RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 GJC2Q5T442 439 aaPredicted RBP13.39□□□□□ -0.27
CYB561A3-215ENST00000540317 SYDE2Q5VT97 1194 aa13.39□□□□□ -0.27
CYB561A3-215ENST00000540317 PRR12Q9ULL5 1215 aa13.39□□□□□ -0.27
CYB561A3-215ENST00000540317 PCDHA1Q9Y5I3 950 aa13.39□□□□□ -0.27
CYB561A3-215ENST00000540317 COL11A1P12107 1806 aaPredicted RBP13.39□□□□□ -0.27
CYB561A3-215ENST00000540317 PFASO15067 1338 aa13.38□□□□□ -0.27
CYB561A3-215ENST00000540317 SLC26A4O43511 780 aa13.38□□□□□ -0.27
CYB561A3-215ENST00000540317 SERPINC1P01008 464 aa13.38□□□□□ -0.27
CYB561A3-215ENST00000540317 COL6A1P12109 1028 aa13.38□□□□□ -0.27
CYB561A3-215ENST00000540317 ALAS1P13196 640 aa13.38□□□□□ -0.27
CYB561A3-215ENST00000540317 USP11P51784 963 aa13.38□□□□□ -0.27
CYB561A3-215ENST00000540317 AMPD3Q01432 767 aa13.38□□□□□ -0.27
CYB561A3-215ENST00000540317 CALCRLQ16602 461 aa13.38□□□□□ -0.27
CYB561A3-215ENST00000540317 CABP7Q86V35 215 aa13.38□□□□□ -0.27
CYB561A3-215ENST00000540317 CCDC47Q96A33 483 aaKnown RBP13.38□□□□□ -0.27
CYB561A3-215ENST00000540317 CALML4Q96GE6 196 aa13.38□□□□□ -0.27
CYB561A3-215ENST00000540317 ZNF830Q96NB3 372 aaPredicted RBP13.38□□□□□ -0.27
CYB561A3-215ENST00000540317 TRERF1Q96PN7 1200 aa13.38□□□□□ -0.27
CYB561A3-215ENST00000540317 MTMR9Q96QG7 549 aa13.38□□□□□ -0.27
CYB561A3-215ENST00000540317 TMEM260Q9NX78 707 aa13.38□□□□□ -0.27
CYB561A3-215ENST00000540317 IFNKQ9P0W0 207 aa13.38□□□□□ -0.27
CYB561A3-215ENST00000540317 PARP14Q460N5 1801 aa13.38□□□□□ -0.27
CYB561A3-215ENST00000540317 DNAJC25-GNG10A0A024R161 153 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 KBTBD13C9JR72 458 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 NRDCO43847 1150 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 FOSP01100 380 aaPredicted RBP13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 TAL1P17542 331 aaPredicted RBP13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 UBASH3AP57075 661 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 KCNB1Q14721 858 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 KARSQ15046 597 aaKnown RBP13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 SPATA1Q5VX52 437 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 MOXD1Q6UVY6 613 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 FBXO11Q86XK2 927 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 IGSF22Q8N9C0 903 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 KIAA1524Q8TCG1 905 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 XPO4Q9C0E2 1151 aaKnown RBP13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 HSD3B7Q9H2F3 369 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 KCNF1Q9H3M0 494 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 ACAD9Q9H845 621 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 RNF146Q9NTX7 359 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 SPTLC3Q9NUV7 552 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 NRBP1Q9UHY1 535 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 ZNF536O15090 1300 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 POTEB2H3BUK9 544 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 DNM1LO00429 736 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 RARBP10826 455 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 SYN1P17600 705 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 ATN1P54259 1190 aaPredicted RBP13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 NOLC1Q14978 699 aaKnown RBP eCLIP13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 ZNF658Q5TYW1 1059 aaPredicted RBP13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 MSL3Q8N5Y2 521 aaKnown RBP13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 CCDC150Q8NCX0 1101 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 LRRC27Q9C0I9 530 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 KBTBD4Q9NVX7 518 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 FANCLQ9NW38 375 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 STK17AQ9UEE5 414 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 CCPG1Q9ULG6 757 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 ZMYND8Q9ULU4 1186 aaPredicted RBP13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 NFE2L3Q9Y4A8 694 aa13.37□□□□□ -0.27
CYB561A3-215ENST00000540317 ZNF236Q9UL36 1845 aa13.36□□□□□ -0.27
CYB561A3-215ENST00000540317 SNAI1O95863 264 aaPredicted RBP13.36□□□□□ -0.27
CYB561A3-215ENST00000540317 RPN1P04843 607 aaKnown RBP13.36□□□□□ -0.27
CYB561A3-215ENST00000540317 CDK11BP21127 795 aaKnown RBP13.36□□□□□ -0.27
CYB561A3-215ENST00000540317 PPP1R2P41236 205 aa13.36□□□□□ -0.27
CYB561A3-215ENST00000540317 TECP42680 631 aa13.36□□□□□ -0.27
CYB561A3-215ENST00000540317 CNTN2Q02246 1040 aa13.36□□□□□ -0.27
CYB561A3-215ENST00000540317 LRRC26Q2I0M4 334 aa13.36□□□□□ -0.27
CYB561A3-215ENST00000540317 TKFCQ3LXA3 575 aa13.36□□□□□ -0.27
CYB561A3-215ENST00000540317 LRRC8AQ8IWT6 810 aa13.36□□□□□ -0.27
CYB561A3-215ENST00000540317 XPNPEP3Q9NQH7 507 aa13.36□□□□□ -0.27
CYB561A3-215ENST00000540317 ZHX1Q9UKY1 873 aaPredicted RBP13.36□□□□□ -0.27
CYB561A3-215ENST00000540317 ZNFX1Q9P2E3 1918 aaKnown RBP13.36□□□□□ -0.27
CYB561A3-215ENST00000540317 SYNGAP1Q96PV0 1343 aa13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 CYP3A7-CYP3A51PA0A087WV96 503 aa13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 SLC34A2O95436 690 aa13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 ICAM1P05362 532 aa13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 ZNF865P0CJ78 1059 aaPredicted RBP13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 AKR1A1P14550 325 aa13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 ZNF18P17022 549 aa13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 CYP3A7P24462 503 aa13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 CUL4BQ13620 913 aa13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 LRRC41Q15345 812 aa13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 UBE2SQ16763 222 aa13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 NAALADL2Q58DX5 795 aa13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 MAMDC4Q6UXC1 1216 aa13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 ZNF467Q7Z7K2 595 aaPredicted RBP13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 POTEDQ86YR6 584 aa13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 CTAGE1Q96RT6 745 aa13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 MTRQ99707 1265 aa13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 A1CFQ9NQ94 594 aaKnown RBP13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 LRWD1Q9UFC0 647 aa13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 DDX25Q9UHL0 483 aaKnown RBP13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 FAM184BQ9ULE4 1060 aa13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 STK24Q9Y6E0 443 aa13.35□□□□□ -0.27
CYB561A3-215ENST00000540317 SYNRGQ9UMZ2 1314 aa13.34□□□□□ -0.27
CYB561A3-215ENST00000540317 PPP1R3GB7ZBB8 358 aa13.34□□□□□ -0.27
CYB561A3-215ENST00000540317 PGK1P00558 417 aa13.34□□□□□ -0.27
CYB561A3-215ENST00000540317 CDC25AP30304 524 aa13.34□□□□□ -0.27
CYB561A3-215ENST00000540317 ADCYAP1R1P41586 468 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms