RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 RBM28Q9NW13 759 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 COL20A1Q9P218 1284 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 DDX41Q9UJV9 622 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 BRPF3Q9ULD4 1205 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 ABCB11O95342 1321 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 EMSYQ7Z589 1322 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 DOCK5Q9H7D0 1870 aa10.02□□□□□ -0.81
CLSTN3-212ENST00000541770 H3BNC9 293 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 ZBTB43O43298 467 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 F2P00734 622 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 CTSHP09668 335 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 MYCLP12524 364 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 IRS1P35568 1242 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 HTRA4P83105 476 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 APOBRQ0VD83 1088 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 LAMC2Q13753 1193 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 TRIM71Q2Q1W2 868 aaKnown RBP10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 TRAF7Q6Q0C0 670 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 RPAINQ86UA6 219 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 MICU3Q86XE3 530 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 MCF2L2Q86YR7 1114 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 ADHFE1Q8IWW8 467 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 TMEM192Q8IY95 271 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 ADGRF4Q8IZF3 695 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 SEPT8Q92599 483 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 ATP6V0A1Q93050 837 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 MTMR8Q96EF0 704 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 ZNF274Q96GC6 653 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 MFSD14AQ96MC6 490 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 SPZ1Q9BXG8 430 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 KCNH6Q9H252 994 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 IGFLR1Q9H665 355 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 RIOX1Q9H6W3 641 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 VAT1LQ9HCJ6 419 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 PRKAG3Q9UGI9 489 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 MUTYHQ9UIF7 546 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 BRWD1Q9NSI6 2320 aa10.01□□□□□ -0.81
CLSTN3-212ENST00000541770 MUC6Q6W4X9 2439 aa10□□□□□ -0.81
CLSTN3-212ENST00000541770 CCDC196A0A1B0GTZ2 297 aa10□□□□□ -0.81
CLSTN3-212ENST00000541770 POTEB3A0JP26 581 aa10□□□□□ -0.81
CLSTN3-212ENST00000541770 C17orf102A2RUQ5 167 aa10□□□□□ -0.81
CLSTN3-212ENST00000541770 HAS3O00219 553 aa10□□□□□ -0.81
CLSTN3-212ENST00000541770 CFBP00751 764 aa10□□□□□ -0.81
CLSTN3-212ENST00000541770 PDIA3P30101 505 aaKnown RBP10□□□□□ -0.81
CLSTN3-212ENST00000541770 CTNNB1P35222 781 aa10□□□□□ -0.81
CLSTN3-212ENST00000541770 METAP2P50579 478 aaKnown RBP eCLIP10□□□□□ -0.81
CLSTN3-212ENST00000541770 NEK4P51957 841 aa10□□□□□ -0.81
CLSTN3-212ENST00000541770 HIC1Q14526 733 aa10□□□□□ -0.81
CLSTN3-212ENST00000541770 RABEP1Q15276 862 aa10□□□□□ -0.81
CLSTN3-212ENST00000541770 PLEKHG4Q58EX7 1191 aa10□□□□□ -0.81
CLSTN3-212ENST00000541770 POTEBQ6S5H4 581 aa10□□□□□ -0.81
CLSTN3-212ENST00000541770 FBXO11Q86XK2 927 aa10□□□□□ -0.81
CLSTN3-212ENST00000541770 RGS22Q8NE09 1264 aa10□□□□□ -0.81
CLSTN3-212ENST00000541770 PPTC7Q8NI37 304 aa10□□□□□ -0.81
CLSTN3-212ENST00000541770 SP7Q8TDD2 431 aaPredicted RBP10□□□□□ -0.81
CLSTN3-212ENST00000541770 SNX27Q96L92 541 aa10□□□□□ -0.81
CLSTN3-212ENST00000541770 SPATA33Q96N06 139 aa10□□□□□ -0.81
CLSTN3-212ENST00000541770 IWS1Q96ST2 819 aa10□□□□□ -0.81
CLSTN3-212ENST00000541770 IFIH1Q9BYX4 1025 aaKnown RBP10□□□□□ -0.81
CLSTN3-212ENST00000541770 JMJD4Q9H9V9 463 aa10□□□□□ -0.81
CLSTN3-212ENST00000541770 GOLGA8AA7E2F4 631 aa9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 GOLGA8BA8MQT2 603 aa9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 CYTH3O43739 400 aa9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 EIF3JO75822 258 aaKnown RBP9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 GGPS1O95749 300 aa9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 NR3C2P08235 984 aa9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 RXRAP19793 462 aa9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 AK2P54819 239 aa9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 RTN1Q16799 776 aa9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 SLC35G1Q2M3R5 365 aa9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 TMTC3Q6ZXV5 915 aa9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 FIBCD1Q8N539 461 aa9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 SRBD1Q8N5C6 995 aaKnown RBP9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 TOP1MTQ969P6 601 aa9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 ZFP91Q96JP5 570 aaPredicted RBP9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 PHOX2BQ99453 314 aa9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 MLXIPQ9HAP2 919 aa9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 PXMP2Q9NR77 195 aa9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 FAM217BQ9NTX9 383 aaPredicted RBP9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 MRPL11Q9Y3B7 192 aaKnown RBP9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 KAT6AQ92794 2004 aa9.99□□□□□ -0.81
CLSTN3-212ENST00000541770 C19orf67A6NJJ6 358 aa9.98□□□□□ -0.81
CLSTN3-212ENST00000541770 STXBP3O00186 592 aa9.98□□□□□ -0.81
CLSTN3-212ENST00000541770 ZBTB5O15062 677 aa9.98□□□□□ -0.81
CLSTN3-212ENST00000541770 TREHO43280 583 aa9.98□□□□□ -0.81
CLSTN3-212ENST00000541770 MBTPS2O43462 519 aa9.98□□□□□ -0.81
CLSTN3-212ENST00000541770 PPFIA4O75335 1185 aa9.98□□□□□ -0.81
CLSTN3-212ENST00000541770 PLEKHA8P1O95397 391 aa9.98□□□□□ -0.81
CLSTN3-212ENST00000541770 CDC27P30260 824 aa9.98□□□□□ -0.81
CLSTN3-212ENST00000541770 DLX2Q07687 328 aaPredicted RBP9.98□□□□□ -0.81
CLSTN3-212ENST00000541770 FUT2Q10981 343 aa9.98□□□□□ -0.81
CLSTN3-212ENST00000541770 TRAF1Q13077 416 aa9.98□□□□□ -0.81
CLSTN3-212ENST00000541770 QRICH1Q2TAL8 776 aa9.98□□□□□ -0.81
CLSTN3-212ENST00000541770 HSDL1Q3SXM5 330 aa9.98□□□□□ -0.81
CLSTN3-212ENST00000541770 SERINC5Q86VE9 423 aa9.98□□□□□ -0.81
CLSTN3-212ENST00000541770 RAB11FIP4Q86YS3 637 aa9.98□□□□□ -0.81
CLSTN3-212ENST00000541770 RNF135Q8IUD6 432 aa9.98□□□□□ -0.81
CLSTN3-212ENST00000541770 EMID1Q96A84 441 aaPredicted RBP9.98□□□□□ -0.81
CLSTN3-212ENST00000541770 POP1Q99575 1024 aaKnown RBP9.98□□□□□ -0.81
CLSTN3-212ENST00000541770 OSBPL7Q9BZF2 842 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms