RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 KANK3Q6NY19 840 aa11.47□□□□□ -0.57
CHFR-220ENST00000541817 CRIPAKQ8N1N5 446 aa11.47□□□□□ -0.57
CHFR-220ENST00000541817 RHPN1Q8TCX5 695 aa11.47□□□□□ -0.57
CHFR-220ENST00000541817 ZFP91Q96JP5 570 aaPredicted RBP11.47□□□□□ -0.57
CHFR-220ENST00000541817 SETD4Q9NVD3 440 aa11.47□□□□□ -0.57
CHFR-220ENST00000541817 COL20A1Q9P218 1284 aa11.47□□□□□ -0.57
CHFR-220ENST00000541817 SPTBN2O15020 2390 aa11.47□□□□□ -0.57
CHFR-220ENST00000541817 APPP05067 770 aa11.46□□□□□ -0.57
CHFR-220ENST00000541817 IFIT2P09913 472 aaKnown RBP11.46□□□□□ -0.57
CHFR-220ENST00000541817 LAMC2Q13753 1193 aa11.46□□□□□ -0.57
CHFR-220ENST00000541817 ACAP1Q15027 740 aa11.46□□□□□ -0.57
CHFR-220ENST00000541817 KIAA0319Q5VV43 1072 aa11.46□□□□□ -0.57
CHFR-220ENST00000541817 PLPP4Q5VZY2 271 aa11.46□□□□□ -0.57
CHFR-220ENST00000541817 TRMT2AQ8IZ69 625 aaKnown RBP11.46□□□□□ -0.57
CHFR-220ENST00000541817 PPTC7Q8NI37 304 aa11.46□□□□□ -0.57
CHFR-220ENST00000541817 FEZF2Q8TBJ5 459 aa11.46□□□□□ -0.57
CHFR-220ENST00000541817 LINC01599Q8WXQ3 324 aa11.46□□□□□ -0.57
CHFR-220ENST00000541817 C16orf70Q9BSU1 422 aa11.46□□□□□ -0.57
CHFR-220ENST00000541817 SEMA4AQ9H3S1 761 aa11.46□□□□□ -0.57
CHFR-220ENST00000541817 BCAS3Q9H6U6 928 aa11.46□□□□□ -0.57
CHFR-220ENST00000541817 ERVK-5Q9HDB9 667 aa11.46□□□□□ -0.57
CHFR-220ENST00000541817 IL17RBQ9NRM6 502 aa11.46□□□□□ -0.57
CHFR-220ENST00000541817 HCSTQ9UBK5 93 aa11.46□□□□□ -0.57
CHFR-220ENST00000541817 MRVI1Q9Y6F6 885 aa11.46□□□□□ -0.57
CHFR-220ENST00000541817 TTC3P53804 2025 aa11.46□□□□□ -0.57
CHFR-220ENST00000541817 CEP250Q9BV73 2442 aa11.46□□□□□ -0.58
CHFR-220ENST00000541817 B4DLN1 442 aa11.45□□□□□ -0.58
CHFR-220ENST00000541817 EIF2AK2P19525 551 aaKnown RBP11.45□□□□□ -0.58
CHFR-220ENST00000541817 MRPL12P52815 198 aaKnown RBP11.45□□□□□ -0.58
CHFR-220ENST00000541817 KCNC3Q14003 757 aa11.45□□□□□ -0.58
CHFR-220ENST00000541817 LPIN1Q14693 890 aa11.45□□□□□ -0.58
CHFR-220ENST00000541817 STXBP2Q15833 593 aa11.45□□□□□ -0.58
CHFR-220ENST00000541817 NAALADL2Q58DX5 795 aa11.45□□□□□ -0.58
CHFR-220ENST00000541817 SPECC1Q5M775 1068 aa11.45□□□□□ -0.58
CHFR-220ENST00000541817 SPOUT1Q5T280 376 aaKnown RBP11.45□□□□□ -0.58
CHFR-220ENST00000541817 RTN4RL1Q86UN2 441 aaPredicted RBP11.45□□□□□ -0.58
CHFR-220ENST00000541817 ERC1Q8IUD2 1116 aa11.45□□□□□ -0.58
CHFR-220ENST00000541817 CMTR2Q8IYT2 770 aaKnown RBP11.45□□□□□ -0.58
CHFR-220ENST00000541817 SIX5Q8N196 739 aa11.45□□□□□ -0.58
CHFR-220ENST00000541817 OSBP2Q969R2 916 aa11.45□□□□□ -0.58
CHFR-220ENST00000541817 SPATA33Q96N06 139 aa11.45□□□□□ -0.58
CHFR-220ENST00000541817 SH2B1Q9NRF2 756 aaPredicted RBP11.45□□□□□ -0.58
CHFR-220ENST00000541817 PLIN4Q96Q06 1357 aa11.44□□□□□ -0.58
CHFR-220ENST00000541817 MYSM1Q5VVJ2 828 aa11.44□□□□□ -0.58
CHFR-220ENST00000541817 C12orf76Q8N812 135 aaPredicted RBP11.44□□□□□ -0.58
CHFR-220ENST00000541817 GPKOWQ92917 476 aaPredicted RBP eCLIP11.44□□□□□ -0.58
CHFR-220ENST00000541817 EMID1Q96A84 441 aaPredicted RBP11.44□□□□□ -0.58
CHFR-220ENST00000541817 CPVLQ9H3G5 476 aa11.44□□□□□ -0.58
CHFR-220ENST00000541817 ZNF287Q9HBT7 754 aa11.44□□□□□ -0.58
CHFR-220ENST00000541817 TMEM260Q9NX78 707 aa11.44□□□□□ -0.58
CHFR-220ENST00000541817 FBXL21Q9UKT6 434 aa11.44□□□□□ -0.58
CHFR-220ENST00000541817 USP24Q9UPU5 2620 aa11.44□□□□□ -0.58
CHFR-220ENST00000541817 HIDE1A8MVS5 230 aa11.43□□□□□ -0.58
CHFR-220ENST00000541817 H3BRB1 525 aa11.43□□□□□ -0.58
CHFR-220ENST00000541817 IPO8O15397 1037 aaKnown RBP11.43□□□□□ -0.58
CHFR-220ENST00000541817 PPFIA4O75335 1185 aa11.43□□□□□ -0.58
CHFR-220ENST00000541817 GGPS1O95749 300 aa11.43□□□□□ -0.58
CHFR-220ENST00000541817 ADRB1P08588 477 aa11.43□□□□□ -0.58
CHFR-220ENST00000541817 SP9P0CG40 484 aa11.43□□□□□ -0.58
CHFR-220ENST00000541817 MYCLP12524 364 aaPredicted RBP11.43□□□□□ -0.58
CHFR-220ENST00000541817 SP2Q02086 613 aa11.43□□□□□ -0.58
CHFR-220ENST00000541817 FAM26DQ5JW98 314 aa11.43□□□□□ -0.58
CHFR-220ENST00000541817 CEP85Q6P2H3 762 aa11.43□□□□□ -0.58
CHFR-220ENST00000541817 GIMAP6Q6P9H5 292 aa11.43□□□□□ -0.58
CHFR-220ENST00000541817 BTNL9Q6UXG8 535 aa11.43□□□□□ -0.58
CHFR-220ENST00000541817 RUFY4Q6ZNE9 571 aa11.43□□□□□ -0.58
CHFR-220ENST00000541817 CLASRPQ8N2M8 674 aaKnown RBP11.43□□□□□ -0.58
CHFR-220ENST00000541817 SUMF1Q8NBK3 374 aa11.43□□□□□ -0.58
CHFR-220ENST00000541817 SYTL5Q8TDW5 730 aaPredicted RBP11.43□□□□□ -0.58
CHFR-220ENST00000541817 DCAF4Q8WV16 495 aa11.43□□□□□ -0.58
CHFR-220ENST00000541817 RTP3Q9BQQ7 232 aa11.43□□□□□ -0.58
CHFR-220ENST00000541817 TUT1Q9H6E5 874 aaKnown RBP11.43□□□□□ -0.58
CHFR-220ENST00000541817 TELO2Q9Y4R8 837 aa11.43□□□□□ -0.58
CHFR-220ENST00000541817 ATRXP46100 2492 aa11.43□□□□□ -0.58
CHFR-220ENST00000541817 CHD8Q9HCK8 2581 aa11.42□□□□□ -0.58
CHFR-220ENST00000541817 TSPY2A6NKD2 308 aa11.42□□□□□ -0.58
CHFR-220ENST00000541817 M0R2C6 588 aa11.42□□□□□ -0.58
CHFR-220ENST00000541817 NARSO43776 548 aaKnown RBP11.42□□□□□ -0.58
CHFR-220ENST00000541817 FGF18O76093 207 aa11.42□□□□□ -0.58
CHFR-220ENST00000541817 LGALS2P05162 132 aa11.42□□□□□ -0.58
CHFR-220ENST00000541817 DCNP07585 359 aaKnown RBP11.42□□□□□ -0.58
CHFR-220ENST00000541817 CT47B1P0C2W7 299 aaPredicted RBP11.42□□□□□ -0.58
CHFR-220ENST00000541817 SRGAP2BP0DMP2 458 aa11.42□□□□□ -0.58
CHFR-220ENST00000541817 MS4A1P11836 297 aa11.42□□□□□ -0.58
CHFR-220ENST00000541817 HOXD8P13378 290 aaPredicted RBP11.42□□□□□ -0.58
CHFR-220ENST00000541817 HOXC8P31273 242 aa11.42□□□□□ -0.58
CHFR-220ENST00000541817 ANP32AP39687 249 aaKnown RBP11.42□□□□□ -0.58
CHFR-220ENST00000541817 ARHGAP4P98171 946 aa11.42□□□□□ -0.58
CHFR-220ENST00000541817 CTDSPL2Q05D32 466 aa11.42□□□□□ -0.58
CHFR-220ENST00000541817 CELF3Q5SZQ8 465 aaKnown RBP11.42□□□□□ -0.58
CHFR-220ENST00000541817 RARS2Q5T160 578 aaKnown RBP11.42□□□□□ -0.58
CHFR-220ENST00000541817 ARHGEF16Q5VV41 709 aa11.42□□□□□ -0.58
CHFR-220ENST00000541817 TMEM184AQ6ZMB5 413 aa11.42□□□□□ -0.58
CHFR-220ENST00000541817 TRIM50Q86XT4 487 aa11.42□□□□□ -0.58
CHFR-220ENST00000541817 IFNL3Q8IZI9 196 aa11.42□□□□□ -0.58
CHFR-220ENST00000541817 TDRD5Q8NAT2 981 aaKnown RBP11.42□□□□□ -0.58
CHFR-220ENST00000541817 NSUN6Q8TEA1 469 aaKnown RBP11.42□□□□□ -0.58
CHFR-220ENST00000541817 RMDN3Q96TC7 470 aa11.42□□□□□ -0.58
CHFR-220ENST00000541817 CDCA3Q99618 268 aaPredicted RBP11.42□□□□□ -0.58
CHFR-220ENST00000541817 EHMT1Q9H9B1 1298 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms