RNA–Protein interactions for RNA: ENST00000541899.1

LRTOMT-219, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-219ENST00000541899 SPATA33Q96N06 139 aa17.5■□□□□ 0.39
LRTOMT-219ENST00000541899 GBP4Q96PP9 640 aa17.5■□□□□ 0.39
LRTOMT-219ENST00000541899 GPR20Q99678 358 aa17.5■□□□□ 0.39
LRTOMT-219ENST00000541899 AP5M1Q9H0R1 490 aa17.5■□□□□ 0.39
LRTOMT-219ENST00000541899 PCDHA7Q9UN72 937 aa17.5■□□□□ 0.39
LRTOMT-219ENST00000541899 WDR81Q562E7 1941 aa17.49■□□□□ 0.39
LRTOMT-219ENST00000541899 IGKV6D-21A0A0A0MT36 114 aa17.49■□□□□ 0.39
LRTOMT-219ENST00000541899 GSTTP1A0A1W2PQM5 241 aa17.49■□□□□ 0.39
LRTOMT-219ENST00000541899 SLC26A4O43511 780 aa17.49■□□□□ 0.39
LRTOMT-219ENST00000541899 PPFIA4O75335 1185 aa17.49■□□□□ 0.39
LRTOMT-219ENST00000541899 CCL5P13501 91 aa17.49■□□□□ 0.39
LRTOMT-219ENST00000541899 ACTR2P61160 394 aa17.49■□□□□ 0.39
LRTOMT-219ENST00000541899 EPHA7Q15375 998 aa17.49■□□□□ 0.39
LRTOMT-219ENST00000541899 AXDND1Q5T1B0 1012 aaPredicted RBP17.49■□□□□ 0.39
LRTOMT-219ENST00000541899 GJC2Q5T442 439 aaPredicted RBP17.49■□□□□ 0.39
LRTOMT-219ENST00000541899 ADALQ6DHV7 355 aa17.49■□□□□ 0.39
LRTOMT-219ENST00000541899 UIMC1Q96RL1 719 aa17.49■□□□□ 0.39
LRTOMT-219ENST00000541899 MCOLN1Q9GZU1 580 aa17.49■□□□□ 0.39
LRTOMT-219ENST00000541899 UNC93B1Q9H1C4 597 aa17.49■□□□□ 0.39
LRTOMT-219ENST00000541899 SPC25Q9HBM1 224 aa17.49■□□□□ 0.39
LRTOMT-219ENST00000541899 DISC1Q9NRI5 854 aa17.49■□□□□ 0.39
LRTOMT-219ENST00000541899 LRWD1Q9UFC0 647 aa17.49■□□□□ 0.39
LRTOMT-219ENST00000541899 PCDHA10Q9Y5I2 948 aa17.49■□□□□ 0.39
LRTOMT-219ENST00000541899 DDX39AO00148 427 aaKnown RBP17.48■□□□□ 0.39
LRTOMT-219ENST00000541899 EML1O00423 815 aa17.48■□□□□ 0.39
LRTOMT-219ENST00000541899 NOP56O00567 594 aaKnown RBP17.48■□□□□ 0.39
LRTOMT-219ENST00000541899 CTAGE5O15320 804 aa17.48■□□□□ 0.39
LRTOMT-219ENST00000541899 ADAMTS4O75173 837 aa17.48■□□□□ 0.39
LRTOMT-219ENST00000541899 PSAPP07602 524 aa17.48■□□□□ 0.39
LRTOMT-219ENST00000541899 MUTP22033 750 aa17.48■□□□□ 0.39
LRTOMT-219ENST00000541899 CST5P28325 142 aaPredicted RBP17.48■□□□□ 0.39
LRTOMT-219ENST00000541899 ME1P48163 572 aa17.48■□□□□ 0.39
LRTOMT-219ENST00000541899 CPT1AP50416 773 aa17.48■□□□□ 0.39
LRTOMT-219ENST00000541899 MTFR1Q15390 333 aa17.48■□□□□ 0.39
LRTOMT-219ENST00000541899 BRDTQ58F21 947 aaPredicted RBP17.48■□□□□ 0.39
LRTOMT-219ENST00000541899 MIER3Q7Z3K6 550 aa17.48■□□□□ 0.39
LRTOMT-219ENST00000541899 KLHDC9Q8NEP7 349 aa17.48■□□□□ 0.39
LRTOMT-219ENST00000541899 ERMNQ8TAM6 284 aa17.48■□□□□ 0.39
LRTOMT-219ENST00000541899 NEK9Q8TD19 979 aa17.48■□□□□ 0.39
LRTOMT-219ENST00000541899 AFG1LQ8WV93 481 aa17.48■□□□□ 0.39
LRTOMT-219ENST00000541899 CSRNP2Q9H175 543 aa17.48■□□□□ 0.39
LRTOMT-219ENST00000541899 XPNPEP3Q9NQH7 507 aa17.48■□□□□ 0.39
LRTOMT-219ENST00000541899 SYNRGQ9UMZ2 1314 aa17.47■□□□□ 0.39
LRTOMT-219ENST00000541899 POTEMA6NI47 508 aa17.47■□□□□ 0.39
LRTOMT-219ENST00000541899 KPNA6O60684 536 aa17.47■□□□□ 0.39
LRTOMT-219ENST00000541899 LGR5O75473 907 aa17.47■□□□□ 0.39
LRTOMT-219ENST00000541899 MMP3P08254 477 aa17.47■□□□□ 0.39
LRTOMT-219ENST00000541899 SUPT20HL2P0C7V6 817 aa17.47■□□□□ 0.39
LRTOMT-219ENST00000541899 GRIN1Q05586 938 aa17.47■□□□□ 0.39
LRTOMT-219ENST00000541899 DGKDQ16760 1214 aa17.47■□□□□ 0.39
LRTOMT-219ENST00000541899 NCAPH2Q6IBW4 605 aa17.47■□□□□ 0.39
LRTOMT-219ENST00000541899 MIS18BP1Q6P0N0 1132 aa17.47■□□□□ 0.39
LRTOMT-219ENST00000541899 KCTD17Q8N5Z5 321 aa17.47■□□□□ 0.39
LRTOMT-219ENST00000541899 AFAP1L1Q8TED9 768 aa17.47■□□□□ 0.39
LRTOMT-219ENST00000541899 CLIC6Q96NY7 704 aa17.47■□□□□ 0.39
LRTOMT-219ENST00000541899 HSD17B14Q9BPX1 270 aa17.47■□□□□ 0.39
LRTOMT-219ENST00000541899 POLR3CQ9BUI4 534 aaPredicted RBP17.47■□□□□ 0.39
LRTOMT-219ENST00000541899 CCSER1Q9C0I3 900 aa17.47■□□□□ 0.39
LRTOMT-219ENST00000541899 RNF208Q9H0X6 261 aa17.47■□□□□ 0.39
LRTOMT-219ENST00000541899 GDPD2Q9HCC8 539 aa17.47■□□□□ 0.39
LRTOMT-219ENST00000541899 EMSYQ7Z589 1322 aa17.47■□□□□ 0.39
LRTOMT-219ENST00000541899 A0A1W2PQ27 194 aa17.46■□□□□ 0.39
LRTOMT-219ENST00000541899 A0A1W2PQ64 194 aa17.46■□□□□ 0.39
LRTOMT-219ENST00000541899 A0A1W2PQD8 194 aa17.46■□□□□ 0.39
LRTOMT-219ENST00000541899 CHMP2AO43633 222 aa17.46■□□□□ 0.39
LRTOMT-219ENST00000541899 P4HBP07237 508 aaKnown RBP17.46■□□□□ 0.39
LRTOMT-219ENST00000541899 PTGS1P23219 599 aa17.46■□□□□ 0.39
LRTOMT-219ENST00000541899 RPA1P27694 616 aa17.46■□□□□ 0.39
LRTOMT-219ENST00000541899 TCF7P36402 384 aaPredicted RBP17.46■□□□□ 0.39
LRTOMT-219ENST00000541899 FSCN1Q16658 493 aaKnown RBP17.46■□□□□ 0.39
LRTOMT-219ENST00000541899 HAUS3Q68CZ6 603 aa17.46■□□□□ 0.39
LRTOMT-219ENST00000541899 CCSAPQ6IQ19 270 aaPredicted RBP17.46■□□□□ 0.39
LRTOMT-219ENST00000541899 PLPPR4Q7Z2D5 763 aa17.46■□□□□ 0.39
LRTOMT-219ENST00000541899 LENG1Q96BZ8 264 aaPredicted RBP17.46■□□□□ 0.39
LRTOMT-219ENST00000541899 EIF2AK1Q9BQI3 630 aaKnown RBP17.46■□□□□ 0.39
LRTOMT-219ENST00000541899 TUFT1Q9NNX1 390 aa17.46■□□□□ 0.39
LRTOMT-219ENST00000541899 TELO2Q9Y4R8 837 aa17.46■□□□□ 0.39
LRTOMT-219ENST00000541899 SAMM50Q9Y512 469 aa17.46■□□□□ 0.39
LRTOMT-219ENST00000541899 MAFBQ9Y5Q3 323 aaPredicted RBP17.46■□□□□ 0.39
LRTOMT-219ENST00000541899 CENPFP49454 3210 aa17.45■□□□□ 0.38
LRTOMT-219ENST00000541899 ZEB2O60315 1214 aa17.45■□□□□ 0.38
LRTOMT-219ENST00000541899 SORBS3O60504 671 aa17.45■□□□□ 0.38
LRTOMT-219ENST00000541899 DKC1O60832 514 aaKnown RBP eCLIP17.45■□□□□ 0.38
LRTOMT-219ENST00000541899 GJB1P08034 283 aa17.45■□□□□ 0.38
LRTOMT-219ENST00000541899 C6orf222P0C671 652 aaPredicted RBP17.45■□□□□ 0.38
LRTOMT-219ENST00000541899 CMA1P23946 247 aa17.45■□□□□ 0.38
LRTOMT-219ENST00000541899 SLC26A2P50443 739 aa17.45■□□□□ 0.38
LRTOMT-219ENST00000541899 HYIQ5T013 277 aa17.45■□□□□ 0.38
LRTOMT-219ENST00000541899 KRT79Q5XKE5 535 aa17.45■□□□□ 0.38
LRTOMT-219ENST00000541899 RNF180Q86T96 592 aa17.45■□□□□ 0.38
LRTOMT-219ENST00000541899 PCSK9Q8NBP7 692 aaKnown RBP17.45■□□□□ 0.38
LRTOMT-219ENST00000541899 ARRDC4Q8NCT1 418 aa17.45■□□□□ 0.38
LRTOMT-219ENST00000541899 TSEN34Q9BSV6 310 aaKnown RBP17.45■□□□□ 0.38
LRTOMT-219ENST00000541899 MMTAG2Q9BU76 263 aaKnown RBP17.45■□□□□ 0.38
LRTOMT-219ENST00000541899 CRISPLD2Q9H0B8 497 aa17.45■□□□□ 0.38
LRTOMT-219ENST00000541899 OGDHLQ9ULD0 1010 aa17.45■□□□□ 0.38
LRTOMT-219ENST00000541899 MYH9P35579 1960 aaKnown RBP17.44■□□□□ 0.38
LRTOMT-219ENST00000541899 FAM237AA0A1B0GTK4 181 aa17.44■□□□□ 0.38
LRTOMT-219ENST00000541899 SLITRK3O94933 977 aa17.44■□□□□ 0.38
LRTOMT-219ENST00000541899 LYPLA2O95372 231 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms