RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 IL2RAP01589 272 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 SYN1P17600 705 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 ADCYAP1R1P41586 468 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 MAGEA10P43363 369 aaPredicted RBP8.93□□□□□ -0.98
SNHG1-223ENST00000545440 ALDH5A1P51649 535 aaPredicted RBP8.93□□□□□ -0.98
SNHG1-223ENST00000545440 GJA9P57773 515 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 RPS6P62753 249 aaKnown RBP8.93□□□□□ -0.98
SNHG1-223ENST00000545440 CENPCQ03188 943 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 BAATQ14032 418 aaPredicted RBP8.93□□□□□ -0.98
SNHG1-223ENST00000545440 CTC1Q2NKJ3 1217 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 TRIM60Q495X7 471 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 CCSAPQ6IQ19 270 aaPredicted RBP8.93□□□□□ -0.98
SNHG1-223ENST00000545440 STOX1Q6ZVD7 989 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 MB21D2Q8IYB1 491 aaPredicted RBP8.93□□□□□ -0.98
SNHG1-223ENST00000545440 ADGRF4Q8IZF3 695 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 PCSK9Q8NBP7 692 aaKnown RBP8.93□□□□□ -0.98
SNHG1-223ENST00000545440 RGS22Q8NE09 1264 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 DNERQ8NFT8 737 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 COL26A1Q96A83 441 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 MPHOSPH6Q99547 160 aaKnown RBP8.93□□□□□ -0.98
SNHG1-223ENST00000545440 MTA3Q9BTC8 594 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 NIFKQ9BYG3 293 aaKnown RBP8.93□□□□□ -0.98
SNHG1-223ENST00000545440 LSG1Q9H089 658 aaKnown RBP8.93□□□□□ -0.98
SNHG1-223ENST00000545440 CPVLQ9H3G5 476 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 SPC25Q9HBM1 224 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 PRKAG2Q9UGJ0 569 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 WDR81Q562E7 1941 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 SZT2Q5T011 3432 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 MROH7Q68CQ1 1323 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 MYADML2A6NDP7 307 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 IFIT3O14879 490 aaKnown RBP8.92□□□□□ -0.98
SNHG1-223ENST00000545440 DHX16O60231 1041 aaKnown RBP8.92□□□□□ -0.98
SNHG1-223ENST00000545440 GFRA3O60609 400 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 LGR5O75473 907 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 C6orf222P0C671 652 aaPredicted RBP8.92□□□□□ -0.98
SNHG1-223ENST00000545440 ACLYP53396 1101 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 TNFAIP2Q03169 654 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 GRM4Q14833 912 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 WTAPQ15007 396 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 QRICH1Q2TAL8 776 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 USH1GQ495M9 461 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 TRIM67Q6ZTA4 783 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 TLK2Q86UE8 772 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 FBXO16Q8IX29 292 aaPredicted RBP8.92□□□□□ -0.98
SNHG1-223ENST00000545440 LINC00528Q8N1L1 170 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 NUP133Q8WUM0 1156 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 FERMT2Q96AC1 680 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 MTMR8Q96EF0 704 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 UBA5Q9GZZ9 404 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 TSPAN10Q9H1Z9 355 aaPredicted RBP8.92□□□□□ -0.98
SNHG1-223ENST00000545440 STARD7Q9NQZ5 370 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 MAD2L2Q9UI95 211 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 ATP11BQ9Y2G3 1177 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 Q9Y3F1 56 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 TAF6LQ9Y6J9 622 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 SCN5AQ14524 2016 aa8.92□□□□□ -0.98
SNHG1-223ENST00000545440 ELP1O95163 1332 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.91□□□□□ -0.98
SNHG1-223ENST00000545440 SERTM1A2A2V5 107 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 B4DLN1 442 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 KLRF2D3W0D1 207 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 CTAGE5O15320 804 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 DDAH1O94760 285 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 STAU1O95793 577 aaKnown RBP8.91□□□□□ -0.98
SNHG1-223ENST00000545440 EDNRBP24530 442 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 CALML3P27482 149 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 MRPL12P52815 198 aaKnown RBP8.91□□□□□ -0.98
SNHG1-223ENST00000545440 ANTXR2P58335 489 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 GHRHRQ02643 423 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 TROAPQ12815 778 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 KCNA10Q16322 511 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 OCLNQ16625 522 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 IQSEC1Q6DN90 963 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 TAPT1Q6NXT6 567 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 CASC1Q6TDU7 716 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 TAS1R3Q7RTX0 852 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 ANKRD33Q7Z3H0 272 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 FBXO11Q86XK2 927 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 MCF2L2Q86YR7 1114 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 TDHQ8IZJ6 230 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 STAG2Q8N3U4 1231 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 CCDC136Q96JN2 1154 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 GLT1D1Q96MS3 346 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 TOX2Q96NM4 488 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 PURBQ96QR8 312 aaKnown RBP8.91□□□□□ -0.98
SNHG1-223ENST00000545440 LBHD1Q9BQE6 289 aaPredicted RBP8.91□□□□□ -0.98
SNHG1-223ENST00000545440 MKNK1Q9BUB5 465 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 AMNQ9BXJ7 453 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 JMJD4Q9H9V9 463 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 ANO2Q9NQ90 1003 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 PDLIM7Q9NR12 457 aa8.91□□□□□ -0.98
SNHG1-223ENST00000545440 RBM47A0AV96 593 aaKnown RBP8.9□□□□□ -0.98
SNHG1-223ENST00000545440 NRG2O14511 850 aaPredicted RBP8.9□□□□□ -0.98
SNHG1-223ENST00000545440 SLC27A2O14975 620 aa8.9□□□□□ -0.98
SNHG1-223ENST00000545440 ZBTB5O15062 677 aa8.9□□□□□ -0.98
SNHG1-223ENST00000545440 CDC45O75419 566 aa8.9□□□□□ -0.98
SNHG1-223ENST00000545440 ASGR1P07306 291 aa8.9□□□□□ -0.98
SNHG1-223ENST00000545440 CLTBP09497 229 aa8.9□□□□□ -0.98
SNHG1-223ENST00000545440 MCM5P33992 734 aa8.9□□□□□ -0.98
SNHG1-223ENST00000545440 TLE2Q04725 743 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms