RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 SLC9A2Q9UBY0 812 aa17.59■□□□□ 0.41
ECHDC2-223ENST00000542552 NOD1Q9Y239 953 aa17.59■□□□□ 0.41
ECHDC2-223ENST00000542552 SCN5AQ14524 2016 aa17.59■□□□□ 0.41
ECHDC2-223ENST00000542552 DHX15O43143 795 aaKnown RBP17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 DTNBO60941 627 aa17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 LGR5O75473 907 aa17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 ATG7O95352 703 aa17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 SMIM10L2AP0DMW4 78 aa17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 SMIM10L2BP0DMW5 78 aa17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 ACRP10323 421 aa17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 USP11P51784 963 aa17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 ZNF200P98182 395 aaPredicted RBP17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 ST3GAL1Q11201 340 aa17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 PTK7Q13308 1070 aa17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 TRIM71Q2Q1W2 868 aaKnown RBP17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 UTP14CQ5TAP6 766 aaKnown RBP17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 PSRC1Q6PGN9 363 aaPredicted RBP17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 ZNF365Q70YC5 407 aa17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 SERINC5Q86VE9 423 aa17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 LENG9Q96B70 501 aa17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 SDF4Q9BRK5 362 aa17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 RNPEPQ9H4A4 650 aa17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 ZNF215Q9UL58 517 aaPredicted RBP17.58■□□□□ 0.4
ECHDC2-223ENST00000542552 EMSYQ7Z589 1322 aa17.57■□□□□ 0.4
ECHDC2-223ENST00000542552 CHD9Q3L8U1 2897 aa17.57■□□□□ 0.4
ECHDC2-223ENST00000542552 IQCF3P0C7M6 154 aa17.57■□□□□ 0.4
ECHDC2-223ENST00000542552 RFC2P35250 354 aa17.57■□□□□ 0.4
ECHDC2-223ENST00000542552 ACTR2P61160 394 aa17.57■□□□□ 0.4
ECHDC2-223ENST00000542552 ADAM17P78536 824 aa17.57■□□□□ 0.4
ECHDC2-223ENST00000542552 SETQ01105 290 aaPredicted RBP17.57■□□□□ 0.4
ECHDC2-223ENST00000542552 RPUSD2Q8IZ73 545 aaKnown RBP17.57■□□□□ 0.4
ECHDC2-223ENST00000542552 CCDC155Q8N6L0 562 aa17.57■□□□□ 0.4
ECHDC2-223ENST00000542552 RETREG2Q8NC44 543 aa17.57■□□□□ 0.4
ECHDC2-223ENST00000542552 NSUN7Q8NE18 718 aaKnown RBP17.57■□□□□ 0.4
ECHDC2-223ENST00000542552 AFAP1L1Q8TED9 768 aa17.57■□□□□ 0.4
ECHDC2-223ENST00000542552 WNT8BQ93098 351 aa17.57■□□□□ 0.4
ECHDC2-223ENST00000542552 RNPC3Q96LT9 517 aaKnown RBP17.57■□□□□ 0.4
ECHDC2-223ENST00000542552 PCYT2Q99447 389 aa17.57■□□□□ 0.4
ECHDC2-223ENST00000542552 ORC3Q9UBD5 711 aaPredicted RBP17.57■□□□□ 0.4
ECHDC2-223ENST00000542552 KCNJ14Q9UNX9 436 aa17.57■□□□□ 0.4
ECHDC2-223ENST00000542552 LIMCH1Q9UPQ0 1083 aa17.57■□□□□ 0.4
ECHDC2-223ENST00000542552 IGKV6D-21A0A0A0MT36 114 aa17.56■□□□□ 0.4
ECHDC2-223ENST00000542552 C17orf102A2RUQ5 167 aa17.56■□□□□ 0.4
ECHDC2-223ENST00000542552 IPO5O00410 1097 aaKnown RBP17.56■□□□□ 0.4
ECHDC2-223ENST00000542552 CCNE2O96020 404 aa17.56■□□□□ 0.4
ECHDC2-223ENST00000542552 PFKMP08237 780 aa17.56■□□□□ 0.4
ECHDC2-223ENST00000542552 GPNMBQ14956 572 aa17.56■□□□□ 0.4
ECHDC2-223ENST00000542552 TRAF7Q6Q0C0 670 aa17.56■□□□□ 0.4
ECHDC2-223ENST00000542552 TBCKQ8TEA7 893 aa17.56■□□□□ 0.4
ECHDC2-223ENST00000542552 HERVK_113Q902F9 699 aa17.56■□□□□ 0.4
ECHDC2-223ENST00000542552 WASF1Q92558 559 aa17.56■□□□□ 0.4
ECHDC2-223ENST00000542552 SMARCAD1Q9H4L7 1026 aa17.56■□□□□ 0.4
ECHDC2-223ENST00000542552 GJB4Q9NTQ9 266 aa17.56■□□□□ 0.4
ECHDC2-223ENST00000542552 ERAP1Q9NZ08 941 aa17.56■□□□□ 0.4
ECHDC2-223ENST00000542552 CDH23Q9H251 3354 aa17.56■□□□□ 0.4
ECHDC2-223ENST00000542552 KAT6AQ92794 2004 aa17.55■□□□□ 0.4
ECHDC2-223ENST00000542552 CYP3A7-CYP3A51PA0A087WV96 503 aa17.55■□□□□ 0.4
ECHDC2-223ENST00000542552 TREHO43280 583 aa17.55■□□□□ 0.4
ECHDC2-223ENST00000542552 FGBP02675 491 aa17.55■□□□□ 0.4
ECHDC2-223ENST00000542552 CKBP12277 381 aa17.55■□□□□ 0.4
ECHDC2-223ENST00000542552 SELPP16109 830 aa17.55■□□□□ 0.4
ECHDC2-223ENST00000542552 XBP1P17861 261 aa17.55■□□□□ 0.4
ECHDC2-223ENST00000542552 CYP3A7P24462 503 aa17.55■□□□□ 0.4
ECHDC2-223ENST00000542552 SMAD3P84022 425 aaKnown RBP17.55■□□□□ 0.4
ECHDC2-223ENST00000542552 PRR16Q569H4 304 aa17.55■□□□□ 0.4
ECHDC2-223ENST00000542552 ABHD15Q6UXT9 468 aa17.55■□□□□ 0.4
ECHDC2-223ENST00000542552 TET1Q8NFU7 2136 aa17.55■□□□□ 0.4
ECHDC2-223ENST00000542552 ATP6V0A1Q93050 837 aa17.55■□□□□ 0.4
ECHDC2-223ENST00000542552 ZNF577Q9BSK1 485 aa17.55■□□□□ 0.4
ECHDC2-223ENST00000542552 TBC1D22BQ9NU19 505 aa17.55■□□□□ 0.4
ECHDC2-223ENST00000542552 SETD4Q9NVD3 440 aa17.55■□□□□ 0.4
ECHDC2-223ENST00000542552 NRCAMQ92823 1304 aa17.54■□□□□ 0.4
ECHDC2-223ENST00000542552 JAK2O60674 1132 aa17.54■□□□□ 0.4
ECHDC2-223ENST00000542552 GNAT1P11488 350 aa17.54■□□□□ 0.4
ECHDC2-223ENST00000542552 FAM109BQ6ICB4 259 aaPredicted RBP17.54■□□□□ 0.4
ECHDC2-223ENST00000542552 LRRC8DQ7L1W4 858 aa17.54■□□□□ 0.4
ECHDC2-223ENST00000542552 PLPPR4Q7Z2D5 763 aa17.54■□□□□ 0.4
ECHDC2-223ENST00000542552 KRT25Q7Z3Z0 450 aa17.54■□□□□ 0.4
ECHDC2-223ENST00000542552 LMBR1Q8WVP7 490 aa17.54■□□□□ 0.4
ECHDC2-223ENST00000542552 GLG1Q92896 1179 aa17.54■□□□□ 0.4
ECHDC2-223ENST00000542552 MBOAT7Q96N66 472 aa17.54■□□□□ 0.4
ECHDC2-223ENST00000542552 CXXC1Q9P0U4 656 aaPredicted RBP17.54■□□□□ 0.4
ECHDC2-223ENST00000542552 MSH4O15457 936 aa17.53■□□□□ 0.4
ECHDC2-223ENST00000542552 PARNO95453 639 aaKnown RBP17.53■□□□□ 0.4
ECHDC2-223ENST00000542552 NONOQ15233 471 aaKnown RBP eCLIP17.53■□□□□ 0.4
ECHDC2-223ENST00000542552 Q4G0T1 1027 aa17.53■□□□□ 0.4
ECHDC2-223ENST00000542552 ZNF746Q6NUN9 644 aaPredicted RBP17.53■□□□□ 0.4
ECHDC2-223ENST00000542552 MOXD1Q6UVY6 613 aa17.53■□□□□ 0.4
ECHDC2-223ENST00000542552 OXER1Q8TDS5 423 aa17.53■□□□□ 0.4
ECHDC2-223ENST00000542552 ZSCAN31Q96LW9 406 aaPredicted RBP17.53■□□□□ 0.4
ECHDC2-223ENST00000542552 COL6A3P12111 3177 aa17.53■□□□□ 0.4
ECHDC2-223ENST00000542552 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 DDX39AO00148 427 aaKnown RBP17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 CXCL10P02778 98 aa17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 MARK3P27448 753 aa17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 SLC26A2P50443 739 aa17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 STAT5BP51692 787 aa17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 MBTPS1Q14703 1052 aa17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 RABEP1Q15276 862 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms