RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 SMC3Q9UQE7 1217 aa20.84■□□□□ 0.93
COPS7A-216ENST00000543170 TELO2Q9Y4R8 837 aa20.84■□□□□ 0.93
COPS7A-216ENST00000543170 B4GALT4O60513 344 aa20.83■□□□□ 0.93
COPS7A-216ENST00000543170 LGR5O75473 907 aa20.83■□□□□ 0.93
COPS7A-216ENST00000543170 ATG7O95352 703 aa20.83■□□□□ 0.93
COPS7A-216ENST00000543170 SUPT20HL2P0C7V6 817 aa20.83■□□□□ 0.93
COPS7A-216ENST00000543170 KRT76Q01546 638 aa20.83■□□□□ 0.93
COPS7A-216ENST00000543170 GUCY1B3Q02153 619 aa20.83■□□□□ 0.93
COPS7A-216ENST00000543170 ZNF746Q6NUN9 644 aaPredicted RBP20.83■□□□□ 0.93
COPS7A-216ENST00000543170 ETNPPLQ8TBG4 499 aa20.83■□□□□ 0.93
COPS7A-216ENST00000543170 SLC5A5Q92911 643 aa20.83■□□□□ 0.93
COPS7A-216ENST00000543170 GTF2IRD1Q9UHL9 959 aa20.83■□□□□ 0.93
COPS7A-216ENST00000543170 TCEAL9Q9UHQ7 104 aa20.83■□□□□ 0.93
COPS7A-216ENST00000543170 FAM205CA6NFA0 338 aa20.82■□□□□ 0.92
COPS7A-216ENST00000543170 FAM47CQ5HY64 1035 aa20.82■□□□□ 0.92
COPS7A-216ENST00000543170 SMAP1Q8IYB5 467 aaPredicted RBP20.82■□□□□ 0.92
COPS7A-216ENST00000543170 INTS4Q96HW7 963 aaKnown RBP20.82■□□□□ 0.92
COPS7A-216ENST00000543170 PRDM5Q9NQX1 630 aaPredicted RBP20.82■□□□□ 0.92
COPS7A-216ENST00000543170 TMEM39AQ9NV64 488 aa20.82■□□□□ 0.92
COPS7A-216ENST00000543170 IGKV6D-21A0A0A0MT36 114 aa20.81■□□□□ 0.92
COPS7A-216ENST00000543170 TRIM43BA6NCK2 446 aa20.81■□□□□ 0.92
COPS7A-216ENST00000543170 TBX3O15119 743 aa20.81■□□□□ 0.92
COPS7A-216ENST00000543170 SLC37A4O43826 429 aa20.81■□□□□ 0.92
COPS7A-216ENST00000543170 CCNT1O60563 726 aaKnown RBP20.81■□□□□ 0.92
COPS7A-216ENST00000543170 CCNE2O96020 404 aa20.81■□□□□ 0.92
COPS7A-216ENST00000543170 SYN1P17600 705 aa20.81■□□□□ 0.92
COPS7A-216ENST00000543170 U2AF2P26368 475 aaKnown RBP eCLIP20.81■□□□□ 0.92
COPS7A-216ENST00000543170 HOXC8P31273 242 aa20.81■□□□□ 0.92
COPS7A-216ENST00000543170 SH3RF1Q7Z6J0 888 aa20.81■□□□□ 0.92
COPS7A-216ENST00000543170 TRIM50Q86XT4 487 aa20.81■□□□□ 0.92
COPS7A-216ENST00000543170 C7orf31Q8N865 590 aa20.81■□□□□ 0.92
COPS7A-216ENST00000543170 TRIM43Q96BQ3 446 aaPredicted RBP20.81■□□□□ 0.92
COPS7A-216ENST00000543170 SMARCAD1Q9H4L7 1026 aa20.81■□□□□ 0.92
COPS7A-216ENST00000543170 KCNMB3Q9NPA1 279 aa20.81■□□□□ 0.92
COPS7A-216ENST00000543170 ERAP1Q9NZ08 941 aa20.81■□□□□ 0.92
COPS7A-216ENST00000543170 WDR81Q562E7 1941 aa20.8■□□□□ 0.92
COPS7A-216ENST00000543170 DDX39AO00148 427 aaKnown RBP20.8■□□□□ 0.92
COPS7A-216ENST00000543170 GAS7O60861 476 aa20.8■□□□□ 0.92
COPS7A-216ENST00000543170 PSMD10O75832 226 aa20.8■□□□□ 0.92
COPS7A-216ENST00000543170 SLC26A2P50443 739 aa20.8■□□□□ 0.92
COPS7A-216ENST00000543170 UTP14CQ5TAP6 766 aaKnown RBP20.8■□□□□ 0.92
COPS7A-216ENST00000543170 LRCH2Q5VUJ6 765 aa20.8■□□□□ 0.92
COPS7A-216ENST00000543170 ABHD15Q6UXT9 468 aa20.8■□□□□ 0.92
COPS7A-216ENST00000543170 PLPPR4Q7Z2D5 763 aa20.8■□□□□ 0.92
COPS7A-216ENST00000543170 NOSTRINQ8IVI9 506 aa20.8■□□□□ 0.92
COPS7A-216ENST00000543170 AFAP1L1Q8TED9 768 aa20.8■□□□□ 0.92
COPS7A-216ENST00000543170 FAM20AQ96MK3 541 aa20.8■□□□□ 0.92
COPS7A-216ENST00000543170 PCYT2Q99447 389 aa20.8■□□□□ 0.92
COPS7A-216ENST00000543170 TEKT3Q9BXF9 490 aa20.8■□□□□ 0.92
COPS7A-216ENST00000543170 AZI2Q9H6S1 392 aa20.8■□□□□ 0.92
COPS7A-216ENST00000543170 TRMT13Q9NUP7 481 aaKnown RBP20.8■□□□□ 0.92
COPS7A-216ENST00000543170 HDAC6Q9UBN7 1215 aa20.8■□□□□ 0.92
COPS7A-216ENST00000543170 WDR64B1ANS9 1081 aa20.79■□□□□ 0.92
COPS7A-216ENST00000543170 TRAPPC10P48553 1259 aa20.79■□□□□ 0.92
COPS7A-216ENST00000543170 ORC2Q13416 577 aaPredicted RBP20.79■□□□□ 0.92
COPS7A-216ENST00000543170 GNL2Q13823 731 aaKnown RBP20.79■□□□□ 0.92
COPS7A-216ENST00000543170 GDF6Q6KF10 455 aaPredicted RBP20.79■□□□□ 0.92
COPS7A-216ENST00000543170 MIS18BP1Q6P0N0 1132 aa20.79■□□□□ 0.92
COPS7A-216ENST00000543170 B3GNT9Q6UX72 402 aa20.79■□□□□ 0.92
COPS7A-216ENST00000543170 HSCBQ8IWL3 235 aa20.79■□□□□ 0.92
COPS7A-216ENST00000543170 RDM1Q8NG50 284 aa20.79■□□□□ 0.92
COPS7A-216ENST00000543170 GDF15Q99988 308 aa20.79■□□□□ 0.92
COPS7A-216ENST00000543170 TRPV6Q9H1D0 765 aa20.79■□□□□ 0.92
COPS7A-216ENST00000543170 TANC1Q9C0D5 1861 aa20.79■□□□□ 0.92
COPS7A-216ENST00000543170 MYH9P35579 1960 aaKnown RBP20.79■□□□□ 0.92
COPS7A-216ENST00000543170 KAT6AQ92794 2004 aa20.78■□□□□ 0.92
COPS7A-216ENST00000543170 SMIM10L2AP0DMW4 78 aa20.78■□□□□ 0.92
COPS7A-216ENST00000543170 SMIM10L2BP0DMW5 78 aa20.78■□□□□ 0.92
COPS7A-216ENST00000543170 SFNP31947 248 aa20.78■□□□□ 0.92
COPS7A-216ENST00000543170 JAK3P52333 1124 aa20.78■□□□□ 0.92
COPS7A-216ENST00000543170 CHMP4BP1P59074 171 aa20.78■□□□□ 0.92
COPS7A-216ENST00000543170 FAM160B1Q5W0V3 765 aa20.78■□□□□ 0.92
COPS7A-216ENST00000543170 GLG1Q92896 1179 aa20.78■□□□□ 0.92
COPS7A-216ENST00000543170 PRO3102Q9H379 93 aa20.78■□□□□ 0.92
COPS7A-216ENST00000543170 PCDHA10Q9Y5I2 948 aa20.78■□□□□ 0.92
COPS7A-216ENST00000543170 KIF28PB7ZC32 967 aa20.77■□□□□ 0.92
COPS7A-216ENST00000543170 TIMP1P01033 207 aa20.77■□□□□ 0.92
COPS7A-216ENST00000543170 PSAPP07602 524 aa20.77■□□□□ 0.92
COPS7A-216ENST00000543170 RAG1P15918 1043 aa20.77■□□□□ 0.92
COPS7A-216ENST00000543170 MAGEA10P43363 369 aaPredicted RBP20.77■□□□□ 0.92
COPS7A-216ENST00000543170 STAT5BP51692 787 aa20.77■□□□□ 0.92
COPS7A-216ENST00000543170 PTGISQ16647 500 aa20.77■□□□□ 0.92
COPS7A-216ENST00000543170 POTEDQ86YR6 584 aa20.77■□□□□ 0.92
COPS7A-216ENST00000543170 SLFN12Q8IYM2 578 aa20.77■□□□□ 0.92
COPS7A-216ENST00000543170 TNPO1Q92973 898 aaKnown RBP20.77■□□□□ 0.92
COPS7A-216ENST00000543170 CTAGE1Q96RT6 745 aa20.77■□□□□ 0.92
COPS7A-216ENST00000543170 LBHD1Q9BQE6 289 aaPredicted RBP20.77■□□□□ 0.92
COPS7A-216ENST00000543170 NOC4LQ9BVI4 516 aaKnown RBP20.77■□□□□ 0.92
COPS7A-216ENST00000543170 HIPK3Q9H422 1215 aa20.77■□□□□ 0.92
COPS7A-216ENST00000543170 NOD1Q9Y239 953 aa20.77■□□□□ 0.92
COPS7A-216ENST00000543170 TRIP12Q14669 1992 aaPredicted RBP20.77■□□□□ 0.92
COPS7A-216ENST00000543170 NRCAMQ92823 1304 aa20.77■□□□□ 0.91
COPS7A-216ENST00000543170 IGSF9BQ9UPX0 1349 aa20.77■□□□□ 0.91
COPS7A-216ENST00000543170 C17orf102A2RUQ5 167 aa20.76■□□□□ 0.91
COPS7A-216ENST00000543170 H3BQV1 296 aa20.76■□□□□ 0.91
COPS7A-216ENST00000543170 PITPNM1O00562 1244 aa20.76■□□□□ 0.91
COPS7A-216ENST00000543170 NEMFO60524 1076 aa20.76■□□□□ 0.91
COPS7A-216ENST00000543170 GNAT1P11488 350 aa20.76■□□□□ 0.91
COPS7A-216ENST00000543170 PDCP20941 246 aa20.76■□□□□ 0.91
COPS7A-216ENST00000543170 ITGB8P26012 769 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms