RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 SLC37A4O43826 429 aa7.92□□□□□ -1.14
LPCAT3-209ENST00000540060 SORBS3O60504 671 aa7.92□□□□□ -1.14
LPCAT3-209ENST00000540060 GCFC2P16383 781 aaKnown RBP7.92□□□□□ -1.14
LPCAT3-209ENST00000540060 U2AF2P26368 475 aaKnown RBP eCLIP7.92□□□□□ -1.14
LPCAT3-209ENST00000540060 SNX17Q15036 470 aa7.92□□□□□ -1.14
LPCAT3-209ENST00000540060 LETM2Q2VYF4 491 aa7.92□□□□□ -1.14
LPCAT3-209ENST00000540060 Q4G0T1 1027 aa7.92□□□□□ -1.14
LPCAT3-209ENST00000540060 PRR16Q569H4 304 aa7.92□□□□□ -1.14
LPCAT3-209ENST00000540060 PPP4R3AQ6IN85 833 aa7.92□□□□□ -1.14
LPCAT3-209ENST00000540060 CXCL17Q6UXB2 119 aa7.92□□□□□ -1.14
LPCAT3-209ENST00000540060 CYFIP1Q7L576 1253 aa7.92□□□□□ -1.14
LPCAT3-209ENST00000540060 NOSTRINQ8IVI9 506 aa7.92□□□□□ -1.14
LPCAT3-209ENST00000540060 GIMAP8Q8ND71 665 aaPredicted RBP7.92□□□□□ -1.14
LPCAT3-209ENST00000540060 AFG1LQ8WV93 481 aa7.92□□□□□ -1.14
LPCAT3-209ENST00000540060 SPATA33Q96N06 139 aa7.92□□□□□ -1.14
LPCAT3-209ENST00000540060 POLR3EQ9NVU0 708 aa7.92□□□□□ -1.14
LPCAT3-209ENST00000540060 TELO2Q9Y4R8 837 aa7.92□□□□□ -1.14
LPCAT3-209ENST00000540060 LOXHD1Q8IVV2 1947 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 RANBP2P49792 3224 aaKnown RBP7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 TRIP12Q14669 1992 aaPredicted RBP7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 H3BQV1 296 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 MSH4O15457 936 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 DHX15O43143 795 aaKnown RBP7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 ZEB2O60315 1214 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 CCNT1O60563 726 aaKnown RBP7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 CABYRO75952 493 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 F2P00734 622 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 MYL3P08590 195 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 ZNF286BP0CG31 522 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 GNL2Q13823 731 aaKnown RBP7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 DGKDQ16760 1214 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 BRDTQ58F21 947 aaPredicted RBP7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 C1orf53Q5VUE5 145 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 LARP1BQ659C4 914 aaKnown RBP7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 PDCD7Q8N8D1 485 aaKnown RBP7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 ETNPPLQ8TBG4 499 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 SLC5A5Q92911 643 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 FERMT2Q96AC1 680 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 GLT1D1Q96MS3 346 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 GPR20Q99678 358 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 NAP1L4Q99733 375 aaKnown RBP7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 SDF4Q9BRK5 362 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 ZNF577Q9BSK1 485 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 SENP6Q9GZR1 1112 aaPredicted RBP7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 MLXIPQ9HAP2 919 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 JPH1Q9HDC5 661 aaPredicted RBP7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 KCNMB3Q9NPA1 279 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 STARD7Q9NQZ5 370 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 SLC9A2Q9UBY0 812 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 DDX25Q9UHL0 483 aaKnown RBP7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 ELP1O95163 1332 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 KAT6AQ92794 2004 aa7.91□□□□□ -1.14
LPCAT3-209ENST00000540060 PDE4DIPQ5VU43 2346 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 GRIN2DO15399 1336 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 EMSYQ7Z589 1322 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 A0A0U1RQG5 324 aaPredicted RBP7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 VPS37CA5D8V6 355 aaPredicted RBP7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 NOP56O00567 594 aaKnown RBP7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 KPNA6O60684 536 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 PPFIA4O75335 1185 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 CCNE2O96020 404 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 LGALS2P05162 132 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 PDCP20941 246 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 SYT1P21579 422 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 TCF7P36402 384 aaPredicted RBP7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 TRAPPC10P48553 1259 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 PSMC6P62333 389 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 SP4Q02446 784 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 LRRC26Q2I0M4 334 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 SLC39A5Q6ZMH5 540 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 SLC43A3Q8NBI5 491 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 KAT2BQ92831 832 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 GJA10Q969M2 543 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 UIMC1Q96RL1 719 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 RIT2Q99578 217 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 C16orf70Q9BSU1 422 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 MTG1Q9BT17 334 aaPredicted RBP7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 HTATIP2Q9BUP3 242 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 TBC1D22BQ9NU19 505 aa7.9□□□□□ -1.14
LPCAT3-209ENST00000540060 IGSF9BQ9UPX0 1349 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 GSTTP1A0A1W2PQM5 241 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 DDX39AO00148 427 aaKnown RBP7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 HAS3O00219 553 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 TBX3O15119 743 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 NEMFO60524 1076 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 PSMD10O75832 226 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 ATG7O95352 703 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 HSP90AA1P07900 732 aaKnown RBP7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 CDK7P50613 346 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 TOB1P50616 345 aaPredicted RBP7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 RTP1P59025 263 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 ACTR2P61160 394 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 LSM11P83369 360 aaKnown RBP eCLIP7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 KRT76Q01546 638 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 ORC2Q13416 577 aaPredicted RBP7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 NBR1Q14596 966 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 TRIM60Q495X7 471 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 TTC38Q5R3I4 469 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 LRCH2Q5VUJ6 765 aa7.89□□□□□ -1.15
LPCAT3-209ENST00000540060 MCTP1Q6DN14 999 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms