RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 LY75O60449 1722 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 PALM3A6NDB9 673 aaPredicted RBP10.61□□□□□ -0.71
CLDN2-202ENST00000540876 ERVV-1B6SEH8 477 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 TMCC1O94876 653 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 CYLC1P35663 651 aaPredicted RBP10.61□□□□□ -0.71
CLDN2-202ENST00000540876 SARSP49591 514 aaKnown RBP10.61□□□□□ -0.71
CLDN2-202ENST00000540876 PABPC4Q13310 644 aaKnown RBP eCLIP10.61□□□□□ -0.71
CLDN2-202ENST00000540876 NFIXQ14938 502 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 PTPAQ15257 358 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 P3H1Q32P28 736 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 OLFML1Q6UWY5 402 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 LRRC34Q8IZ02 419 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 ZNF34Q8IZ26 560 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 RNF10Q8N5U6 811 aaKnown RBP10.61□□□□□ -0.71
CLDN2-202ENST00000540876 UBLCP1Q8WVY7 318 aaPredicted RBP10.61□□□□□ -0.71
CLDN2-202ENST00000540876 PLCB1Q9NQ66 1216 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 PAIP2BQ9ULR5 123 aaKnown RBP10.61□□□□□ -0.71
CLDN2-202ENST00000540876 CHMP2BQ9UQN3 213 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 TNS1Q9HBL0 1735 aaKnown RBP10.61□□□□□ -0.71
CLDN2-202ENST00000540876 MOCS3O95396 460 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 SHBGP04278 402 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 HNRNPCP07910 306 aaKnown RBP eCLIP10.61□□□□□ -0.71
CLDN2-202ENST00000540876 AFMP43652 599 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 PEX5P50542 639 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 COPB1P53618 953 aaKnown RBP10.61□□□□□ -0.71
CLDN2-202ENST00000540876 MCL1Q07820 350 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 IMMTQ16891 758 aaKnown RBP10.61□□□□□ -0.71
CLDN2-202ENST00000540876 CCDC92Q53HC0 331 aaPredicted RBP10.61□□□□□ -0.71
CLDN2-202ENST00000540876 CCNJLQ8IV13 435 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 GBP7Q8N8V2 638 aaPredicted RBP10.61□□□□□ -0.71
CLDN2-202ENST00000540876 TRIML1Q8N9V2 468 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 DNAJC9Q8WXX5 260 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 ABTB1Q969K4 478 aaPredicted RBP10.61□□□□□ -0.71
CLDN2-202ENST00000540876 ZNF274Q96GC6 653 aaPredicted RBP10.61□□□□□ -0.71
CLDN2-202ENST00000540876 IFT74Q96LB3 600 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 AIFM3Q96NN9 605 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 SELENOSQ9BQE4 189 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.61□□□□□ -0.71
CLDN2-202ENST00000540876 FAM129AQ9BZQ8 928 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 CARD9Q9H257 536 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 MLXIPQ9HAP2 919 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 STK32BQ9NY57 414 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 HYOU1Q9Y4L1 999 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 CAPN6Q9Y6Q1 641 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 FAM237AA0A1B0GTK4 181 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 H0Y3Z8 333 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 TCP1P17987 556 aaKnown RBP10.61□□□□□ -0.71
CLDN2-202ENST00000540876 CASP1P29466 404 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 CA8P35219 290 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 TTF1Q15361 905 aaPredicted RBP10.61□□□□□ -0.71
CLDN2-202ENST00000540876 MUM1Q2TAK8 710 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 KRT71Q3SY84 523 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 ERMARDQ5T6L9 678 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 VPS37DQ86XT2 251 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 FAM81BQ96LP2 452 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 KRT12Q99456 494 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 ZNHIT6Q9NWK9 470 aaKnown RBP10.61□□□□□ -0.71
CLDN2-202ENST00000540876 LRWD1Q9UFC0 647 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 TUBGCP4Q9UGJ1 667 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 CTNND2Q9UQB3 1225 aa10.61□□□□□ -0.71
CLDN2-202ENST00000540876 CEP104O60308 925 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 ZBTB7AO95365 584 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 MMEP08473 750 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 GNAZP19086 355 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 HSPA9P38646 679 aaKnown RBP10.6□□□□□ -0.71
CLDN2-202ENST00000540876 RNASE9P60153 205 aaKnown RBP10.6□□□□□ -0.71
CLDN2-202ENST00000540876 COPS2P61201 443 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 ERFEQ4G0M1 354 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 TNNI3KQ59H18 835 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 LRIG3Q6UXM1 1119 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 C3orf67Q6ZVT6 689 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 MIGA2Q7L4E1 593 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 KRI1Q8N9T8 703 aaKnown RBP10.6□□□□□ -0.71
CLDN2-202ENST00000540876 SNRNP27Q8WVK2 155 aaKnown RBP10.6□□□□□ -0.71
CLDN2-202ENST00000540876 SLC35B4Q969S0 331 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 SETDB2Q96T68 719 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 DDX23Q9BUQ8 820 aaKnown RBP10.6□□□□□ -0.71
CLDN2-202ENST00000540876 RAB17Q9H0T7 212 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 FPGT-TNNI3KV9GXZ4 949 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 COL5A3P25940 1745 aaPredicted RBP10.6□□□□□ -0.71
CLDN2-202ENST00000540876 TMEM221A6NGB7 291 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 CACNA2D1P54289 1103 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 TIMM10P62072 90 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 EXOSC10Q01780 885 aaKnown RBP10.6□□□□□ -0.71
CLDN2-202ENST00000540876 NT5DC1Q5TFE4 455 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 WDR59Q6PJI9 974 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 PI16Q6UXB8 463 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 ZNF572Q7Z3I7 529 aaPredicted RBP10.6□□□□□ -0.71
CLDN2-202ENST00000540876 WDR66Q8TBY9 1149 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 CORO1BQ9BR76 489 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 MTA3Q9BTC8 594 aa10.6□□□□□ -0.71
CLDN2-202ENST00000540876 A0A0G2JLW4 131 aa10.59□□□□□ -0.71
CLDN2-202ENST00000540876 ASAP2O43150 1006 aa10.59□□□□□ -0.71
CLDN2-202ENST00000540876 CALB2P22676 271 aa10.59□□□□□ -0.71
CLDN2-202ENST00000540876 CASP7P55210 303 aa10.59□□□□□ -0.71
CLDN2-202ENST00000540876 PTPN12Q05209 780 aaKnown RBP10.59□□□□□ -0.71
CLDN2-202ENST00000540876 GRIN1Q05586 938 aa10.59□□□□□ -0.71
CLDN2-202ENST00000540876 CCDC80Q76M96 950 aa10.59□□□□□ -0.71
CLDN2-202ENST00000540876 PIGWQ7Z7B1 504 aa10.59□□□□□ -0.71
CLDN2-202ENST00000540876 SLC51AQ86UW1 340 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms