RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 PFKFB3Q16875 520 aaPredicted RBP21.8■■□□□ 1.08
TNFRSF1A-212ENST00000539372 PPM1EQ8WY54 764 aa21.8■■□□□ 1.08
TNFRSF1A-212ENST00000539372 SEPT1Q8WYJ6 367 aa21.8■■□□□ 1.08
TNFRSF1A-212ENST00000539372 KCNH7Q9NS40 1196 aa21.8■■□□□ 1.08
TNFRSF1A-212ENST00000539372 CHD9Q3L8U1 2897 aa21.79■■□□□ 1.08
TNFRSF1A-212ENST00000539372 FOSP01100 380 aaPredicted RBP21.79■■□□□ 1.08
TNFRSF1A-212ENST00000539372 GNAT1P11488 350 aa21.79■■□□□ 1.08
TNFRSF1A-212ENST00000539372 SCG2P13521 617 aa21.79■■□□□ 1.08
TNFRSF1A-212ENST00000539372 IGFBP4P22692 258 aa21.79■■□□□ 1.08
TNFRSF1A-212ENST00000539372 MARK3P27448 753 aa21.79■■□□□ 1.08
TNFRSF1A-212ENST00000539372 DEFB103AP81534 67 aa21.79■■□□□ 1.08
TNFRSF1A-212ENST00000539372 LMBR1Q8WVP7 490 aa21.79■■□□□ 1.08
TNFRSF1A-212ENST00000539372 A0A0C4DFX4 3053 aa21.78■■□□□ 1.08
TNFRSF1A-212ENST00000539372 NID2Q14112 1375 aa21.78■■□□□ 1.08
TNFRSF1A-212ENST00000539372 KIF28PB7ZC32 967 aa21.78■■□□□ 1.08
TNFRSF1A-212ENST00000539372 MAFGO15525 162 aa21.78■■□□□ 1.08
TNFRSF1A-212ENST00000539372 LGR5O75473 907 aa21.78■■□□□ 1.08
TNFRSF1A-212ENST00000539372 CTSHP09668 335 aa21.78■■□□□ 1.08
TNFRSF1A-212ENST00000539372 ARP10275 920 aa21.78■■□□□ 1.08
TNFRSF1A-212ENST00000539372 CLK2P49760 499 aaKnown RBP21.78■■□□□ 1.08
TNFRSF1A-212ENST00000539372 AP3B2Q13367 1082 aa21.78■■□□□ 1.08
TNFRSF1A-212ENST00000539372 JAKMIP3Q5VZ66 844 aa21.78■■□□□ 1.08
TNFRSF1A-212ENST00000539372 FBXL16Q8N461 479 aa21.78■■□□□ 1.08
TNFRSF1A-212ENST00000539372 GLG1Q92896 1179 aa21.78■■□□□ 1.08
TNFRSF1A-212ENST00000539372 PHKBQ93100 1093 aa21.78■■□□□ 1.08
TNFRSF1A-212ENST00000539372 AGXT2Q9BYV1 514 aa21.78■■□□□ 1.08
TNFRSF1A-212ENST00000539372 GLT8D2Q9H1C3 349 aa21.78■■□□□ 1.08
TNFRSF1A-212ENST00000539372 CERS4Q9HA82 394 aa21.78■■□□□ 1.08
TNFRSF1A-212ENST00000539372 JPH1Q9HDC5 661 aaPredicted RBP21.78■■□□□ 1.08
TNFRSF1A-212ENST00000539372 ABHD14A-ACY1A0A1B0GW23 586 aa21.77■■□□□ 1.08
TNFRSF1A-212ENST00000539372 ADAMTS3O15072 1205 aa21.77■■□□□ 1.08
TNFRSF1A-212ENST00000539372 TLL1O43897 1013 aa21.77■■□□□ 1.08
TNFRSF1A-212ENST00000539372 ARHGEF15O94989 841 aa21.77■■□□□ 1.08
TNFRSF1A-212ENST00000539372 SREBF1P36956 1147 aa21.77■■□□□ 1.08
TNFRSF1A-212ENST00000539372 CCT2P78371 535 aaKnown RBP21.77■■□□□ 1.08
TNFRSF1A-212ENST00000539372 IKBKEQ14164 716 aa21.77■■□□□ 1.08
TNFRSF1A-212ENST00000539372 PKN1Q16512 942 aa21.77■■□□□ 1.08
TNFRSF1A-212ENST00000539372 CEP55Q53EZ4 464 aa21.77■■□□□ 1.08
TNFRSF1A-212ENST00000539372 TEX2Q8IWB9 1127 aa21.77■■□□□ 1.08
TNFRSF1A-212ENST00000539372 SLC9A2Q9UBY0 812 aa21.77■■□□□ 1.08
TNFRSF1A-212ENST00000539372 EMSYQ7Z589 1322 aa21.77■■□□□ 1.07
TNFRSF1A-212ENST00000539372 PRPF3O43395 683 aaKnown RBP21.76■■□□□ 1.07
TNFRSF1A-212ENST00000539372 ZNF76P36508 570 aa21.76■■□□□ 1.07
TNFRSF1A-212ENST00000539372 ADAM17P78536 824 aa21.76■■□□□ 1.07
TNFRSF1A-212ENST00000539372 PPFIA1Q13136 1202 aa21.76■■□□□ 1.07
TNFRSF1A-212ENST00000539372 CCDC85BQ15834 202 aaPredicted RBP21.76■■□□□ 1.07
TNFRSF1A-212ENST00000539372 RUFY3Q7L099 469 aa21.76■■□□□ 1.07
TNFRSF1A-212ENST00000539372 DBF4BQ8NFT6 615 aa21.76■■□□□ 1.07
TNFRSF1A-212ENST00000539372 PRUNE2Q8WUY3 3088 aa21.76■■□□□ 1.07
TNFRSF1A-212ENST00000539372 SDF4Q9BRK5 362 aa21.76■■□□□ 1.07
TNFRSF1A-212ENST00000539372 ZBED2Q9BTP6 218 aa21.76■■□□□ 1.07
TNFRSF1A-212ENST00000539372 OSBPL7Q9BZF2 842 aa21.76■■□□□ 1.07
TNFRSF1A-212ENST00000539372 NCOA5Q9HCD5 579 aaKnown RBP21.76■■□□□ 1.07
TNFRSF1A-212ENST00000539372 AGO4Q9HCK5 861 aaKnown RBP21.76■■□□□ 1.07
TNFRSF1A-212ENST00000539372 ERAP1Q9NZ08 941 aa21.76■■□□□ 1.07
TNFRSF1A-212ENST00000539372 NRCAMQ92823 1304 aa21.76■■□□□ 1.07
TNFRSF1A-212ENST00000539372 MYO9BQ13459 2157 aa21.75■■□□□ 1.07
TNFRSF1A-212ENST00000539372 RFXAPO00287 272 aa21.75■■□□□ 1.07
TNFRSF1A-212ENST00000539372 PDIA3P30101 505 aaKnown RBP21.75■■□□□ 1.07
TNFRSF1A-212ENST00000539372 AKAP17AQ02040 695 aaKnown RBP21.75■■□□□ 1.07
TNFRSF1A-212ENST00000539372 ITGB3BPQ13352 177 aaPredicted RBP21.75■■□□□ 1.07
TNFRSF1A-212ENST00000539372 RUFY4Q6ZNE9 571 aa21.75■■□□□ 1.07
TNFRSF1A-212ENST00000539372 PCYT2Q99447 389 aa21.75■■□□□ 1.07
TNFRSF1A-212ENST00000539372 LARP6Q9BRS8 491 aaKnown RBP21.75■■□□□ 1.07
TNFRSF1A-212ENST00000539372 SLC26A6Q9BXS9 759 aa21.75■■□□□ 1.07
TNFRSF1A-212ENST00000539372 SMARCAD1Q9H4L7 1026 aa21.75■■□□□ 1.07
TNFRSF1A-212ENST00000539372 ZSWIM6Q9HCJ5 1215 aa21.75■■□□□ 1.07
TNFRSF1A-212ENST00000539372 PPP4R2Q9NY27 417 aa21.75■■□□□ 1.07
TNFRSF1A-212ENST00000539372 PTPRSQ13332 1948 aa21.74■■□□□ 1.07
TNFRSF1A-212ENST00000539372 LCHNA4D1U4 455 aa21.74■■□□□ 1.07
TNFRSF1A-212ENST00000539372 EPOPA6NHQ4 379 aa21.74■■□□□ 1.07
TNFRSF1A-212ENST00000539372 EPB41L2O43491 1005 aaKnown RBP21.74■■□□□ 1.07
TNFRSF1A-212ENST00000539372 CAND2O75155 1236 aa21.74■■□□□ 1.07
TNFRSF1A-212ENST00000539372 TAP1Q03518 808 aa21.74■■□□□ 1.07
TNFRSF1A-212ENST00000539372 TOB2Q14106 344 aaPredicted RBP21.74■■□□□ 1.07
TNFRSF1A-212ENST00000539372 GRIK4Q16099 956 aa21.74■■□□□ 1.07
TNFRSF1A-212ENST00000539372 NTRK3Q16288 839 aa21.74■■□□□ 1.07
TNFRSF1A-212ENST00000539372 FAM117BQ6P1L5 589 aa21.74■■□□□ 1.07
TNFRSF1A-212ENST00000539372 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.74■■□□□ 1.07
TNFRSF1A-212ENST00000539372 ARNTL2Q8WYA1 636 aa21.74■■□□□ 1.07
TNFRSF1A-212ENST00000539372 UIMC1Q96RL1 719 aa21.74■■□□□ 1.07
TNFRSF1A-212ENST00000539372 ZMYND12Q9H0C1 365 aa21.74■■□□□ 1.07
TNFRSF1A-212ENST00000539372 C6orf50Q9HD87 102 aa21.74■■□□□ 1.07
TNFRSF1A-212ENST00000539372 PRDM6Q9NQX0 595 aa21.74■■□□□ 1.07
TNFRSF1A-212ENST00000539372 CYP46A1Q9Y6A2 500 aa21.74■■□□□ 1.07
TNFRSF1A-212ENST00000539372 NFASCO94856 1347 aa21.74■■□□□ 1.07
TNFRSF1A-212ENST00000539372 CHD7Q9P2D1 2997 aa21.74■■□□□ 1.07
TNFRSF1A-212ENST00000539372 ESYT2A0FGR8 921 aa21.73■■□□□ 1.07
TNFRSF1A-212ENST00000539372 DDX39AO00148 427 aaKnown RBP21.73■■□□□ 1.07
TNFRSF1A-212ENST00000539372 MEIS1O00470 390 aa21.73■■□□□ 1.07
TNFRSF1A-212ENST00000539372 EFCAB14O75071 495 aa21.73■■□□□ 1.07
TNFRSF1A-212ENST00000539372 ACTR2P61160 394 aa21.73■■□□□ 1.07
TNFRSF1A-212ENST00000539372 IGBP1P78318 339 aa21.73■■□□□ 1.07
TNFRSF1A-212ENST00000539372 PLEKHG4Q58EX7 1191 aa21.73■■□□□ 1.07
TNFRSF1A-212ENST00000539372 SPRED2Q7Z698 418 aa21.73■■□□□ 1.07
TNFRSF1A-212ENST00000539372 MICALL1Q8N3F8 863 aa21.73■■□□□ 1.07
TNFRSF1A-212ENST00000539372 CCDC12Q8WUD4 166 aaPredicted RBP21.73■■□□□ 1.07
TNFRSF1A-212ENST00000539372 COL25A1Q9BXS0 654 aaPredicted RBP21.73■■□□□ 1.07
TNFRSF1A-212ENST00000539372 UPF3BQ9BZI7 483 aaKnown RBP21.73■■□□□ 1.07
TNFRSF1A-212ENST00000539372 AZI2Q9H6S1 392 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms