RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 TMC5Q6UXY8 1006 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 NSMFQ6X4W1 530 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 CEP68Q76N32 757 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 TMC7Q7Z402 723 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 CMTR2Q8IYT2 770 aaKnown RBP3.95□□□□□ -1.78
CHD4-209ENST00000542717 LRRC47Q8N1G4 583 aaKnown RBP3.95□□□□□ -1.78
CHD4-209ENST00000542717 PRPF38AQ8NAV1 312 aaKnown RBP3.95□□□□□ -1.78
CHD4-209ENST00000542717 SPATA5Q8NB90 893 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 RASGRP4Q8TDF6 673 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 SPIRE2Q8WWL2 714 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 KAZALD1Q96I82 304 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 NEUROD6Q96NK8 337 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 KLHL5Q96PQ7 755 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 NUP88Q99567 741 aaPredicted RBP3.95□□□□□ -1.78
CHD4-209ENST00000542717 ARID3AQ99856 593 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 TCF25Q9BQ70 676 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 KATNAL1Q9BW62 490 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 ARRDC1-AS1Q9H2J1 176 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 A1CFQ9NQ94 594 aaKnown RBP3.95□□□□□ -1.78
CHD4-209ENST00000542717 RNF146Q9NTX7 359 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 HMG20BQ9P0W2 317 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 KLK13Q9UKR3 277 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 WASF3Q9UPY6 502 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 MSRB2Q9Y3D2 182 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 HCFC2Q9Y5Z7 792 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 TICRRQ7Z2Z1 1910 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 ABCA12Q86UK0 2595 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 MYH1P12882 1939 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 HIDE1A8MVS5 230 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 AXIN1O15169 862 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 DGKIO75912 1065 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 STAG3L1P0CL83 205 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 ALAS1P13196 640 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 EEF2P13639 858 aaKnown RBP3.94□□□□□ -1.78
CHD4-209ENST00000542717 RIPPLY3P57055 190 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 PDE4DQ08499 809 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 SNW1Q13573 536 aaKnown RBP3.94□□□□□ -1.78
CHD4-209ENST00000542717 KCNC3Q14003 757 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 BMS1Q14692 1282 aaKnown RBP3.94□□□□□ -1.78
CHD4-209ENST00000542717 MFSD10Q14728 455 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 KIAA0753Q2KHM9 967 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 ZBTB41Q5SVQ8 909 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.94□□□□□ -1.78
CHD4-209ENST00000542717 ZNF843Q8N446 348 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 SLC44A3Q8N4M1 653 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 ANKRD44Q8N8A2 993 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 MIGA1Q8NAN2 632 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 SCFD2Q8WU76 684 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 ATP6V0A1Q93050 837 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 ZNF689Q96CS4 500 aaPredicted RBP3.94□□□□□ -1.78
CHD4-209ENST00000542717 XAGE2Q96GT9 111 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 TRERF1Q96PN7 1200 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 MPHOSPH6Q99547 160 aaKnown RBP3.94□□□□□ -1.78
CHD4-209ENST00000542717 CCDC86Q9H6F5 360 aaKnown RBP3.94□□□□□ -1.78
CHD4-209ENST00000542717 NGRNQ9NPE2 291 aaKnown RBP3.94□□□□□ -1.78
CHD4-209ENST00000542717 ADD3Q9UEY8 706 aaKnown RBP3.94□□□□□ -1.78
CHD4-209ENST00000542717 LRFN2Q9ULH4 789 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 SHROOM3Q8TF72 1996 aa3.94□□□□□ -1.78
CHD4-209ENST00000542717 MIA3Q5JRA6 1907 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 DMXL2Q8TDJ6 3036 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 SDK1Q7Z5N4 2213 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 C17orf102A2RUQ5 167 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 CAPN8A6NHC0 703 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 C4orf47A7E2U8 309 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 F5H6K3 240 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 ENPP3O14638 875 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 FSCN2O14926 492 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 ATP2A1O14983 1001 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 ZNF806P0C7X5 589 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 GHRP10912 638 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 CEACAM1P13688 526 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 AKR1B1P15121 316 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 CD72P21854 359 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 CYP7A1P22680 504 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 CCR10P46092 362 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 ALDH5A1P51649 535 aaPredicted RBP3.93□□□□□ -1.78
CHD4-209ENST00000542717 OAZ1P54368 228 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 STARD6P59095 220 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 FGD1P98174 961 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 ADCY1Q08828 1119 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 SCAPQ12770 1279 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 IKQ13123 557 aaPredicted RBP3.93□□□□□ -1.78
CHD4-209ENST00000542717 SRSF5Q13243 272 aaKnown RBP3.93□□□□□ -1.78
CHD4-209ENST00000542717 DGKDQ16760 1214 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 ADGRA1Q86SQ6 560 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 CABP7Q86V35 215 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 SIAH1Q8IUQ4 282 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 FAM160A2Q8N612 972 aaPredicted RBP3.93□□□□□ -1.78
CHD4-209ENST00000542717 MRPS27Q92552 414 aaKnown RBP3.93□□□□□ -1.78
CHD4-209ENST00000542717 STAMQ92783 540 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 KAT2BQ92831 832 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 NELL1Q92832 810 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 TSR2Q969E8 191 aaKnown RBP3.93□□□□□ -1.78
CHD4-209ENST00000542717 EDEM2Q9BV94 578 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 PCGF6Q9BYE7 350 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 OSBPL7Q9BZF2 842 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 RC3H2Q9HBD1 1191 aaKnown RBP3.93□□□□□ -1.78
CHD4-209ENST00000542717 SLC38A10Q9HBR0 1119 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 GPCPD1Q9NPB8 672 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 SNRKQ9NRH2 765 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms