RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 SWAP70Q9UH65 585 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 OPLAHO14841 1288 aa13.73□□□□□ -0.21
SMCR5-201ENST00000543475 FKBP3Q00688 224 aaKnown RBP13.73□□□□□ -0.21
SMCR5-201ENST00000543475 MECOMQ03112 1051 aa13.73□□□□□ -0.21
SMCR5-201ENST00000543475 BYSLQ13895 437 aaKnown RBP13.73□□□□□ -0.21
SMCR5-201ENST00000543475 PTPROQ16827 1216 aa13.73□□□□□ -0.21
SMCR5-201ENST00000543475 PROM2Q8N271 834 aa13.73□□□□□ -0.21
SMCR5-201ENST00000543475 GLIS3Q8NEA6 775 aa13.73□□□□□ -0.21
SMCR5-201ENST00000543475 NSUN4Q96CB9 384 aaKnown RBP13.73□□□□□ -0.21
SMCR5-201ENST00000543475 GOLPH3Q9H4A6 298 aa13.73□□□□□ -0.21
SMCR5-201ENST00000543475 DCDC2CA8MYV0 355 aa13.73□□□□□ -0.21
SMCR5-201ENST00000543475 PGRMC1O00264 195 aaKnown RBP13.73□□□□□ -0.21
SMCR5-201ENST00000543475 FLT3P36888 993 aa13.73□□□□□ -0.21
SMCR5-201ENST00000543475 USP11P51784 963 aa13.73□□□□□ -0.21
SMCR5-201ENST00000543475 CLNS1AP54105 237 aaKnown RBP13.73□□□□□ -0.21
SMCR5-201ENST00000543475 ASIC2Q16515 512 aa13.73□□□□□ -0.21
SMCR5-201ENST00000543475 MYOCDQ8IZQ8 938 aa13.73□□□□□ -0.21
SMCR5-201ENST00000543475 ACTRT1Q8TDG2 376 aa13.73□□□□□ -0.21
SMCR5-201ENST00000543475 CCT6BQ92526 530 aa13.73□□□□□ -0.21
SMCR5-201ENST00000543475 ZMYND12Q9H0C1 365 aa13.73□□□□□ -0.21
SMCR5-201ENST00000543475 KDM4CQ9H3R0 1056 aa13.73□□□□□ -0.21
SMCR5-201ENST00000543475 A0A1B0GUA9 196 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 SMCO2A6NFE2 343 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 KRIT1O00522 736 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 DAPK3O43293 454 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 ADAMTS2O95450 1211 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 NBPF9Q3BBW0 867 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 SBK1Q52WX2 424 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 TAX1BP1Q86VP1 789 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 DDX12PQ92771 950 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 CALR3Q96L12 384 aaKnown RBP13.72□□□□□ -0.21
SMCR5-201ENST00000543475 PSMD1Q99460 953 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 C6orf50Q9HD87 102 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 ITGB4P16144 1822 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 DNAJC8O75937 253 aaPredicted RBP13.72□□□□□ -0.21
SMCR5-201ENST00000543475 GOLGA8HP0CJ92 632 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 GNA11P29992 359 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 EPS15P42566 896 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 DHX9Q08211 1270 aaKnown RBP13.72□□□□□ -0.21
SMCR5-201ENST00000543475 PSMD2Q13200 908 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 CRYMQ14894 314 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 IFI16Q16666 785 aaKnown RBP13.72□□□□□ -0.21
SMCR5-201ENST00000543475 KCTD19Q17RG1 926 aaPredicted RBP13.72□□□□□ -0.21
SMCR5-201ENST00000543475 TBCKQ8TEA7 893 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.72□□□□□ -0.21
SMCR5-201ENST00000543475 ATP6V0A4Q9HBG4 840 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 AMACRQ9UHK6 382 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 NOC2LQ9Y3T9 749 aaKnown RBP13.72□□□□□ -0.21
SMCR5-201ENST00000543475 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.72□□□□□ -0.21
SMCR5-201ENST00000543475 USP17L3A6NCW0 530 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 USP17L4A6NCW7 530 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 MGRN1O60291 552 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 USP17L8P0C7I0 530 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 DRD4P21917 467 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 GBP2P32456 591 aaPredicted RBP13.72□□□□□ -0.21
SMCR5-201ENST00000543475 USP17L1Q7RTZ2 530 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 TMC3Q7Z5M5 1100 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 TEX11Q8IYF3 940 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 CHMP6Q96FZ7 201 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 PNMA5Q96PV4 448 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 CNOT10Q9H9A5 744 aaKnown RBP13.72□□□□□ -0.21
SMCR5-201ENST00000543475 KANSL2Q9H9L4 492 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 MKNK2Q9HBH9 465 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 AIPL1Q9NZN9 384 aa13.72□□□□□ -0.21
SMCR5-201ENST00000543475 MYCNP04198 464 aaPredicted RBP13.71□□□□□ -0.21
SMCR5-201ENST00000543475 RPSAP08865 295 aaKnown RBP13.71□□□□□ -0.21
SMCR5-201ENST00000543475 GHRP10912 638 aa13.71□□□□□ -0.21
SMCR5-201ENST00000543475 UBE4AQ14139 1066 aa13.71□□□□□ -0.21
SMCR5-201ENST00000543475 PPP1R7Q15435 360 aa13.71□□□□□ -0.21
SMCR5-201ENST00000543475 TMEM266Q2M3C6 531 aa13.71□□□□□ -0.21
SMCR5-201ENST00000543475 SOGA3Q5TF21 947 aa13.71□□□□□ -0.21
SMCR5-201ENST00000543475 HIBCHQ6NVY1 386 aaPredicted RBP13.71□□□□□ -0.21
SMCR5-201ENST00000543475 RAD54LQ92698 747 aa13.71□□□□□ -0.21
SMCR5-201ENST00000543475 TBC1D31Q96DN5 1066 aa13.71□□□□□ -0.21
SMCR5-201ENST00000543475 CPVLQ9H3G5 476 aa13.71□□□□□ -0.21
SMCR5-201ENST00000543475 BAIAP2L1Q9UHR4 511 aa13.71□□□□□ -0.21
SMCR5-201ENST00000543475 STX8Q9UNK0 236 aa13.71□□□□□ -0.21
SMCR5-201ENST00000543475 A0A0G2JS52 829 aa13.71□□□□□ -0.22
SMCR5-201ENST00000543475 FRMD3A2A2Y4 597 aa13.71□□□□□ -0.22
SMCR5-201ENST00000543475 KLRF2D3W0D1 207 aa13.71□□□□□ -0.22
SMCR5-201ENST00000543475 CCDC188H7C350 402 aa13.71□□□□□ -0.22
SMCR5-201ENST00000543475 CTNND1O60716 968 aaKnown RBP13.71□□□□□ -0.22
SMCR5-201ENST00000543475 ECM2O94769 699 aaPredicted RBP13.71□□□□□ -0.22
SMCR5-201ENST00000543475 TRIM37O94972 964 aa13.71□□□□□ -0.22
SMCR5-201ENST00000543475 CALCRLQ16602 461 aa13.71□□□□□ -0.22
SMCR5-201ENST00000543475 METTL13Q8N6R0 699 aa13.71□□□□□ -0.22
SMCR5-201ENST00000543475 ANKS4BQ8N8V4 417 aa13.71□□□□□ -0.22
SMCR5-201ENST00000543475 CCDC197Q8NCU1 140 aa13.71□□□□□ -0.22
SMCR5-201ENST00000543475 CCDC26Q8TAB7 109 aa13.71□□□□□ -0.22
SMCR5-201ENST00000543475 MDM1Q8TC05 714 aa13.71□□□□□ -0.22
SMCR5-201ENST00000543475 FAM84BQ96KN1 310 aaPredicted RBP13.71□□□□□ -0.22
SMCR5-201ENST00000543475 LRRC27Q9C0I9 530 aa13.71□□□□□ -0.22
SMCR5-201ENST00000543475 BTNL10A8MVZ5 291 aa13.7□□□□□ -0.22
SMCR5-201ENST00000543475 F8VZ95 297 aa13.7□□□□□ -0.22
SMCR5-201ENST00000543475 TSPY3P0CV98 308 aa13.7□□□□□ -0.22
SMCR5-201ENST00000543475 TSPY8P0CW00 308 aa13.7□□□□□ -0.22
SMCR5-201ENST00000543475 ELF3P78545 371 aaPredicted RBP13.7□□□□□ -0.22
SMCR5-201ENST00000543475 C10orf76Q5T2E6 689 aa13.7□□□□□ -0.22
SMCR5-201ENST00000543475 XPO6Q96QU8 1125 aaKnown RBP13.7□□□□□ -0.22
SMCR5-201ENST00000543475 DPH5Q9H2P9 285 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms