RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 AKAP10O43572 662 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 ADAM23O75077 832 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 TADA3O75528 432 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 SCGB1D2O95969 90 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 MYBL2P10244 700 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 THBS2P35442 1172 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 GDNFP39905 211 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 SMAD3P84022 425 aaKnown RBP4.25□□□□□ -1.73
SNHG1-210ENST00000539303 TUSC3Q13454 348 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 NR0B2Q15466 257 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 TERF2Q15554 542 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 SMAD2Q15796 467 aaKnown RBP4.25□□□□□ -1.73
SNHG1-210ENST00000539303 INAVAQ3KP66 663 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 FIGNQ5HY92 759 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 CATSPEREQ5SY80 951 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 FYB2Q5VWT5 728 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 NOL8Q76FK4 1167 aaKnown RBP4.25□□□□□ -1.73
SNHG1-210ENST00000539303 C11orf74Q86VG3 221 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 SPPL2CQ8IUH8 684 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 DLG3Q92796 817 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 HOOK2Q96ED9 719 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 RTFDC1Q9BY42 306 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-210ENST00000539303 SEMA4AQ9H3S1 761 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 PCIF1Q9H4Z3 704 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 ZMAT4Q9H898 229 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 RC3H2Q9HBD1 1191 aaKnown RBP4.25□□□□□ -1.73
SNHG1-210ENST00000539303 RIC8BQ9NVN3 520 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 MYOTQ9UBF9 498 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 ASH2LQ9UBL3 628 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 SPO11Q9Y5K1 396 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 ATP23Q9Y6H3 246 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-210ENST00000539303 A0A1W2PQJ5 194 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 TCRBV5S2A0A599 114 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 NUDT19A8MXV4 375 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 KRIT1O00522 736 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 HGSO14964 777 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-210ENST00000539303 PRPF3O43395 683 aaKnown RBP4.24□□□□□ -1.73
SNHG1-210ENST00000539303 BUB1BO60566 1050 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-210ENST00000539303 CLASP2O75122 1294 aaKnown RBP4.24□□□□□ -1.73
SNHG1-210ENST00000539303 HIP1RO75146 1068 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 H2AFYO75367 372 aaKnown RBP4.24□□□□□ -1.73
SNHG1-210ENST00000539303 ULK1O75385 1050 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 C4BPAP04003 597 aaKnown RBP4.24□□□□□ -1.73
SNHG1-210ENST00000539303 MMEP08473 750 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 PTPN1P18031 435 aaKnown RBP4.24□□□□□ -1.73
SNHG1-210ENST00000539303 SLC6A11P48066 632 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 SCAND1P57086 179 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 PDCD1Q15116 288 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 PCBP2Q15366 365 aaKnown RBP eCLIP4.24□□□□□ -1.73
SNHG1-210ENST00000539303 ZNF174Q15697 407 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 NFE2Q16621 373 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-210ENST00000539303 PTPN21Q16825 1174 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 BTBD8Q5XKL5 378 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 MILR1Q7Z6M3 343 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-210ENST00000539303 PANK1Q8TE04 598 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 TGFBRAP1Q8WUH2 860 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 MYLIPQ8WY64 445 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 RTF1Q92541 710 aaKnown RBP4.24□□□□□ -1.73
SNHG1-210ENST00000539303 AHCYL2Q96HN2 611 aaKnown RBP4.24□□□□□ -1.73
SNHG1-210ENST00000539303 AASDHPPTQ9NRN7 309 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 PCMTD2Q9NV79 361 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 ZIM2Q9NZV7 527 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 RBPJLQ9UBG7 517 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 PCDHB4Q9Y5E5 795 aa4.24□□□□□ -1.73
SNHG1-210ENST00000539303 PRAMEF25A6NGN4 478 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 F8W031 263 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-210ENST00000539303 K7ESF4 209 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 TSPAN6O43657 245 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 FBXO21O94952 628 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 PNLIPP16233 465 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 EPHA5P54756 1037 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 EPHB1P54762 984 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 SESN3P58005 492 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 OCRLQ01968 901 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 RPTNQ6XPR3 784 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 EP400NLQ6ZTU2 488 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 ZBTB46Q86UZ6 589 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 CABP7Q86V35 215 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 DCP2Q8IU60 420 aaKnown RBP4.23□□□□□ -1.73
SNHG1-210ENST00000539303 WDR75Q8IWA0 830 aaKnown RBP4.23□□□□□ -1.73
SNHG1-210ENST00000539303 ABI1Q8IZP0 508 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 NETO2Q8NC67 525 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 SEC14L1Q92503 715 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 ERCC4Q92889 916 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-210ENST00000539303 FUBP3Q96I24 572 aaKnown RBP eCLIP4.23□□□□□ -1.73
SNHG1-210ENST00000539303 SYT3Q9BQG1 590 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 SMOC1Q9H4F8 434 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 KCNH7Q9NS40 1196 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 NOB1Q9ULX3 412 aaKnown RBP4.23□□□□□ -1.73
SNHG1-210ENST00000539303 ZNF652Q9Y2D9 606 aa4.23□□□□□ -1.73
SNHG1-210ENST00000539303 SRGAP3O43295 1099 aa4.22□□□□□ -1.73
SNHG1-210ENST00000539303 HYAL3O43820 417 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-210ENST00000539303 PCDHGA12O60330 932 aa4.22□□□□□ -1.73
SNHG1-210ENST00000539303 KDM1AO60341 852 aa4.22□□□□□ -1.73
SNHG1-210ENST00000539303 WNT11O96014 354 aa4.22□□□□□ -1.73
SNHG1-210ENST00000539303 CLEC2LP0C7M8 214 aa4.22□□□□□ -1.73
SNHG1-210ENST00000539303 MC4RP32245 332 aa4.22□□□□□ -1.73
SNHG1-210ENST00000539303 ERVFRD-1P60508 538 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms