RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 REXO1Q8N1G1 1221 aaKnown RBP16.3■□□□□ 0.2
VPS37B-204ENST00000543590 ZNF576Q9H609 170 aa16.3■□□□□ 0.2
VPS37B-204ENST00000543590 SETD4Q9NVD3 440 aa16.3■□□□□ 0.2
VPS37B-204ENST00000543590 TREHO43280 583 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 GNA11P29992 359 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 ZNF76P36508 570 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 RAB30Q15771 203 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 TRAF7Q6Q0C0 670 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 CRYGNQ8WXF5 182 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 AGO4Q9HCK5 861 aaKnown RBP16.29■□□□□ 0.2
VPS37B-204ENST00000543590 JPH1Q9HDC5 661 aaPredicted RBP16.29■□□□□ 0.2
VPS37B-204ENST00000543590 VPS54Q9P1Q0 977 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 SLC9A2Q9UBY0 812 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 MSRAQ9UJ68 235 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 TET1Q8NFU7 2136 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 NFASCO94856 1347 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 CPLX1O14810 134 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 NBNO60934 754 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 CYP3A4P08684 503 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 GNAT1P11488 350 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 ATP2A2P16615 1042 aaKnown RBP16.29■□□□□ 0.2
VPS37B-204ENST00000543590 ANAPC15P60006 121 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 SSRP1Q08945 709 aaKnown RBP16.29■□□□□ 0.2
VPS37B-204ENST00000543590 STK3Q13188 491 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 NIPA1Q7RTP0 329 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 TRIM22Q8IYM9 498 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 CCDC148Q8NFR7 591 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 SDF4Q9BRK5 362 aa16.29■□□□□ 0.2
VPS37B-204ENST00000543590 LAMA2P24043 3122 aaKnown RBP16.28■□□□□ 0.2
VPS37B-204ENST00000543590 FAM86B1E9PN63 330 aa16.28■□□□□ 0.2
VPS37B-204ENST00000543590 CXCL10P02778 98 aa16.28■□□□□ 0.2
VPS37B-204ENST00000543590 FAM86B2P0C5J1 330 aa16.28■□□□□ 0.2
VPS37B-204ENST00000543590 THPOP40225 353 aa16.28■□□□□ 0.2
VPS37B-204ENST00000543590 RABGGTBP53611 331 aa16.28■□□□□ 0.2
VPS37B-204ENST00000543590 ADAM17P78536 824 aa16.28■□□□□ 0.2
VPS37B-204ENST00000543590 ITGB3BPQ13352 177 aaPredicted RBP16.28■□□□□ 0.2
VPS37B-204ENST00000543590 GRIN2CQ14957 1233 aa16.28■□□□□ 0.2
VPS37B-204ENST00000543590 PLA2G4DQ86XP0 818 aa16.28■□□□□ 0.2
VPS37B-204ENST00000543590 BICD2Q8TD16 824 aa16.28■□□□□ 0.2
VPS37B-204ENST00000543590 RASGRP4Q8TDF6 673 aa16.28■□□□□ 0.2
VPS37B-204ENST00000543590 LMBR1Q8WVP7 490 aa16.28■□□□□ 0.2
VPS37B-204ENST00000543590 MYLIPQ8WY64 445 aa16.28■□□□□ 0.2
VPS37B-204ENST00000543590 GLG1Q92896 1179 aa16.28■□□□□ 0.2
VPS37B-204ENST00000543590 NKX2-4Q9H2Z4 354 aa16.28■□□□□ 0.2
VPS37B-204ENST00000543590 SMARCAD1Q9H4L7 1026 aa16.28■□□□□ 0.2
VPS37B-204ENST00000543590 SH3GLB2Q9NR46 395 aa16.28■□□□□ 0.2
VPS37B-204ENST00000543590 ERAP1Q9NZ08 941 aa16.28■□□□□ 0.2
VPS37B-204ENST00000543590 YBX2Q9Y2T7 364 aaKnown RBP16.28■□□□□ 0.2
VPS37B-204ENST00000543590 NRCAMQ92823 1304 aa16.27■□□□□ 0.2
VPS37B-204ENST00000543590 IGLV3-22A0A075B6J6 115 aa16.27■□□□□ 0.19
VPS37B-204ENST00000543590 LGR5O75473 907 aa16.27■□□□□ 0.19
VPS37B-204ENST00000543590 BAIAP3O94812 1187 aa16.27■□□□□ 0.19
VPS37B-204ENST00000543590 MARK3P27448 753 aa16.27■□□□□ 0.19
VPS37B-204ENST00000543590 NLRP5P59047 1200 aa16.27■□□□□ 0.19
VPS37B-204ENST00000543590 ACTR2P61160 394 aa16.27■□□□□ 0.19
VPS37B-204ENST00000543590 MBTPS1Q14703 1052 aa16.27■□□□□ 0.19
VPS37B-204ENST00000543590 CNKSR3Q6P9H4 555 aa16.27■□□□□ 0.19
VPS37B-204ENST00000543590 CPLX2Q6PUV4 134 aaKnown RBP16.27■□□□□ 0.19
VPS37B-204ENST00000543590 PCYT2Q99447 389 aa16.27■□□□□ 0.19
VPS37B-204ENST00000543590 PCDHA11Q9Y5I1 949 aa16.27■□□□□ 0.19
VPS37B-204ENST00000543590 EMSYQ7Z589 1322 aa16.26■□□□□ 0.19
VPS37B-204ENST00000543590 RSPH10B2B2RC85 870 aa16.26■□□□□ 0.19
VPS37B-204ENST00000543590 RBAK-RBAKDNI3L0D1 243 aa16.26■□□□□ 0.19
VPS37B-204ENST00000543590 DEXIO95424 95 aa16.26■□□□□ 0.19
VPS37B-204ENST00000543590 RSPH10BP0C881 870 aa16.26■□□□□ 0.19
VPS37B-204ENST00000543590 TCTN1Q2MV58 587 aa16.26■□□□□ 0.19
VPS37B-204ENST00000543590 PHOSPHO2Q8TCD6 241 aa16.26■□□□□ 0.19
VPS37B-204ENST00000543590 SLC9A7Q96T83 725 aa16.26■□□□□ 0.19
VPS37B-204ENST00000543590 SLC28A3Q9HAS3 691 aa16.26■□□□□ 0.19
VPS37B-204ENST00000543590 GBF1Q92538 1859 aa16.25■□□□□ 0.19
VPS37B-204ENST00000543590 EIF5BO60841 1220 aaKnown RBP16.25■□□□□ 0.19
VPS37B-204ENST00000543590 CAND2O75155 1236 aa16.25■□□□□ 0.19
VPS37B-204ENST00000543590 MYOGP15173 224 aa16.25■□□□□ 0.19
VPS37B-204ENST00000543590 PPFIA1Q13136 1202 aa16.25■□□□□ 0.19
VPS37B-204ENST00000543590 IL17RAQ96F46 866 aa16.25■□□□□ 0.19
VPS37B-204ENST00000543590 SLKQ9H2G2 1235 aaPredicted RBP16.25■□□□□ 0.19
VPS37B-204ENST00000543590 AZI2Q9H6S1 392 aa16.25■□□□□ 0.19
VPS37B-204ENST00000543590 TPCN1Q9ULQ1 816 aa16.25■□□□□ 0.19
VPS37B-204ENST00000543590 ABHD14A-ACY1A0A1B0GW23 586 aa16.24■□□□□ 0.19
VPS37B-204ENST00000543590 DDX39AO00148 427 aaKnown RBP16.24■□□□□ 0.19
VPS37B-204ENST00000543590 IPO5O00410 1097 aaKnown RBP16.24■□□□□ 0.19
VPS37B-204ENST00000543590 DHX15O43143 795 aaKnown RBP16.24■□□□□ 0.19
VPS37B-204ENST00000543590 ATG7O95352 703 aa16.24■□□□□ 0.19
VPS37B-204ENST00000543590 SEC24BO95487 1268 aa16.24■□□□□ 0.19
VPS37B-204ENST00000543590 CCNE2O96020 404 aa16.24■□□□□ 0.19
VPS37B-204ENST00000543590 FOSL2P15408 326 aa16.24■□□□□ 0.19
VPS37B-204ENST00000543590 CIITAP33076 1130 aa16.24■□□□□ 0.19
VPS37B-204ENST00000543590 KCNJ6P48051 423 aa16.24■□□□□ 0.19
VPS37B-204ENST00000543590 WDR5P61964 334 aaKnown RBP16.24■□□□□ 0.19
VPS37B-204ENST00000543590 SCRN1Q12765 414 aa16.24■□□□□ 0.19
VPS37B-204ENST00000543590 GRIK4Q16099 956 aa16.24■□□□□ 0.19
VPS37B-204ENST00000543590 HERC6Q8IVU3 1022 aa16.24■□□□□ 0.19
VPS37B-204ENST00000543590 SLC17A8Q8NDX2 589 aa16.24■□□□□ 0.19
VPS37B-204ENST00000543590 AIFM3Q96NN9 605 aa16.24■□□□□ 0.19
VPS37B-204ENST00000543590 UIMC1Q96RL1 719 aa16.24■□□□□ 0.19
VPS37B-204ENST00000543590 KAT6AQ92794 2004 aa16.24■□□□□ 0.19
VPS37B-204ENST00000543590 PFKFB2O60825 505 aa16.23■□□□□ 0.19
VPS37B-204ENST00000543590 CTSHP09668 335 aa16.23■□□□□ 0.19
VPS37B-204ENST00000543590 STAT5BP51692 787 aa16.23■□□□□ 0.19
VPS37B-204ENST00000543590 AK2P54819 239 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms