RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 TRIM59Q8IWR1 403 aa25.64■■□□□ 1.7
FOXA1-202ENST00000545425 MXD3Q9BW11 206 aa25.64■■□□□ 1.7
FOXA1-202ENST00000545425 TSPYL1Q9H0U9 437 aa25.64■■□□□ 1.7
FOXA1-202ENST00000545425 MYH7BA7E2Y1 1941 aa25.64■■□□□ 1.69
FOXA1-202ENST00000545425 PLA2G4BP0C869 781 aa25.63■■□□□ 1.69
FOXA1-202ENST00000545425 ACTN2P35609 894 aa25.63■■□□□ 1.69
FOXA1-202ENST00000545425 UBE2SQ16763 222 aa25.63■■□□□ 1.69
FOXA1-202ENST00000545425 CDC42EP5Q6NZY7 148 aa25.63■■□□□ 1.69
FOXA1-202ENST00000545425 KCNK18Q7Z418 384 aa25.63■■□□□ 1.69
FOXA1-202ENST00000545425 CCDC102AQ96A19 550 aa25.63■■□□□ 1.69
FOXA1-202ENST00000545425 NUDT12Q9BQG2 462 aa25.63■■□□□ 1.69
FOXA1-202ENST00000545425 PCDHA2Q9Y5H9 948 aa25.63■■□□□ 1.69
FOXA1-202ENST00000545425 PPIP5K2O43314 1243 aa25.63■■□□□ 1.69
FOXA1-202ENST00000545425 ZDHHC15Q96MV8 337 aa25.63■■□□□ 1.69
FOXA1-202ENST00000545425 TANGO6Q9C0B7 1094 aa25.63■■□□□ 1.69
FOXA1-202ENST00000545425 LRRIQ3A6PVS8 624 aaPredicted RBP25.62■■□□□ 1.69
FOXA1-202ENST00000545425 BTNL10A8MVZ5 291 aa25.62■■□□□ 1.69
FOXA1-202ENST00000545425 USP17L10C9JJH3 530 aa25.62■■□□□ 1.69
FOXA1-202ENST00000545425 TFRCP02786 760 aaKnown RBP25.62■■□□□ 1.69
FOXA1-202ENST00000545425 HNRNPH2P55795 449 aaKnown RBP25.62■■□□□ 1.69
FOXA1-202ENST00000545425 EIF6P56537 245 aaKnown RBP25.62■■□□□ 1.69
FOXA1-202ENST00000545425 Q4G0T1 1027 aa25.62■■□□□ 1.69
FOXA1-202ENST00000545425 L3MBTL3Q96JM7 780 aaPredicted RBP25.62■■□□□ 1.69
FOXA1-202ENST00000545425 CAPZA3Q96KX2 299 aa25.62■■□□□ 1.69
FOXA1-202ENST00000545425 OSBPL9Q96SU4 736 aa25.62■■□□□ 1.69
FOXA1-202ENST00000545425 CRACR2AQ9BSW2 395 aa25.62■■□□□ 1.69
FOXA1-202ENST00000545425 HPCAL4Q9UM19 191 aa25.62■■□□□ 1.69
FOXA1-202ENST00000545425 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.62■■□□□ 1.69
FOXA1-202ENST00000545425 IQCA1LA6NCM1 817 aa25.61■■□□□ 1.69
FOXA1-202ENST00000545425 CETN3O15182 167 aa25.61■■□□□ 1.69
FOXA1-202ENST00000545425 SRGAP2O75044 1071 aa25.61■■□□□ 1.69
FOXA1-202ENST00000545425 FSTL1Q12841 308 aa25.61■■□□□ 1.69
FOXA1-202ENST00000545425 NIM1KQ8IY84 436 aa25.61■■□□□ 1.69
FOXA1-202ENST00000545425 CERS5Q8N5B7 392 aa25.61■■□□□ 1.69
FOXA1-202ENST00000545425 FAM20AQ96MK3 541 aa25.61■■□□□ 1.69
FOXA1-202ENST00000545425 ANO3Q9BYT9 981 aa25.61■■□□□ 1.69
FOXA1-202ENST00000545425 AIPL1Q9NZN9 384 aa25.61■■□□□ 1.69
FOXA1-202ENST00000545425 BZW2Q9Y6E2 419 aaKnown RBP25.61■■□□□ 1.69
FOXA1-202ENST00000545425 A0A0U1RQG5 324 aaPredicted RBP25.6■■□□□ 1.69
FOXA1-202ENST00000545425 POTECB2RU33 542 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 EPHB6O15197 1021 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 LMAN1P49257 510 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 KCNMA1Q12791 1236 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 ZSCAN26Q16670 478 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 CCDC181Q5TID7 509 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 HGSNATQ68CP4 663 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 PODNQ7Z5L7 613 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 GPC2Q8N158 579 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 EEF2KMTQ96G04 330 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 ZNF541Q9H0D2 1346 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 GRID2IPA4D2P6 1211 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 PLEKP08567 350 aaPredicted RBP25.6■■□□□ 1.69
FOXA1-202ENST00000545425 MMP14P50281 582 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 NNTQ13423 1086 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 QRICH1Q2TAL8 776 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 FAM83BQ5T0W9 1011 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 APOBEC3HQ6NTF7 200 aaKnown RBP25.6■■□□□ 1.69
FOXA1-202ENST00000545425 KRT26Q7Z3Y9 468 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 FRMD5Q7Z6J6 570 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 GPBP1Q86WP2 473 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 IDI2Q9BXS1 227 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 KCTD10Q9H3F6 313 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 EMILIN3Q9NT22 766 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 FAN1Q9Y2M0 1017 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 CAPN6Q9Y6Q1 641 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 DUSP10Q9Y6W6 482 aa25.6■■□□□ 1.69
FOXA1-202ENST00000545425 CES2O00748 559 aa25.59■■□□□ 1.69
FOXA1-202ENST00000545425 HSPA6P17066 643 aa25.59■■□□□ 1.69
FOXA1-202ENST00000545425 CYP11B2P19099 503 aa25.59■■□□□ 1.69
FOXA1-202ENST00000545425 TNNT3P45378 269 aaPredicted RBP25.59■■□□□ 1.69
FOXA1-202ENST00000545425 ECM1Q16610 540 aa25.59■■□□□ 1.69
FOXA1-202ENST00000545425 AOC3Q16853 763 aa25.59■■□□□ 1.69
FOXA1-202ENST00000545425 TTBK2Q6IQ55 1244 aa25.59■■□□□ 1.69
FOXA1-202ENST00000545425 EMBQ6PCB8 327 aa25.59■■□□□ 1.69
FOXA1-202ENST00000545425 GMCL1P1Q8NEA9 526 aa25.59■■□□□ 1.69
FOXA1-202ENST00000545425 SPATA4Q8NEY3 305 aa25.59■■□□□ 1.69
FOXA1-202ENST00000545425 AENQ8WTP8 325 aaKnown RBP25.59■■□□□ 1.69
FOXA1-202ENST00000545425 CRYGNQ8WXF5 182 aa25.59■■□□□ 1.69
FOXA1-202ENST00000545425 PLCB1Q9NQ66 1216 aa25.59■■□□□ 1.69
FOXA1-202ENST00000545425 PI4KBQ9UBF8 816 aa25.59■■□□□ 1.69
FOXA1-202ENST00000545425 KIAA1024Q9UPX6 916 aa25.59■■□□□ 1.69
FOXA1-202ENST00000545425 TRAF3IP3Q9Y228 551 aa25.59■■□□□ 1.69
FOXA1-202ENST00000545425 PCDHA1Q9Y5I3 950 aa25.59■■□□□ 1.69
FOXA1-202ENST00000545425 WDR90Q96KV7 1748 aa25.59■■□□□ 1.69
FOXA1-202ENST00000545425 PDE2AO00408 941 aaPredicted RBP25.58■■□□□ 1.69
FOXA1-202ENST00000545425 MPHOSPH10O00566 681 aaKnown RBP25.58■■□□□ 1.69
FOXA1-202ENST00000545425 SLC1A4P43007 532 aa25.58■■□□□ 1.69
FOXA1-202ENST00000545425 HERC4Q5GLZ8 1057 aaPredicted RBP25.58■■□□□ 1.69
FOXA1-202ENST00000545425 SMC1BQ8NDV3 1235 aa25.58■■□□□ 1.69
FOXA1-202ENST00000545425 AMNQ9BXJ7 453 aa25.58■■□□□ 1.69
FOXA1-202ENST00000545425 TFR2Q9UP52 801 aa25.58■■□□□ 1.69
FOXA1-202ENST00000545425 MOCS3O95396 460 aa25.58■■□□□ 1.68
FOXA1-202ENST00000545425 SLC12A3P55017 1021 aa25.58■■□□□ 1.68
FOXA1-202ENST00000545425 CFAP221Q4G0U5 840 aa25.58■■□□□ 1.68
FOXA1-202ENST00000545425 SLFN13Q68D06 897 aa25.58■■□□□ 1.68
FOXA1-202ENST00000545425 TMEM179Q6ZVK1 233 aa25.58■■□□□ 1.68
FOXA1-202ENST00000545425 GMCL1Q96IK5 515 aa25.58■■□□□ 1.68
FOXA1-202ENST00000545425 SUGCTQ9HAC7 445 aa25.58■■□□□ 1.68
FOXA1-202ENST00000545425 RPA1P27694 616 aa25.57■■□□□ 1.68
FOXA1-202ENST00000545425 CIITAP33076 1130 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms