST00000546215 HTATIP2Q9BUP3 242 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 SMARCAD1Q9H4L7 1026 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 TTC12Q9H892 705 aaPredicted RBP23.44■■□□□ 1.34
SCARB1-211ENST00000546215 TSHZ2Q9NRE2 1034 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 SAMM50Q9Y512 469 aa23.44■■□□□ 1.34
SCARB1-211ENST00000546215 ALPK3Q96L96 1907 aa23.43■■□□□ 1.34
SCARB1-211ENST00000546215 JAK3P52333 1124 aa23.43■■□□□ 1.34
SCARB1-211ENST00000546215 FOXD4L5Q5VV16 416 aaPredicted RBP23.43■■□□□ 1.34
SCARB1-211ENST00000546215 RDM1Q8NG50 284 aa23.43■■□□□ 1.34
SCARB1-211ENST00000546215 PPP1R13LQ8WUF5 828 aa23.43■■□□□ 1.34
SCARB1-211ENST00000546215 FOXD4L4Q8WXT5 416 aaPredicted RBP23.43■■□□□ 1.34
SCARB1-211ENST00000546215 GLG1Q92896 1179 aa23.43■■□□□ 1.34
SCARB1-211ENST00000546215 ZNF215Q9UL58 517 aaPredicted RBP23.43■■□□□ 1.34
SCARB1-211ENST00000546215 EML1O00423 815 aa23.42■■□□□ 1.34
SCARB1-211ENST00000546215 PSAPP07602 524 aa23.42■■□□□ 1.34
SCARB1-211ENST00000546215 STAT5BP51692 787 aa23.42■■□□□ 1.34
SCARB1-211ENST00000546215 RTP1P59025 263 aa23.42■■□□□ 1.34
SCARB1-211ENST00000546215 CHMP4BP1P59074 171 aa23.42■■□□□ 1.34
SCARB1-211ENST00000546215 SWSAP1Q6NVH7 229 aa23.42■■□□□ 1.34
SCARB1-211ENST00000546215 NFRKBQ6P4R8 1299 aa23.42■■□□□ 1.34
SCARB1-211ENST00000546215 PLPPR4Q7Z2D5 763 aa23.42■■□□□ 1.34
SCARB1-211ENST00000546215 MIER3Q7Z3K6 550 aa23.42■■□□□ 1.34
SCARB1-211ENST00000546215 AFAP1L1Q8TED9 768 aa23.42■■□□□ 1.34
SCARB1-211ENST00000546215 SEZ6LQ9BYH1 1024 aa23.42■■□□□ 1.34
SCARB1-211ENST00000546215 AZI2Q9H6S1 392 aa23.42■■□□□ 1.34
SCARB1-211ENST00000546215 ERAP1Q9NZ08 941 aa23.42■■□□□ 1.34
SCARB1-211ENST00000546215 ZDHHC9Q9Y397 364 aa23.42■■□□□ 1.34
SCARB1-211ENST00000546215 WDR81Q562E7 1941 aa23.41■■□□□ 1.34
SCARB1-211ENST00000546215 LAD1O00515 517 aa23.41■■□□□ 1.34
SCARB1-211ENST00000546215 F13A1P00488 732 aa23.41■■□□□ 1.34
SCARB1-211ENST00000546215 TRIM60Q495X7 471 aa23.41■■□□□ 1.34
SCARB1-211ENST00000546215 ANKRD33Q7Z3H0 272 aa23.41■■□□□ 1.34
SCARB1-211ENST00000546215 RNPEPQ9H4A4 650 aa23.41■■□□□ 1.34
SCARB1-211ENST00000546215 RBM19Q9Y4C8 960 aaKnown RBP23.41■■□□□ 1.34
SCARB1-211ENST00000546215 MAFBQ9Y5Q3 323 aaPredicted RBP23.41■■□□□ 1.34
SCARB1-211ENST00000546215 BACH1O14867 736 aa23.4■■□□□ 1.34
SCARB1-211ENST00000546215 BRD1O95696 1058 aa23.4■■□□□ 1.34
SCARB1-211ENST00000546215 ATP2C1P98194 919 aaPredicted RBP23.4■■□□□ 1.34
SCARB1-211ENST00000546215 SESTD1Q86VW0 696 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms