RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 RIPK1Q13546 671 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 LRRC41Q15345 812 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 INF2Q27J81 1249 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 TSC22D3Q99576 134 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 TRIM51Q9BSJ1 452 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 CNOT10Q9H9A5 744 aaKnown RBP13.84□□□□□ -0.19
SMG8-202ENST00000543872 LMCD1Q9NZU5 365 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 TBX22Q9Y458 520 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 A0A0G2JS52 829 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 SCG2P13521 617 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 ABL2P42684 1182 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 PRPF4BQ13523 1007 aaKnown RBP13.83□□□□□ -0.2
SMG8-202ENST00000543872 LRRC14Q15048 493 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 MAN2A1Q16706 1144 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 CCDC38Q502W7 563 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 HGSNATQ68CP4 663 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 TMC3Q7Z5M5 1100 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 SLC17A8Q8NDX2 589 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 ZNF317Q96PQ6 595 aaPredicted RBP13.83□□□□□ -0.2
SMG8-202ENST00000543872 TRIM9Q9C026 710 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 KBTBD4Q9NVX7 518 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 NMT2O60551 498 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 GNAT1P11488 350 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 NEFHP12036 1026 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 KIF5BP33176 963 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 PCK1P35558 622 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 ZNF268Q14587 947 aaPredicted RBP13.83□□□□□ -0.2
SMG8-202ENST00000543872 ASTE1Q2TB18 679 aaPredicted RBP13.83□□□□□ -0.2
SMG8-202ENST00000543872 CABP7Q86V35 215 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 AZI2Q9H6S1 392 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 HOMER3Q9NSC5 361 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 MYH7BA7E2Y1 1941 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 LTN1O94822 1766 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 CYP27B1O15528 508 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 GSTA1P08263 222 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 CCND1P24385 295 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 PRPHP41219 470 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 RANBP1P43487 201 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 NCALDP61601 193 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 MXRA7P84157 204 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 KLHL30Q0D2K2 578 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 ARL6IP4Q66PJ3 421 aaKnown RBP13.83□□□□□ -0.2
SMG8-202ENST00000543872 DAAM2Q86T65 1068 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 ANKS1AQ92625 1134 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 LSM14BQ9BX40 385 aaKnown RBP13.83□□□□□ -0.2
SMG8-202ENST00000543872 MLXIPLQ9NP71 852 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 ZFATQ9P243 1243 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 ABCF2Q9UG63 623 aa13.83□□□□□ -0.2
SMG8-202ENST00000543872 ARHGAP23Q9P227 1491 aa13.82□□□□□ -0.2
SMG8-202ENST00000543872 ABCC12Q96J65 1359 aa13.82□□□□□ -0.2
SMG8-202ENST00000543872 FAM205AQ6ZU69 1335 aa13.82□□□□□ -0.2
SMG8-202ENST00000543872 TLR2O60603 784 aa13.82□□□□□ -0.2
SMG8-202ENST00000543872 FAM163BP0C2L3 166 aa13.82□□□□□ -0.2
SMG8-202ENST00000543872 BLMHQ13867 455 aa13.82□□□□□ -0.2
SMG8-202ENST00000543872 C4orf32Q8N8J7 132 aa13.82□□□□□ -0.2
SMG8-202ENST00000543872 FAM133AQ8N9E0 248 aa13.82□□□□□ -0.2
SMG8-202ENST00000543872 NOC2LQ9Y3T9 749 aaKnown RBP13.82□□□□□ -0.2
SMG8-202ENST00000543872 RGS16O15492 202 aaPredicted RBP13.82□□□□□ -0.2
SMG8-202ENST00000543872 ATP2A2P16615 1042 aaKnown RBP13.82□□□□□ -0.2
SMG8-202ENST00000543872 COPB2P35606 906 aa13.82□□□□□ -0.2
SMG8-202ENST00000543872 TRAPPC10P48553 1259 aa13.82□□□□□ -0.2
SMG8-202ENST00000543872 LACTBP83111 547 aaPredicted RBP13.82□□□□□ -0.2
SMG8-202ENST00000543872 RASGRF1Q13972 1273 aa13.82□□□□□ -0.2
SMG8-202ENST00000543872 FAM83BQ5T0W9 1011 aa13.82□□□□□ -0.2
SMG8-202ENST00000543872 TMTC3Q6ZXV5 915 aa13.82□□□□□ -0.2
SMG8-202ENST00000543872 BLIDQ8IZY5 108 aa13.82□□□□□ -0.2
SMG8-202ENST00000543872 KIAA0895Q8NCT3 520 aa13.82□□□□□ -0.2
SMG8-202ENST00000543872 PNMA3Q9UL41 463 aa13.82□□□□□ -0.2
SMG8-202ENST00000543872 DPPA5A6NC42 116 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 PGRMC1O00264 195 aaKnown RBP13.81□□□□□ -0.2
SMG8-202ENST00000543872 UQCRFS1P1P0C7P4 283 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 MYBP10242 640 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 ATP4AP20648 1035 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 ATP11AP98196 1134 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 SLMAPQ14BN4 828 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 SLC4A8Q2Y0W8 1093 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 PAPOLBQ9NRJ5 636 aaKnown RBP13.81□□□□□ -0.2
SMG8-202ENST00000543872 TCP11L1Q9NUJ3 509 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 BIN2Q9UBW5 565 aaPredicted RBP13.81□□□□□ -0.2
SMG8-202ENST00000543872 UTP11Q9Y3A2 253 aaKnown RBP13.81□□□□□ -0.2
SMG8-202ENST00000543872 C5P01031 1676 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 SSU72P8A0A1W2PR75 194 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 PDE8BO95263 885 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 SERPING1P05155 500 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 RARAP10276 462 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 PYGBP11216 843 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 CYP7A1P22680 504 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 TROAPQ12815 778 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 LAMB3Q13751 1172 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 PIGWQ7Z7B1 504 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 METTL13Q8N6R0 699 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 DCAF5Q96JK2 942 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 ASAP2O43150 1006 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 PAPOLAP51003 745 aaKnown RBP13.81□□□□□ -0.2
SMG8-202ENST00000543872 ITIH4Q14624 930 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 TXNRD1Q16881 649 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 FAM47AQ5JRC9 791 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 HOOK3Q86VS8 718 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 SCFD2Q8WU76 684 aa13.81□□□□□ -0.2
SMG8-202ENST00000543872 FMO2Q99518 471 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms