RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 UBA7P41226 1012 aa10.71□□□□□ -0.69
YBX3-215ENST00000544504 TXKP42681 527 aa10.71□□□□□ -0.69
YBX3-215ENST00000544504 FAM160A1Q05DH4 1040 aa10.71□□□□□ -0.69
YBX3-215ENST00000544504 MTMR1Q13613 665 aa10.71□□□□□ -0.69
YBX3-215ENST00000544504 GRIN2CQ14957 1233 aa10.71□□□□□ -0.69
YBX3-215ENST00000544504 RESP18Q5W5W9 173 aa10.71□□□□□ -0.69
YBX3-215ENST00000544504 KCTD17Q8N5Z5 321 aa10.71□□□□□ -0.69
YBX3-215ENST00000544504 FSIP1Q8NA03 581 aa10.71□□□□□ -0.69
YBX3-215ENST00000544504 ERMNQ8TAM6 284 aa10.71□□□□□ -0.69
YBX3-215ENST00000544504 MORC4Q8TE76 937 aa10.71□□□□□ -0.69
YBX3-215ENST00000544504 INPP4AQ96PE3 977 aaPredicted RBP10.71□□□□□ -0.69
YBX3-215ENST00000544504 ASB2Q96Q27 587 aa10.71□□□□□ -0.69
YBX3-215ENST00000544504 RIT2Q99578 217 aa10.71□□□□□ -0.69
YBX3-215ENST00000544504 TMEM60Q9H2L4 133 aa10.71□□□□□ -0.69
YBX3-215ENST00000544504 TTC12Q9H892 705 aaPredicted RBP10.71□□□□□ -0.69
YBX3-215ENST00000544504 PRDM5Q9NQX1 630 aaPredicted RBP10.71□□□□□ -0.69
YBX3-215ENST00000544504 TBC1D22BQ9NU19 505 aa10.71□□□□□ -0.69
YBX3-215ENST00000544504 DDX19AQ9NUU7 478 aaKnown RBP10.71□□□□□ -0.69
YBX3-215ENST00000544504 USP25Q9UHP3 1055 aa10.71□□□□□ -0.69
YBX3-215ENST00000544504 HOOK1Q9UJC3 728 aaKnown RBP10.71□□□□□ -0.69
YBX3-215ENST00000544504 CHD9Q3L8U1 2897 aa10.71□□□□□ -0.7
YBX3-215ENST00000544504 FAM237AA0A1B0GTK4 181 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 SOWAHBA6NEL2 793 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 IPO5O00410 1097 aaKnown RBP10.7□□□□□ -0.7
YBX3-215ENST00000544504 EDIL3O43854 480 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 PEX10O60683 326 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 GAS7O60861 476 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 KINO60870 393 aaKnown RBP10.7□□□□□ -0.7
YBX3-215ENST00000544504 GADD45BO75293 160 aaPredicted RBP10.7□□□□□ -0.7
YBX3-215ENST00000544504 HOXC6P09630 235 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 CNGA1P29973 690 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 ICAM3P32942 547 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 MRPS9P82933 396 aaKnown RBP10.7□□□□□ -0.7
YBX3-215ENST00000544504 CNTN2Q02246 1040 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 MAP2K5Q13163 448 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 ZNF792Q3KQV3 632 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 LRCH2Q5VUJ6 765 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 HAUS3Q68CZ6 603 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 SLC39A5Q6ZMH5 540 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 IGSF22Q8N9C0 903 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 ARRDC4Q8NCT1 418 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 IL31RAQ8NI17 732 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 ETNPPLQ8TBG4 499 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 ADAMTS19Q8TE59 1207 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 SLC5A5Q92911 643 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 LENG9Q96B70 501 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 RNPC3Q96LT9 517 aaKnown RBP10.7□□□□□ -0.7
YBX3-215ENST00000544504 ZNF577Q9BSK1 485 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 TEKT3Q9BXF9 490 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 CSRNP2Q9H175 543 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 KCNH7Q9NS40 1196 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 LRWD1Q9UFC0 647 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 CCDC39Q9UFE4 941 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 ARIH1Q9Y4X5 557 aaPredicted RBP10.7□□□□□ -0.7
YBX3-215ENST00000544504 LTBP2Q14767 1821 aa10.7□□□□□ -0.7
YBX3-215ENST00000544504 SYNGAP1Q96PV0 1343 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 KDM3AQ9Y4C1 1321 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 MSH4O15457 936 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 LETM1O95202 739 aaPredicted RBP10.69□□□□□ -0.7
YBX3-215ENST00000544504 PGK2P07205 417 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 ITGB5P18084 799 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 SYKP43405 635 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 SNX17Q15036 470 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 KRT79Q5XKE5 535 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 KANK3Q6NY19 840 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 SHC4Q6S5L8 630 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 RDM1Q8NG50 284 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 RASSF8Q8NHQ8 419 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 NEK9Q8TD19 979 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 HAS1Q92839 578 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 CALML4Q96GE6 196 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 CDK5RAP3Q96JB5 506 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 TIGD1Q96MW7 591 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 CLIC6Q96NY7 704 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 UHRF1Q96T88 793 aaPredicted RBP10.69□□□□□ -0.7
YBX3-215ENST00000544504 SENP7Q9BQF6 1050 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 SDF4Q9BRK5 362 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 C1QTNF1Q9BXJ1 281 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 CCSER1Q9C0I3 900 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 NT5C3AQ9H0P0 336 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 CUEDC2Q9H467 287 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 AGO4Q9HCK5 861 aaKnown RBP10.69□□□□□ -0.7
YBX3-215ENST00000544504 VTA1Q9NP79 307 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 PDLIM7Q9NR12 457 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 THEGQ9P2T0 379 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 KCNH3Q9ULD8 1083 aa10.69□□□□□ -0.7
YBX3-215ENST00000544504 NFASCO94856 1347 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 SPATA31C2B4DYI2 1134 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 KBTBD13C9JR72 458 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 CTAGE5O15320 804 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 PFKFB1P16118 471 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 MUTP22033 750 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 DNAJB2P25686 324 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 SFNP31947 248 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 TECP42680 631 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 MRPS5P82675 430 aaKnown RBP10.68□□□□□ -0.7
YBX3-215ENST00000544504 KRT76Q01546 638 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 PPP2R5CQ13362 524 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 NEDD9Q14511 834 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 TRIM60Q495X7 471 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms