RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 IPO9Q96P70 1041 aaKnown RBP6.09□□□□□ -1.43
PRKDC-210ENST00000541488 ALG1Q9BT22 464 aa6.09□□□□□ -1.43
PRKDC-210ENST00000541488 C1QTNF3Q9BXJ4 246 aa6.09□□□□□ -1.43
PRKDC-210ENST00000541488 DSEQ9UL01 958 aa6.09□□□□□ -1.43
PRKDC-210ENST00000541488 INVSQ9Y283 1065 aa6.09□□□□□ -1.43
PRKDC-210ENST00000541488 PCDHA8Q9Y5H6 950 aa6.09□□□□□ -1.43
PRKDC-210ENST00000541488 ZNF536O15090 1300 aa6.08□□□□□ -1.44
PRKDC-210ENST00000541488 FAM47E-STBD1D6RA91 191 aa6.08□□□□□ -1.44
PRKDC-210ENST00000541488 KCNK3O14649 394 aa6.08□□□□□ -1.44
PRKDC-210ENST00000541488 ZNF28P17035 718 aa6.08□□□□□ -1.44
PRKDC-210ENST00000541488 KRT15P19012 456 aa6.08□□□□□ -1.44
PRKDC-210ENST00000541488 PAN2Q504Q3 1202 aaKnown RBP6.08□□□□□ -1.44
PRKDC-210ENST00000541488 VASNQ6EMK4 673 aa6.08□□□□□ -1.44
PRKDC-210ENST00000541488 PROSER1Q86XN7 944 aa6.08□□□□□ -1.44
PRKDC-210ENST00000541488 TRIM48Q8IWZ4 208 aa6.08□□□□□ -1.44
PRKDC-210ENST00000541488 UHMK1Q8TAS1 419 aaKnown RBP6.08□□□□□ -1.44
PRKDC-210ENST00000541488 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.08□□□□□ -1.44
PRKDC-210ENST00000541488 ZCCHC14Q8WYQ9 949 aaKnown RBP6.08□□□□□ -1.44
PRKDC-210ENST00000541488 EXOC2Q96KP1 924 aa6.08□□□□□ -1.44
PRKDC-210ENST00000541488 C8orf49Q96NF6 230 aa6.08□□□□□ -1.44
PRKDC-210ENST00000541488 ZFYVE21Q9BQ24 234 aa6.08□□□□□ -1.44
PRKDC-210ENST00000541488 CCDC113Q9H0I3 377 aa6.08□□□□□ -1.44
PRKDC-210ENST00000541488 SIRPGQ9P1W8 387 aa6.08□□□□□ -1.44
PRKDC-210ENST00000541488 ZDHHC9Q9Y397 364 aa6.08□□□□□ -1.44
PRKDC-210ENST00000541488 CKMP06732 381 aa6.07□□□□□ -1.44
PRKDC-210ENST00000541488 PYGMP11217 842 aa6.07□□□□□ -1.44
PRKDC-210ENST00000541488 GUCY1A3Q02108 690 aa6.07□□□□□ -1.44
PRKDC-210ENST00000541488 KIAA2012Q0VF49 1180 aa6.07□□□□□ -1.44
PRKDC-210ENST00000541488 FAM26FQ5R3K3 315 aa6.07□□□□□ -1.44
PRKDC-210ENST00000541488 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-210ENST00000541488 FAM124AQ86V42 546 aa6.07□□□□□ -1.44
PRKDC-210ENST00000541488 SCUBE1Q8IWY4 988 aa6.07□□□□□ -1.44
PRKDC-210ENST00000541488 ZBTB38Q8NAP3 1195 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-210ENST00000541488 LCORQ96JN0 433 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-210ENST00000541488 DEPDC7Q96QD5 511 aa6.07□□□□□ -1.44
PRKDC-210ENST00000541488 TMEM209Q96SK2 561 aa6.07□□□□□ -1.44
PRKDC-210ENST00000541488 RBM15Q96T37 977 aaKnown RBP eCLIP6.07□□□□□ -1.44
PRKDC-210ENST00000541488 TMEM168Q9H0V1 697 aa6.07□□□□□ -1.44
PRKDC-210ENST00000541488 PCDHA9Q9Y5H5 950 aa6.07□□□□□ -1.44
PRKDC-210ENST00000541488 TCRBV5S4A2TA0A5A2 114 aa6.06□□□□□ -1.44
PRKDC-210ENST00000541488 C6orf222P0C671 652 aaPredicted RBP6.06□□□□□ -1.44
PRKDC-210ENST00000541488 FAHP16930 419 aa6.06□□□□□ -1.44
PRKDC-210ENST00000541488 RASA3Q14644 834 aa6.06□□□□□ -1.44
PRKDC-210ENST00000541488 TBC1D10BQ4KMP7 808 aaPredicted RBP6.06□□□□□ -1.44
PRKDC-210ENST00000541488 CYP4F22Q6NT55 531 aa6.06□□□□□ -1.44
PRKDC-210ENST00000541488 BORAQ6PGQ7 559 aa6.06□□□□□ -1.44
PRKDC-210ENST00000541488 KCTD1Q719H9 257 aa6.06□□□□□ -1.44
PRKDC-210ENST00000541488 SH3RF2Q8TEC5 729 aa6.06□□□□□ -1.44
PRKDC-210ENST00000541488 C8orf37Q96NL8 207 aa6.06□□□□□ -1.44
PRKDC-210ENST00000541488 SRPK1Q96SB4 655 aaKnown RBP6.06□□□□□ -1.44
PRKDC-210ENST00000541488 HIRIP3Q9BW71 556 aaPredicted RBP6.06□□□□□ -1.44
PRKDC-210ENST00000541488 CATSPERZQ9NTU4 200 aa6.06□□□□□ -1.44
PRKDC-210ENST00000541488 SNTG2Q9NY99 539 aa6.06□□□□□ -1.44
PRKDC-210ENST00000541488 AQP7O14520 342 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 DNM2P50570 870 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 SUMO1P63165 101 aaKnown RBP6.05□□□□□ -1.44
PRKDC-210ENST00000541488 PFKPQ01813 784 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 PAK1Q13153 545 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 SKIDA1Q1XH10 827 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 CD276Q5ZPR3 534 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 LIMS2Q7Z4I7 341 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 LGI4Q8N135 537 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 STPG3Q8N7X2 389 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 NUDT10Q8NFP7 164 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 PTPRN2Q92932 1015 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 ZNF669Q96BR6 464 aaPredicted RBP6.05□□□□□ -1.44
PRKDC-210ENST00000541488 NUDT11Q96G61 164 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 LOXL4Q96JB6 756 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 YTHDC1Q96MU7 727 aaKnown RBP6.05□□□□□ -1.44
PRKDC-210ENST00000541488 DNAJC7Q99615 494 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 DHRS4Q9BTZ2 278 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 SLC39A2Q9NP94 309 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 RIC8BQ9NVN3 520 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 FTSJ1Q9UET6 329 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 NDOR1Q9UHB4 597 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 ZFP69BQ9UJL9 534 aa6.05□□□□□ -1.44
PRKDC-210ENST00000541488 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-210ENST00000541488 ACOT7O00154 380 aa6.04□□□□□ -1.44
PRKDC-210ENST00000541488 B4GALT3O60512 393 aa6.04□□□□□ -1.44
PRKDC-210ENST00000541488 FBXO21O94952 628 aa6.04□□□□□ -1.44
PRKDC-210ENST00000541488 ST5P78524 1137 aa6.04□□□□□ -1.44
PRKDC-210ENST00000541488 SERINC3Q13530 473 aa6.04□□□□□ -1.44
PRKDC-210ENST00000541488 HABP4Q5JVS0 413 aaKnown RBP6.04□□□□□ -1.44
PRKDC-210ENST00000541488 NBPF6Q5VWK0 638 aa6.04□□□□□ -1.44
PRKDC-210ENST00000541488 BTBD8Q5XKL5 378 aa6.04□□□□□ -1.44
PRKDC-210ENST00000541488 CRIP3Q6Q6R5 217 aa6.04□□□□□ -1.44
PRKDC-210ENST00000541488 ARHGAP36Q6ZRI8 547 aa6.04□□□□□ -1.44
PRKDC-210ENST00000541488 DPH6Q7L8W6 267 aa6.04□□□□□ -1.44
PRKDC-210ENST00000541488 MAMDC2Q7Z304 686 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-210ENST00000541488 SPRED1Q7Z699 444 aa6.04□□□□□ -1.44
PRKDC-210ENST00000541488 OSTM1Q86WC4 334 aa6.04□□□□□ -1.44
PRKDC-210ENST00000541488 PTRH1Q86Y79 214 aaKnown RBP6.04□□□□□ -1.44
PRKDC-210ENST00000541488 DTX3Q8N9I9 347 aa6.04□□□□□ -1.44
PRKDC-210ENST00000541488 TTLL11Q8NHH1 800 aa6.04□□□□□ -1.44
PRKDC-210ENST00000541488 NBPF4Q96M43 638 aa6.04□□□□□ -1.44
PRKDC-210ENST00000541488 DNAJC2Q99543 621 aaKnown RBP6.04□□□□□ -1.44
PRKDC-210ENST00000541488 TACO1Q9BSH4 297 aaKnown RBP6.04□□□□□ -1.44
PRKDC-210ENST00000541488 DLL4Q9NR61 685 aa6.04□□□□□ -1.44
PRKDC-210ENST00000541488 ARHGAP20Q9P2F6 1191 aa6.04□□□□□ -1.44
PRKDC-210ENST00000541488 CBLCQ9ULV8 474 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms