RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 NR3C2P08235 984 aa13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 EIF2AK2P19525 551 aaKnown RBP13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 ALDH5A1P51649 535 aaPredicted RBP13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 NHLH1Q02575 133 aa13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 PDIA5Q14554 519 aa13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 GNPTABQ3T906 1256 aa13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 PRR16Q569H4 304 aa13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 RESP18Q5W5W9 173 aa13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 CCDC73Q6ZRK6 1079 aa13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 GPR142Q7Z601 462 aa13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 PLEKHH3Q7Z736 793 aa13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 NLRX1Q86UT6 975 aa13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 MSL3Q8N5Y2 521 aaKnown RBP13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 ETNPPLQ8TBG4 499 aa13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 MORC4Q8TE76 937 aa13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 SOCS4Q8WXH5 440 aa13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 BADQ92934 168 aa13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 INPP4AQ96PE3 977 aaPredicted RBP13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 GAS2L1Q99501 681 aaPredicted RBP13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 TMEM60Q9H2L4 133 aa13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 JADE2Q9NQC1 790 aa13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 FAM13BQ9NYF5 915 aa13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 DDX49Q9Y6V7 483 aaKnown RBP13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 KIAA1217Q5T5P2 1943 aa13.86□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 ASB14A6NK59 587 aa13.86□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 TRAK2O60296 914 aa13.86□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 PEX10O60683 326 aa13.86□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 GADD45BO75293 160 aaPredicted RBP13.86□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 TXLNAP40222 546 aa13.86□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 FAM160A1Q05DH4 1040 aa13.86□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 STXBP2Q15833 593 aa13.86□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 WDR78Q5VTH9 848 aa13.86□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 PLA2G4DQ86XP0 818 aa13.86□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 IGSF22Q8N9C0 903 aa13.86□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 HAS1Q92839 578 aa13.86□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 SYAP1Q96A49 352 aaPredicted RBP13.86□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 RIT2Q99578 217 aa13.86□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 HPSEQ9Y251 543 aa13.86□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 VWA3AA6NCI4 1184 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 SOWAHBA6NEL2 793 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 MARCH6O60337 910 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 EIF3JO75822 258 aaKnown RBP13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 ADORA2AP29274 412 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 ICAM3P32942 547 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 RTP1P59025 263 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 MRPS9P82933 396 aaKnown RBP13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 MTMR1Q13613 665 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 ADGRE1Q14246 886 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 CCDC85BQ15834 202 aaPredicted RBP13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 ZNF792Q3KQV3 632 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 SHC4Q6S5L8 630 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 KCTD17Q8N5Z5 321 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 FSIP1Q8NA03 581 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 IL31RAQ8NI17 732 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 GPT2Q8TD30 523 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 SLC5A5Q92911 643 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 KHSRPQ92945 711 aaKnown RBP eCLIP13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 RNPC3Q96LT9 517 aaKnown RBP13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 ANP32EQ9BTT0 268 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 WDR11Q9BZH6 1224 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 CCSER1Q9C0I3 900 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 SENP6Q9GZR1 1112 aaPredicted RBP13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 CSRNP2Q9H175 543 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 DDX19AQ9NUU7 478 aaKnown RBP13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 USP25Q9UHP3 1055 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 PCDHA12Q9UN75 941 aa13.85□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 MSH4O15457 936 aa13.84□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 HOXC6P09630 235 aa13.84□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 ITGB5P18084 799 aa13.84□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 ATN1P54259 1190 aaPredicted RBP13.84□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 CNTN2Q02246 1040 aa13.84□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 PDE4DQ08499 809 aa13.84□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 KCNV1Q6PIU1 500 aa13.84□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 MAMDC4Q6UXC1 1216 aa13.84□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 CCDC34Q96HJ3 373 aa13.84□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 FGD4Q96M96 766 aa13.84□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 TIGD1Q96MW7 591 aa13.84□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 CLIC6Q96NY7 704 aa13.84□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 TTC12Q9H892 705 aaPredicted RBP13.84□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 KCNH7Q9NS40 1196 aa13.84□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 TBC1D22BQ9NU19 505 aa13.84□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 MRVI1Q9Y6F6 885 aa13.84□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 ASTN1O14525 1302 aa13.84□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 IPO5O00410 1097 aaKnown RBP13.83□□□□□ -0.2
CACNA1C-IT3-201ENST00000542680 TGFB3P10600 412 aa13.83□□□□□ -0.2
CACNA1C-IT3-201ENST00000542680 MYCLP12524 364 aaPredicted RBP13.83□□□□□ -0.2
CACNA1C-IT3-201ENST00000542680 PFKFB1P16118 471 aa13.83□□□□□ -0.2
CACNA1C-IT3-201ENST00000542680 TXKP42681 527 aa13.83□□□□□ -0.2
CACNA1C-IT3-201ENST00000542680 KCNQ1P51787 676 aa13.83□□□□□ -0.2
CACNA1C-IT3-201ENST00000542680 TFF2Q03403 129 aa13.83□□□□□ -0.2
CACNA1C-IT3-201ENST00000542680 MAP2K5Q13163 448 aa13.83□□□□□ -0.2
CACNA1C-IT3-201ENST00000542680 PPP2R5CQ13362 524 aa13.83□□□□□ -0.2
CACNA1C-IT3-201ENST00000542680 IL17AQ16552 155 aa13.83□□□□□ -0.2
CACNA1C-IT3-201ENST00000542680 MORN1Q5T089 497 aa13.83□□□□□ -0.2
CACNA1C-IT3-201ENST00000542680 HAUS3Q68CZ6 603 aa13.83□□□□□ -0.2
CACNA1C-IT3-201ENST00000542680 ELOA2Q8IYF1 753 aaPredicted RBP13.83□□□□□ -0.2
CACNA1C-IT3-201ENST00000542680 ENGASEQ8NFI3 743 aa13.83□□□□□ -0.2
CACNA1C-IT3-201ENST00000542680 ERMNQ8TAM6 284 aa13.83□□□□□ -0.2
CACNA1C-IT3-201ENST00000542680 TIFAQ96CG3 184 aa13.83□□□□□ -0.2
CACNA1C-IT3-201ENST00000542680 SENP7Q9BQF6 1050 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms