RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ZSCAN22P10073 491 aaPredicted RBP7.12□□□□□ -1.27
LTBR-212ENST00000543542 SFNP31947 248 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 TECP42680 631 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 JAK3P52333 1124 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 ACTR2P61160 394 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 CEBPZQ03701 1054 aaKnown RBP7.12□□□□□ -1.27
LTBR-212ENST00000543542 RESTQ13127 1097 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 ZNF746Q6NUN9 644 aaPredicted RBP7.12□□□□□ -1.27
LTBR-212ENST00000543542 TRMT1LQ7Z2T5 733 aaKnown RBP7.12□□□□□ -1.27
LTBR-212ENST00000543542 SMAP1Q8IYB5 467 aaPredicted RBP7.12□□□□□ -1.27
LTBR-212ENST00000543542 C7orf31Q8N865 590 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 ETNPPLQ8TBG4 499 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 DPF3Q92784 378 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 SLC5A5Q92911 643 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 LENG9Q96B70 501 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 MBOAT7Q96N66 472 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 ZNF396Q96N95 335 aaPredicted RBP7.12□□□□□ -1.27
LTBR-212ENST00000543542 HTATIP2Q9BUP3 242 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 RAB34Q9BZG1 259 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 SMARCAD1Q9H4L7 1026 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 TTC12Q9H892 705 aaPredicted RBP7.12□□□□□ -1.27
LTBR-212ENST00000543542 TSHZ2Q9NRE2 1034 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 DISC1Q9NRI5 854 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 PCDHA12Q9UN75 941 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 PHF24Q9UPV7 400 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 NOD1Q9Y239 953 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 ATP11BQ9Y2G3 1177 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 RBM19Q9Y4C8 960 aaKnown RBP7.12□□□□□ -1.27
LTBR-212ENST00000543542 PCDHB6Q9Y5E3 794 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 PCDHA10Q9Y5I2 948 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 GSTTP1A0A1W2PQM5 241 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 H3BRB1 525 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 WNT7AO00755 349 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 CTAGE5O15320 804 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 TLR3O15455 904 aaKnown RBP7.11□□□□□ -1.27
LTBR-212ENST00000543542 DHX15O43143 795 aaKnown RBP7.11□□□□□ -1.27
LTBR-212ENST00000543542 EDIL3O43854 480 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 BMP15O95972 392 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 LGALS2P05162 132 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 SUPT20HL2P0C7V6 817 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 NCLP19338 710 aaKnown RBP7.11□□□□□ -1.27
LTBR-212ENST00000543542 MARK3P27448 753 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 PSEN2P49810 448 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 TOB1P50616 345 aaPredicted RBP7.11□□□□□ -1.27
LTBR-212ENST00000543542 STAT5BP51692 787 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 PSMC6P62333 389 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 NUCB2P80303 420 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 PURAQ00577 322 aaKnown RBP7.11□□□□□ -1.27
LTBR-212ENST00000543542 PTGDRQ13258 359 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 ITGA7Q13683 1181 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 MFSD10Q14728 455 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 SF3A1Q15459 793 aaKnown RBP7.11□□□□□ -1.27
LTBR-212ENST00000543542 KIAA0753Q2KHM9 967 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 SWSAP1Q6NVH7 229 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 PDXDC2PQ6P474 469 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 FAM173BQ6P4H8 233 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 SLC39A5Q6ZMH5 540 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 DTHD1Q6ZMT9 781 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 ERMNQ8TAM6 284 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 TNPO1Q92973 898 aaKnown RBP7.11□□□□□ -1.27
LTBR-212ENST00000543542 CCDC43Q96MW1 224 aaKnown RBP7.11□□□□□ -1.27
LTBR-212ENST00000543542 TMEM60Q9H2L4 133 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 UNC45AQ9H3U1 944 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 TUT1Q9H6E5 874 aaKnown RBP7.11□□□□□ -1.27
LTBR-212ENST00000543542 ZNF302Q9NR11 478 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 ERAP1Q9NZ08 941 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 GABBR1Q9UBS5 961 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 TRPC6Q9Y210 931 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 ATP6V1DQ9Y5K8 247 aa7.11□□□□□ -1.27
LTBR-212ENST00000543542 MROH7Q68CQ1 1323 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 VWA3AA6NCI4 1184 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 DCDC2CA8MYV0 355 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 ARVCFO00192 962 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 LAD1O00515 517 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 PQBP1O60828 265 aaKnown RBP7.1□□□□□ -1.27
LTBR-212ENST00000543542 DKC1O60832 514 aaKnown RBP eCLIP7.1□□□□□ -1.27
LTBR-212ENST00000543542 PSMD10O75832 226 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 CCNE2O96020 404 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 RTP1P59025 263 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 IGBP1P78318 339 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 NKX3-2P78367 333 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 PKP1Q13835 747 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 STK38Q15208 465 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 ZRSR1Q15695 479 aaKnown RBP7.1□□□□□ -1.27
LTBR-212ENST00000543542 NBPF20Q3BBV1 942 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 CCSAPQ6IQ19 270 aaPredicted RBP7.1□□□□□ -1.27
LTBR-212ENST00000543542 ABHD15Q6UXT9 468 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 TRIM50Q86XT4 487 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 BANK1Q8NDB2 785 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 RDM1Q8NG50 284 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 RASSF8Q8NHQ8 419 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 PPP1R13LQ8WUF5 828 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 HAS1Q92839 578 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 ATP6V0A1Q93050 837 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 KCNMB3Q9NPA1 279 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 PRDM5Q9NQX1 630 aaPredicted RBP7.1□□□□□ -1.27
LTBR-212ENST00000543542 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.1□□□□□ -1.27
LTBR-212ENST00000543542 TFIP11Q9UBB9 837 aaKnown RBP7.1□□□□□ -1.27
LTBR-212ENST00000543542 LRWD1Q9UFC0 647 aa7.1□□□□□ -1.27
LTBR-212ENST00000543542 PRKAG2Q9UGJ0 569 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms