RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 SORCS2Q96PQ0 1159 aa5.55□□□□□ -1.52
LEMD3-204ENST00000542032 KCNJ15Q99712 375 aa5.55□□□□□ -1.52
LEMD3-204ENST00000542032 CDC6Q99741 560 aa5.55□□□□□ -1.52
LEMD3-204ENST00000542032 ALG1Q9BT22 464 aa5.55□□□□□ -1.52
LEMD3-204ENST00000542032 MRPS23Q9Y3D9 190 aaKnown RBP5.55□□□□□ -1.52
LEMD3-204ENST00000542032 MLLT6P55198 1093 aaPredicted RBP5.54□□□□□ -1.52
LEMD3-204ENST00000542032 PAK1Q13153 545 aa5.54□□□□□ -1.52
LEMD3-204ENST00000542032 RGL3Q3MIN7 710 aa5.54□□□□□ -1.52
LEMD3-204ENST00000542032 TRIM61Q5EBN2 209 aa5.54□□□□□ -1.52
LEMD3-204ENST00000542032 KCTD1Q719H9 257 aa5.54□□□□□ -1.52
LEMD3-204ENST00000542032 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.54□□□□□ -1.52
LEMD3-204ENST00000542032 RBM12BQ8IXT5 1001 aaKnown RBP5.54□□□□□ -1.52
LEMD3-204ENST00000542032 ZCCHC14Q8WYQ9 949 aaKnown RBP5.54□□□□□ -1.52
LEMD3-204ENST00000542032 MBD6Q96DN6 1003 aa5.54□□□□□ -1.52
LEMD3-204ENST00000542032 YTHDC1Q96MU7 727 aaKnown RBP5.54□□□□□ -1.52
LEMD3-204ENST00000542032 CLIC6Q96NY7 704 aa5.54□□□□□ -1.52
LEMD3-204ENST00000542032 WRNIP1Q96S55 665 aa5.54□□□□□ -1.52
LEMD3-204ENST00000542032 USP40Q9NVE5 1235 aa5.54□□□□□ -1.52
LEMD3-204ENST00000542032 RBPJLQ9UBG7 517 aa5.54□□□□□ -1.52
LEMD3-204ENST00000542032 CNOT11Q9UKZ1 510 aaKnown RBP5.54□□□□□ -1.52
LEMD3-204ENST00000542032 DSEQ9UL01 958 aa5.54□□□□□ -1.52
LEMD3-204ENST00000542032 NUB1Q9Y5A7 615 aa5.54□□□□□ -1.52
LEMD3-204ENST00000542032 MROH6A6NGR9 719 aa5.53□□□□□ -1.52
LEMD3-204ENST00000542032 ACOT7O00154 380 aa5.53□□□□□ -1.52
LEMD3-204ENST00000542032 DDX3XO00571 662 aaKnown RBP eCLIP5.53□□□□□ -1.52
LEMD3-204ENST00000542032 KCNQ2O43526 872 aa5.53□□□□□ -1.52
LEMD3-204ENST00000542032 TNFRSF1AP19438 455 aa5.53□□□□□ -1.52
LEMD3-204ENST00000542032 IL13P35225 146 aa5.53□□□□□ -1.52
LEMD3-204ENST00000542032 PLP2Q04941 152 aa5.53□□□□□ -1.52
LEMD3-204ENST00000542032 GSTCDQ8NEC7 633 aa5.53□□□□□ -1.52
LEMD3-204ENST00000542032 ZSWIM3Q96MP5 696 aa5.53□□□□□ -1.52
LEMD3-204ENST00000542032 RBM15Q96T37 977 aaKnown RBP eCLIP5.53□□□□□ -1.52
LEMD3-204ENST00000542032 DNAJC7Q99615 494 aa5.53□□□□□ -1.52
LEMD3-204ENST00000542032 DLL4Q9NR61 685 aa5.53□□□□□ -1.52
LEMD3-204ENST00000542032 PCDHA8Q9Y5H6 950 aa5.53□□□□□ -1.52
LEMD3-204ENST00000542032 CYP7B1O75881 506 aa5.52□□□□□ -1.53
LEMD3-204ENST00000542032 AMY2AP04746 511 aa5.52□□□□□ -1.53
LEMD3-204ENST00000542032 NAT1P18440 290 aa5.52□□□□□ -1.53
LEMD3-204ENST00000542032 AMY2BP19961 511 aa5.52□□□□□ -1.53
LEMD3-204ENST00000542032 GRIN1Q05586 938 aa5.52□□□□□ -1.53
LEMD3-204ENST00000542032 KIAA2012Q0VF49 1180 aa5.52□□□□□ -1.53
LEMD3-204ENST00000542032 GPR19Q15760 415 aa5.52□□□□□ -1.53
LEMD3-204ENST00000542032 MCTP2Q6DN12 878 aa5.52□□□□□ -1.53
LEMD3-204ENST00000542032 TMC5Q6UXY8 1006 aa5.52□□□□□ -1.53
LEMD3-204ENST00000542032 C16orf59Q7L2K0 433 aa5.52□□□□□ -1.53
LEMD3-204ENST00000542032 FERMT3Q86UX7 667 aa5.52□□□□□ -1.53
LEMD3-204ENST00000542032 THAP3Q8WTV1 239 aaPredicted RBP5.52□□□□□ -1.53
LEMD3-204ENST00000542032 SREK1Q8WXA9 508 aaKnown RBP5.52□□□□□ -1.53
LEMD3-204ENST00000542032 FBXW5Q969U6 566 aa5.52□□□□□ -1.53
LEMD3-204ENST00000542032 IPO9Q96P70 1041 aaKnown RBP5.52□□□□□ -1.53
LEMD3-204ENST00000542032 SRPK1Q96SB4 655 aaKnown RBP5.52□□□□□ -1.53
LEMD3-204ENST00000542032 SRPK3Q9UPE1 567 aa5.52□□□□□ -1.53
LEMD3-204ENST00000542032 CCDC163A0A0D9SF12 145 aa5.51□□□□□ -1.53
LEMD3-204ENST00000542032 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.51□□□□□ -1.53
LEMD3-204ENST00000542032 CRTAMO95727 393 aa5.51□□□□□ -1.53
LEMD3-204ENST00000542032 CHGBP05060 677 aa5.51□□□□□ -1.53
LEMD3-204ENST00000542032 CNR2P34972 360 aa5.51□□□□□ -1.53
LEMD3-204ENST00000542032 GUCY1A3Q02108 690 aa5.51□□□□□ -1.53
LEMD3-204ENST00000542032 UBXN11Q5T124 520 aa5.51□□□□□ -1.53
LEMD3-204ENST00000542032 CD276Q5ZPR3 534 aa5.51□□□□□ -1.53
LEMD3-204ENST00000542032 VASNQ6EMK4 673 aa5.51□□□□□ -1.53
LEMD3-204ENST00000542032 PKN3Q6P5Z2 889 aa5.51□□□□□ -1.53
LEMD3-204ENST00000542032 HHIPL2Q6UWX4 724 aa5.51□□□□□ -1.53
LEMD3-204ENST00000542032 MTDHQ86UE4 582 aaKnown RBP5.51□□□□□ -1.53
LEMD3-204ENST00000542032 DDX1Q92499 740 aaKnown RBP5.51□□□□□ -1.53
LEMD3-204ENST00000542032 BDH2Q9BUT1 245 aa5.51□□□□□ -1.53
LEMD3-204ENST00000542032 SLC52A2Q9HAB3 445 aa5.51□□□□□ -1.53
LEMD3-204ENST00000542032 KCND1Q9NSA2 647 aa5.51□□□□□ -1.53
LEMD3-204ENST00000542032 CBLCQ9ULV8 474 aa5.51□□□□□ -1.53
LEMD3-204ENST00000542032 ZNF839A8K0R7 811 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 ZNF561-AS1K7EIQ3 104 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 MAN2B1O00754 1011 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 B4GALT3O60512 393 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 EFCAB14O75071 495 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 KLHL18O94889 574 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 CKMP06732 381 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 PYGMP11217 842 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 LACTBP83111 547 aaPredicted RBP5.5□□□□□ -1.53
LEMD3-204ENST00000542032 C2orf27AQ580R0 203 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 PRAMEF18Q5VWM3 479 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 ARHGAP36Q6ZRI8 547 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 NLGN4XQ8N0W4 816 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 LGI4Q8N135 537 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 LILRB2Q8N423 598 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 ZSWIM2Q8NEG5 633 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 SLC7A14Q8TBB6 771 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 PMFBP1Q8TBY8 1022 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 LCORQ96JN0 433 aaPredicted RBP5.5□□□□□ -1.53
LEMD3-204ENST00000542032 SSBP3Q9BWW4 388 aaPredicted RBP5.5□□□□□ -1.53
LEMD3-204ENST00000542032 CD244Q9BZW8 370 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 OSBPL2Q9H1P3 480 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 CROTQ9UKG9 612 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 PCDHA9Q9Y5H5 950 aa5.5□□□□□ -1.53
LEMD3-204ENST00000542032 FAM90A27PA6NNH2 459 aa5.49□□□□□ -1.53
LEMD3-204ENST00000542032 PLATP00750 562 aa5.49□□□□□ -1.53
LEMD3-204ENST00000542032 KNG1P01042 644 aa5.49□□□□□ -1.53
LEMD3-204ENST00000542032 ITGB3P05106 788 aa5.49□□□□□ -1.53
LEMD3-204ENST00000542032 ENO2P09104 434 aaPredicted RBP5.49□□□□□ -1.53
LEMD3-204ENST00000542032 PDE6AP16499 860 aa5.49□□□□□ -1.53
LEMD3-204ENST00000542032 PTPN1P18031 435 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms