RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 CLK2P49760 499 aaKnown RBP10.62□□□□□ -0.71
CDH13-204ENST00000539548 GTF2A1P52655 376 aaPredicted RBP10.62□□□□□ -0.71
CDH13-204ENST00000539548 KLHL30Q0D2K2 578 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 RAPGEF1Q13905 1077 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 ASIC2Q16515 512 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 UPF1Q92900 1129 aaKnown RBP eCLIP10.62□□□□□ -0.71
CDH13-204ENST00000539548 PBKQ96KB5 322 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 ATP6V1G3Q96LB4 118 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 RNPC3Q96LT9 517 aaKnown RBP10.62□□□□□ -0.71
CDH13-204ENST00000539548 GANQ9H2C0 597 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 KCTD10Q9H3F6 313 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 RABEP2Q9H5N1 569 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 MTMR4Q9NYA4 1195 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 DDX25Q9UHL0 483 aaKnown RBP10.62□□□□□ -0.71
CDH13-204ENST00000539548 SAMM50Q9Y512 469 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 KDM3AQ9Y4C1 1321 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 PLIN4Q96Q06 1357 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 AHDC1Q5TGY3 1603 aaPredicted RBP10.62□□□□□ -0.71
CDH13-204ENST00000539548 KIF13BQ9NQT8 1826 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 GCFC2P16383 781 aaKnown RBP10.62□□□□□ -0.71
CDH13-204ENST00000539548 LSP1P33241 339 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 TNNI2P48788 182 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 ATP1A2P50993 1020 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 GUCY2FP51841 1108 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 KCNQ4P56696 695 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 RHBDL3P58872 404 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 GRAPQ13588 217 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 RPS6KA1Q15418 735 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 EDRF1Q3B7T1 1238 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 LRIG3Q6UXM1 1119 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 GRAPLQ8TC17 118 aaPredicted RBP10.62□□□□□ -0.71
CDH13-204ENST00000539548 SCFD2Q8WU76 684 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 TAF4BQ92750 862 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.62□□□□□ -0.71
CDH13-204ENST00000539548 ISCUQ9H1K1 167 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 TAF1DQ9H5J8 278 aaPredicted RBP10.62□□□□□ -0.71
CDH13-204ENST00000539548 PLCB1Q9NQ66 1216 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 ADAMTS1Q9UHI8 967 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 PCDHA12Q9UN75 941 aa10.62□□□□□ -0.71
CDH13-204ENST00000539548 FRMPD2Q68DX3 1309 aaPredicted RBP10.62□□□□□ -0.71
CDH13-204ENST00000539548 FOCADQ5VW36 1801 aa10.61□□□□□ -0.71
CDH13-204ENST00000539548 BHMG1C9JSJ3 638 aaPredicted RBP10.61□□□□□ -0.71
CDH13-204ENST00000539548 RAD51CO43502 376 aa10.61□□□□□ -0.71
CDH13-204ENST00000539548 NR1D1P20393 614 aa10.61□□□□□ -0.71
CDH13-204ENST00000539548 DPY19L2P1Q6NXN4 242 aa10.61□□□□□ -0.71
CDH13-204ENST00000539548 PPP4R3CPQ6ZMV5 832 aa10.61□□□□□ -0.71
CDH13-204ENST00000539548 IRF2BP2Q7Z5L9 587 aa10.61□□□□□ -0.71
CDH13-204ENST00000539548 SCFD1Q8WVM8 642 aa10.61□□□□□ -0.71
CDH13-204ENST00000539548 KAT2BQ92831 832 aa10.61□□□□□ -0.71
CDH13-204ENST00000539548 NAP1L4Q99733 375 aaKnown RBP10.61□□□□□ -0.71
CDH13-204ENST00000539548 PACSIN1Q9BY11 444 aa10.61□□□□□ -0.71
CDH13-204ENST00000539548 FGFBP2Q9BYJ0 223 aa10.61□□□□□ -0.71
CDH13-204ENST00000539548 JMJD4Q9H9V9 463 aa10.61□□□□□ -0.71
CDH13-204ENST00000539548 EMILIN3Q9NT22 766 aa10.61□□□□□ -0.71
CDH13-204ENST00000539548 GGA2Q9UJY4 613 aa10.61□□□□□ -0.71
CDH13-204ENST00000539548 BZW2Q9Y6E2 419 aaKnown RBP10.61□□□□□ -0.71
CDH13-204ENST00000539548 ARFGEF1Q9Y6D6 1849 aa10.61□□□□□ -0.71
CDH13-204ENST00000539548 IGKV6D-41A0A0C4DH26 115 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 CETN3O15182 167 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 MEFVO15553 781 aaPredicted RBP10.6□□□□□ -0.71
CDH13-204ENST00000539548 MARCH6O60337 910 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 PPP1R37O75864 691 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 KIF4AO95239 1232 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 PLA2G4BP0C869 781 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 MDH1P40925 334 aaKnown RBP10.6□□□□□ -0.71
CDH13-204ENST00000539548 USP11P51784 963 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 MRPL12P52815 198 aaKnown RBP10.6□□□□□ -0.71
CDH13-204ENST00000539548 KCNH2Q12809 1159 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 ADAM9Q13443 819 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 CUL1Q13616 776 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 TRADDQ15628 312 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 PTGISQ16647 500 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 IFI16Q16666 785 aaKnown RBP10.6□□□□□ -0.71
CDH13-204ENST00000539548 MICALCLQ6ZW33 695 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 YTHDF3Q7Z739 585 aaKnown RBP10.6□□□□□ -0.71
CDH13-204ENST00000539548 SLF2Q8IX21 1173 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 FAM133AQ8N9E0 248 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 ACTRT1Q8TDG2 376 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 CUL5Q93034 780 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 TMBIM4Q9HC24 238 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 TBC1D7Q9P0N9 293 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 PACSIN2Q9UNF0 486 aaPredicted RBP10.6□□□□□ -0.71
CDH13-204ENST00000539548 PLAAQ9Y263 795 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 GAKO14976 1311 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 FRMD3A2A2Y4 597 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 E9PMD0 336 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 KIAA0754O94854 1291 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 FSBPO95073 299 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 SSBP05455 408 aaKnown RBP eCLIP10.6□□□□□ -0.71
CDH13-204ENST00000539548 IL1R1P14778 569 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 DNA2P51530 1060 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 GUCY1A3Q02108 690 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 ARID5AQ03989 594 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 ITGB3BPQ13352 177 aaPredicted RBP10.6□□□□□ -0.71
CDH13-204ENST00000539548 NFIXQ14938 502 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 UBE2SQ16763 222 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 HERC4Q5GLZ8 1057 aaPredicted RBP10.6□□□□□ -0.71
CDH13-204ENST00000539548 SWT1Q5T5J6 900 aaKnown RBP10.6□□□□□ -0.71
CDH13-204ENST00000539548 NELFCDQ8IXH7 590 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 ADGRF4Q8IZF3 695 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms