RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 PRR13Q9NZ81 148 aa6.78□□□□□ -1.32
CPSF7-220ENST00000541963 TRMT112Q9UI30 125 aaKnown RBP6.78□□□□□ -1.32
CPSF7-220ENST00000541963 AKT3Q9Y243 479 aa6.78□□□□□ -1.32
CPSF7-220ENST00000541963 DIS3Q9Y2L1 958 aaKnown RBP6.78□□□□□ -1.32
CPSF7-220ENST00000541963 SF3B6Q9Y3B4 125 aaKnown RBP6.78□□□□□ -1.32
CPSF7-220ENST00000541963 KIAA1551Q9HCM1 1747 aa6.77□□□□□ -1.33
CPSF7-220ENST00000541963 ENPP3O14638 875 aa6.77□□□□□ -1.33
CPSF7-220ENST00000541963 ADMP35318 185 aa6.77□□□□□ -1.33
CPSF7-220ENST00000541963 NEXNQ0ZGT2 675 aa6.77□□□□□ -1.33
CPSF7-220ENST00000541963 NFIAQ12857 509 aa6.77□□□□□ -1.33
CPSF7-220ENST00000541963 NLRP10Q86W26 655 aa6.77□□□□□ -1.33
CPSF7-220ENST00000541963 RTKN2Q8IZC4 609 aa6.77□□□□□ -1.33
CPSF7-220ENST00000541963 BVESQ8NE79 360 aa6.77□□□□□ -1.33
CPSF7-220ENST00000541963 PIWIL2Q8TC59 973 aaKnown RBP6.77□□□□□ -1.33
CPSF7-220ENST00000541963 PRDM14Q9GZV8 571 aa6.77□□□□□ -1.33
CPSF7-220ENST00000541963 FANCLQ9NW38 375 aa6.77□□□□□ -1.33
CPSF7-220ENST00000541963 RNF181Q9P0P0 153 aa6.77□□□□□ -1.33
CPSF7-220ENST00000541963 ARFGEF1Q9Y6D6 1849 aa6.77□□□□□ -1.33
CPSF7-220ENST00000541963 BRCA1P38398 1863 aaKnown RBP6.77□□□□□ -1.33
CPSF7-220ENST00000541963 UBN2Q6ZU65 1347 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 SH3TC1Q8TE82 1336 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 TRAV20A0A0B4J274 112 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 CCDC163A0A0D9SF12 145 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 FAM170BA6NMN3 283 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 WDR64B1ANS9 1081 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 CBFA2T2O43439 604 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 LRRN2O75325 713 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 BBOX1O75936 387 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 NTSR2O95665 410 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 HOXA10P31260 410 aaPredicted RBP6.76□□□□□ -1.33
CPSF7-220ENST00000541963 CRY2Q49AN0 593 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 CCDC93Q567U6 631 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 CWF19L1Q69YN2 538 aaKnown RBP6.76□□□□□ -1.33
CPSF7-220ENST00000541963 KSR2Q6VAB6 950 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 C22orf34Q6ZV56 151 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 DDX46Q7L014 1031 aaKnown RBP6.76□□□□□ -1.33
CPSF7-220ENST00000541963 ZNF765Q7L2R6 523 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 SLC51AQ86UW1 340 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 MFSD4AQ8N468 514 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 TSPYL6Q8N831 410 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 ZBTB38Q8NAP3 1195 aaPredicted RBP6.76□□□□□ -1.33
CPSF7-220ENST00000541963 ADCY4Q8NFM4 1077 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 ENOX1Q8TC92 643 aaKnown RBP6.76□□□□□ -1.33
CPSF7-220ENST00000541963 RCC1LQ96I51 464 aaKnown RBP6.76□□□□□ -1.33
CPSF7-220ENST00000541963 CRAMP1Q96RY5 1269 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 ISCA1Q9BUE6 129 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 TAOK3Q9H2K8 898 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 TRIT1Q9H3H1 467 aaKnown RBP6.76□□□□□ -1.33
CPSF7-220ENST00000541963 TPSG1Q9NRR2 321 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 SUSD2Q9UGT4 822 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 FHOD1Q9Y613 1164 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 FANCIQ9NVI1 1328 aa6.76□□□□□ -1.33
CPSF7-220ENST00000541963 DLEC1Q9Y238 1755 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 ESYT3A0FGR9 886 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 ANKRD62A6NC57 917 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 PPP1R12AO14974 1030 aaPredicted RBP6.75□□□□□ -1.33
CPSF7-220ENST00000541963 VAMP4O75379 141 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 IGLV1-40P01703 118 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 ITGAVP06756 1048 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 H2AFB1P0C5Y9 115 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 H2AFB2P0C5Z0 115 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 FAM153BP0C7A2 387 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 ZNF445P59923 1031 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 EXOSC9Q06265 439 aaKnown RBP6.75□□□□□ -1.33
CPSF7-220ENST00000541963 NMIQ13287 307 aaPredicted RBP6.75□□□□□ -1.33
CPSF7-220ENST00000541963 PPP2R5DQ14738 602 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 PLA2G4EQ3MJ16 856 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 EGFLAMQ63HQ2 1017 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 C16orf86Q6ZW13 317 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 SYNPOQ8N3V7 929 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 DTWD2Q8NBA8 298 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 CCDC191Q8NCU4 936 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 SYTL5Q8TDW5 730 aaPredicted RBP6.75□□□□□ -1.33
CPSF7-220ENST00000541963 ZNF526Q8TF50 670 aaPredicted RBP6.75□□□□□ -1.33
CPSF7-220ENST00000541963 GATA6Q92908 595 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 BRF1Q92994 677 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 MYD88Q99836 296 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 AARSD1Q9BTE6 412 aaKnown RBP6.75□□□□□ -1.33
CPSF7-220ENST00000541963 NOL6Q9H6R4 1146 aaKnown RBP6.75□□□□□ -1.33
CPSF7-220ENST00000541963 CHST7Q9NS84 486 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 GPATCH2Q9NW75 528 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 GFOD1Q9NXC2 390 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 CWC25Q9NXE8 425 aaPredicted RBP6.75□□□□□ -1.33
CPSF7-220ENST00000541963 LEMD3Q9Y2U8 911 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 RIC1Q4ADV7 1423 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 ANKRD31Q8N7Z5 1873 aa6.75□□□□□ -1.33
CPSF7-220ENST00000541963 A0A1W2PQU0 124 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 SSU72P8A0A1W2PR75 194 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 PI4KAP2A4QPH2 592 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 SIGLEC6O43699 453 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 F13BP05160 661 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 ZNF865P0CJ78 1059 aaPredicted RBP6.74□□□□□ -1.33
CPSF7-220ENST00000541963 FSTP19883 344 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 DOC2BQ14184 412 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 TCEA2Q15560 299 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 CPSF6Q16630 551 aaKnown RBP eCLIP6.74□□□□□ -1.33
CPSF7-220ENST00000541963 TMEM67Q5HYA8 995 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 RNF187Q5TA31 235 aaPredicted RBP6.74□□□□□ -1.33
CPSF7-220ENST00000541963 FAM214BQ7L5A3 538 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 C16orf71Q8IYS4 520 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms