RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 ANKRD45Q5TZF3 282 aa11.03□□□□□ -0.64
C2CD3-220ENST00000544293 KCNV1Q6PIU1 500 aa11.03□□□□□ -0.64
C2CD3-220ENST00000544293 SPPL3Q8TCT6 385 aa11.03□□□□□ -0.64
C2CD3-220ENST00000544293 LMBR1Q8WVP7 490 aa11.03□□□□□ -0.64
C2CD3-220ENST00000544293 LMAN2LQ9H0V9 348 aa11.03□□□□□ -0.64
C2CD3-220ENST00000544293 IGFLR1Q9H665 355 aa11.03□□□□□ -0.64
C2CD3-220ENST00000544293 AGO3Q9H9G7 860 aaKnown RBP11.03□□□□□ -0.64
C2CD3-220ENST00000544293 MLXIPQ9HAP2 919 aa11.03□□□□□ -0.64
C2CD3-220ENST00000544293 MAP3K20Q9NYL2 800 aaKnown RBP11.03□□□□□ -0.64
C2CD3-220ENST00000544293 FAM50BQ9Y247 325 aa11.03□□□□□ -0.64
C2CD3-220ENST00000544293 COL4A6Q14031 1691 aa11.03□□□□□ -0.64
C2CD3-220ENST00000544293 CACNA1HO95180 2353 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 TMEM221A6NGB7 291 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 M0R296 226 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 STXBP3O00186 592 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 ZNF213O14771 459 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 ZBTB5O15062 677 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 DGKIO75912 1065 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 GLP2RO95838 553 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 MMP1P03956 469 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 ITGB1P05556 798 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 GHRP10912 638 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 SDSP20132 328 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 RRP1P56182 461 aaKnown RBP11.02□□□□□ -0.65
C2CD3-220ENST00000544293 ZXDAP98168 799 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 RBM10P98175 930 aaKnown RBP11.02□□□□□ -0.65
C2CD3-220ENST00000544293 MARCH8Q5T0T0 291 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 METTL7BQ6UX53 244 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 CYFIP1Q7L576 1253 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 TICAM2Q86XR7 235 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 APBB2Q92870 758 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 ASIC4Q96FT7 647 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 INPP4AQ96PE3 977 aaPredicted RBP11.02□□□□□ -0.65
C2CD3-220ENST00000544293 USP26Q9BXU7 913 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 IL25Q9H293 177 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 RNF41Q9H4P4 317 aaPredicted RBP11.02□□□□□ -0.65
C2CD3-220ENST00000544293 RIOX1Q9H6W3 641 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 KAT14Q9H8E8 782 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 SENP2Q9HC62 589 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 RTEL1Q9NZ71 1219 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 CD207Q9UJ71 328 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 PCDHGC5Q9Y5F6 944 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 PCDHA1Q9Y5I3 950 aa11.02□□□□□ -0.65
C2CD3-220ENST00000544293 SIP14410 1827 aa11.01□□□□□ -0.65
C2CD3-220ENST00000544293 KLRF2D3W0D1 207 aa11.01□□□□□ -0.65
C2CD3-220ENST00000544293 ATP9AO75110 1047 aa11.01□□□□□ -0.65
C2CD3-220ENST00000544293 CSPG5O95196 566 aa11.01□□□□□ -0.65
C2CD3-220ENST00000544293 VCPP55072 806 aaKnown RBP11.01□□□□□ -0.65
C2CD3-220ENST00000544293 COASYQ13057 564 aa11.01□□□□□ -0.65
C2CD3-220ENST00000544293 CYB5R4Q7L1T6 521 aa11.01□□□□□ -0.65
C2CD3-220ENST00000544293 FCHSD1Q86WN1 690 aa11.01□□□□□ -0.65
C2CD3-220ENST00000544293 PLCD3Q8N3E9 789 aa11.01□□□□□ -0.65
C2CD3-220ENST00000544293 SAMD3Q8N6K7 520 aa11.01□□□□□ -0.65
C2CD3-220ENST00000544293 SMRP1Q8NCR6 262 aa11.01□□□□□ -0.65
C2CD3-220ENST00000544293 VN1R2Q8NFZ6 395 aa11.01□□□□□ -0.65
C2CD3-220ENST00000544293 PBXIP1Q96AQ6 731 aa11.01□□□□□ -0.65
C2CD3-220ENST00000544293 ZBTB10Q96DT7 871 aa11.01□□□□□ -0.65
C2CD3-220ENST00000544293 PIGSQ96S52 555 aa11.01□□□□□ -0.65
C2CD3-220ENST00000544293 C11orf84Q9BUA3 381 aaPredicted RBP11.01□□□□□ -0.65
C2CD3-220ENST00000544293 MRPL42Q9Y6G3 142 aaKnown RBP11.01□□□□□ -0.65
C2CD3-220ENST00000544293 TRIOO75962 3097 aa11.01□□□□□ -0.65
C2CD3-220ENST00000544293 FRMPD4Q14CM0 1322 aa11.01□□□□□ -0.65
C2CD3-220ENST00000544293 ADGRA3Q8IWK6 1321 aa11.01□□□□□ -0.65
C2CD3-220ENST00000544293 USP34Q70CQ2 3546 aa11.01□□□□□ -0.65
C2CD3-220ENST00000544293 C5orf42Q9H799 3197 aa11□□□□□ -0.65
C2CD3-220ENST00000544293 MBLAC1A4D2B0 266 aaPredicted RBP11□□□□□ -0.65
C2CD3-220ENST00000544293 GCOM1H8Y6P7 765 aaPredicted RBP11□□□□□ -0.65
C2CD3-220ENST00000544293 POLR2MP0CAP2 368 aa11□□□□□ -0.65
C2CD3-220ENST00000544293 CCND2P30279 289 aa11□□□□□ -0.65
C2CD3-220ENST00000544293 ARHGAP4P98171 946 aa11□□□□□ -0.65
C2CD3-220ENST00000544293 CCDC178Q5BJE1 867 aa11□□□□□ -0.65
C2CD3-220ENST00000544293 FBXO47Q5MNV8 452 aa11□□□□□ -0.65
C2CD3-220ENST00000544293 IQCA1Q86XH1 822 aa11□□□□□ -0.65
C2CD3-220ENST00000544293 EFHBQ8N7U6 833 aa11□□□□□ -0.65
C2CD3-220ENST00000544293 PLVAPQ9BX97 442 aa11□□□□□ -0.65
C2CD3-220ENST00000544293 FAM86C1Q9NVL1 165 aa11□□□□□ -0.65
C2CD3-220ENST00000544293 ZDBF2Q9HCK1 2354 aa11□□□□□ -0.65
C2CD3-220ENST00000544293 GSTTP1A0A1W2PQM5 241 aa10.99□□□□□ -0.65
C2CD3-220ENST00000544293 DHX16O60231 1041 aaKnown RBP10.99□□□□□ -0.65
C2CD3-220ENST00000544293 ST18O60284 1047 aa10.99□□□□□ -0.65
C2CD3-220ENST00000544293 GATMP50440 423 aa10.99□□□□□ -0.65
C2CD3-220ENST00000544293 PTPN5P54829 565 aa10.99□□□□□ -0.65
C2CD3-220ENST00000544293 KCNC3Q14003 757 aa10.99□□□□□ -0.65
C2CD3-220ENST00000544293 BTG3Q14201 252 aaPredicted RBP10.99□□□□□ -0.65
C2CD3-220ENST00000544293 NEDD9Q14511 834 aa10.99□□□□□ -0.65
C2CD3-220ENST00000544293 UTP14CQ5TAP6 766 aaKnown RBP10.99□□□□□ -0.65
C2CD3-220ENST00000544293 FBXL6Q8N531 539 aa10.99□□□□□ -0.65
C2CD3-220ENST00000544293 KLHL23Q8NBE8 558 aa10.99□□□□□ -0.65
C2CD3-220ENST00000544293 ATP8B4Q8TF62 1192 aa10.99□□□□□ -0.65
C2CD3-220ENST00000544293 DNAJB3Q8WWF6 145 aa10.99□□□□□ -0.65
C2CD3-220ENST00000544293 SUSD6Q92537 303 aa10.99□□□□□ -0.65
C2CD3-220ENST00000544293 P2RX5Q93086 422 aa10.99□□□□□ -0.65
C2CD3-220ENST00000544293 POP1Q99575 1024 aaKnown RBP10.99□□□□□ -0.65
C2CD3-220ENST00000544293 BARX2Q9UMQ3 279 aaPredicted RBP10.99□□□□□ -0.65
C2CD3-220ENST00000544293 NRCAMQ92823 1304 aa10.99□□□□□ -0.65
C2CD3-220ENST00000544293 ZFHX2Q9C0A1 2572 aaPredicted RBP10.99□□□□□ -0.65
C2CD3-220ENST00000544293 MICAL3Q7RTP6 2002 aa10.99□□□□□ -0.65
C2CD3-220ENST00000544293 TRIM6-TRIM34B2RNG4 842 aa10.98□□□□□ -0.65
C2CD3-220ENST00000544293 PDGFBP01127 241 aaPredicted RBP10.98□□□□□ -0.65
C2CD3-220ENST00000544293 PRR29P0C7W0 189 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms