RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 FUT8Q9BYC5 575 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 IKZF4Q9H2S9 585 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 ANKZF1Q9H8Y5 726 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 MAGEF1Q9HAY2 307 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 KLRC4O43908 158 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 MYL1P05976 194 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 DLATP10515 647 aaKnown RBP10.84□□□□□ -0.67
PHC1-208ENST00000540574 NPR1P16066 1061 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 EIF2AK2P19525 551 aaKnown RBP10.84□□□□□ -0.67
PHC1-208ENST00000540574 HSPA1LP34931 641 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 VPS41P49754 854 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 STAT2P52630 851 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 STXBP4Q6ZWJ1 553 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 PPM1KQ8N3J5 372 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 RETREG2Q8NC44 543 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 ELMO3Q96BJ8 720 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 DYDC2Q96IM9 177 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 PNMA5Q96PV4 448 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 C7orf25Q9BPX7 421 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 TCHPQ9BT92 498 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 ARHGAP20Q9P2F6 1191 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 PDS5AQ29RF7 1337 aaKnown RBP10.84□□□□□ -0.67
PHC1-208ENST00000540574 GCOM1H8Y6P7 765 aaPredicted RBP10.84□□□□□ -0.67
PHC1-208ENST00000540574 POLR2MP0CAP2 368 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 TCP1P17987 556 aaKnown RBP10.84□□□□□ -0.67
PHC1-208ENST00000540574 PRPHP41219 470 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 LRRC63Q05C16 580 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 TUBB2AQ13885 445 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 ZNF746Q6NUN9 644 aaPredicted RBP10.84□□□□□ -0.67
PHC1-208ENST00000540574 GBP6Q6ZN66 633 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 SLFN12Q8IYM2 578 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 SPATA20Q8TB22 786 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 OSBPL9Q96SU4 736 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 TUBB2BQ9BVA1 445 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 RIC8AQ9NPQ8 531 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 ZNF277Q9NRM2 450 aaPredicted RBP10.84□□□□□ -0.67
PHC1-208ENST00000540574 BLOC1S4Q9NUP1 217 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 CCPG1Q9ULG6 757 aa10.84□□□□□ -0.67
PHC1-208ENST00000540574 TRPM3Q9HCF6 1732 aaPredicted RBP10.83□□□□□ -0.68
PHC1-208ENST00000540574 GSTTP1A0A1W2PQM5 241 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 KRIT1O00522 736 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 MED24O75448 989 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 FLOT1O75955 427 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 TNNC1P63316 161 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 CEP85LQ5SZL2 805 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 ALKBH5Q6P6C2 394 aaKnown RBP10.83□□□□□ -0.68
PHC1-208ENST00000540574 DPH6Q7L8W6 267 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 FAM186BQ8IYM0 893 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 C4orf32Q8N8J7 132 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 HDAC7Q8WUI4 952 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 HOOK2Q96ED9 719 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 PACSIN1Q9BY11 444 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 EHMT1Q9H9B1 1298 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 A0A1W2PQC6 194 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 NDUFAB1O14561 156 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 AFPP02771 609 aaKnown RBP10.83□□□□□ -0.68
PHC1-208ENST00000540574 GNGT1P63211 74 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 FAM102BQ5T8I3 360 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 MIER3Q7Z3K6 550 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 ACER1Q8TDN7 264 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 MRRFQ96E11 262 aaKnown RBP10.83□□□□□ -0.68
PHC1-208ENST00000540574 FGFBP2Q9BYJ0 223 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 PPANQ9NQ55 473 aaKnown RBP10.83□□□□□ -0.68
PHC1-208ENST00000540574 DMGDHQ9UI17 866 aaKnown RBP10.83□□□□□ -0.68
PHC1-208ENST00000540574 PRDM4Q9UKN5 801 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 ATP6V0A2Q9Y487 856 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 ZSCAN5CA6NGD5 496 aaPredicted RBP10.83□□□□□ -0.68
PHC1-208ENST00000540574 LRRIQ3A6PVS8 624 aaPredicted RBP10.83□□□□□ -0.68
PHC1-208ENST00000540574 EIF3CLB5ME19 914 aaKnown RBP10.83□□□□□ -0.68
PHC1-208ENST00000540574 CCT5P48643 541 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 CC2D2BQ6DHV5 1058 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 WDR59Q6PJI9 974 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 SP8Q8IXZ3 490 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 IFT20Q8IY31 132 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 BCAS4Q8TDM0 211 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 DYDC1Q8WWB3 177 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 EIF3CQ99613 913 aaKnown RBP10.83□□□□□ -0.68
PHC1-208ENST00000540574 REEP2Q9BRK0 252 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 ABCB11O95342 1321 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 ITIH6Q6UXX5 1313 aa10.83□□□□□ -0.68
PHC1-208ENST00000540574 LAMA4Q16363 1823 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 PVALEFA0A1B0GWK0 134 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 SPOPO43791 374 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 OPA1O60313 960 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 H2AFZP0C0S5 128 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 ARHGAP25P42331 645 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 CASP4P49662 377 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 USP14P54578 494 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 ZNF211Q13398 564 aaPredicted RBP10.82□□□□□ -0.68
PHC1-208ENST00000540574 ECM1Q16610 540 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 IFI16Q16666 785 aaKnown RBP10.82□□□□□ -0.68
PHC1-208ENST00000540574 PRAMEF18Q5VWM3 479 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 H2AFVQ71UI9 128 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 SPATA4Q8NEY3 305 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 MASTLQ96GX5 879 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 SELENOSQ9BQE4 189 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 DHX36Q9H2U1 1008 aaKnown RBP10.82□□□□□ -0.68
PHC1-208ENST00000540574 PHRF1Q9P1Y6 1649 aaKnown RBP10.82□□□□□ -0.68
PHC1-208ENST00000540574 KLRC1P26715 233 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 KCNA1Q09470 495 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms