RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 KLHDC7AQ5VTJ3 777 aa13.52□□□□□ -0.25
USP3-203ENST00000538686 RRAGBQ5VZM2 374 aa13.52□□□□□ -0.25
USP3-203ENST00000538686 RNF43Q68DV7 783 aa13.52□□□□□ -0.25
USP3-203ENST00000538686 TMC3Q7Z5M5 1100 aa13.52□□□□□ -0.25
USP3-203ENST00000538686 NME8Q8N427 588 aa13.52□□□□□ -0.25
USP3-203ENST00000538686 TBC1D16Q8TBP0 767 aa13.52□□□□□ -0.25
USP3-203ENST00000538686 NELFBQ8WX92 580 aa13.52□□□□□ -0.25
USP3-203ENST00000538686 HAUS7Q99871 368 aa13.52□□□□□ -0.25
USP3-203ENST00000538686 PHAXQ9H814 394 aaKnown RBP13.52□□□□□ -0.25
USP3-203ENST00000538686 MLXIPQ9HAP2 919 aa13.52□□□□□ -0.25
USP3-203ENST00000538686 TBCCD1Q9NVR7 557 aa13.52□□□□□ -0.25
USP3-203ENST00000538686 CEP126Q9P2H0 1117 aa13.52□□□□□ -0.25
USP3-203ENST00000538686 PARP4Q9UKK3 1724 aaKnown RBP13.52□□□□□ -0.25
USP3-203ENST00000538686 ITGA2BP08514 1039 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 MTHFSDQ2M296 383 aaKnown RBP13.51□□□□□ -0.25
USP3-203ENST00000538686 SLC44A4Q53GD3 710 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 UCMAQ8WVF2 138 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 SPIRE2Q8WWL2 714 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 FERMT2Q96AC1 680 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 HAUS1Q96CS2 278 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 ETNK1Q9HBU6 452 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 EXOC1Q9NV70 894 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 NMRK1Q9NWW6 199 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 EHD2Q9NZN4 543 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 NDUFA13Q9P0J0 144 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 TMEM59LQ9UK28 342 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 PNMA2Q9UL42 364 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 STK36Q9NRP7 1315 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 CASZ1Q86V15 1759 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 DCDC2CA8MYV0 355 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 HNRNPRO43390 633 aaKnown RBP13.51□□□□□ -0.25
USP3-203ENST00000538686 ATP9AO75110 1047 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 NUDT17P0C025 328 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 ALOX15P16050 662 aaPredicted RBP13.51□□□□□ -0.25
USP3-203ENST00000538686 MLH1P40692 756 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 TBC1D9BQ66K14 1250 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 OLFML1Q6UWY5 402 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 TAOK1Q7L7X3 1001 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 COL23A1Q86Y22 540 aaPredicted RBP13.51□□□□□ -0.25
USP3-203ENST00000538686 USP38Q8NB14 1042 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 PPFIBP2Q8ND30 876 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 LRRC8CQ8TDW0 803 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 PSMB7Q99436 277 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 TCHPQ9BT92 498 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 PUS3Q9BZE2 481 aaKnown RBP13.51□□□□□ -0.25
USP3-203ENST00000538686 STRN4Q9NRL3 753 aa13.51□□□□□ -0.25
USP3-203ENST00000538686 CPDO75976 1380 aa13.5□□□□□ -0.25
USP3-203ENST00000538686 PI4KAP2A4QPH2 592 aa13.5□□□□□ -0.25
USP3-203ENST00000538686 SIGLEC16A6NMB1 481 aa13.5□□□□□ -0.25
USP3-203ENST00000538686 WNT7AO00755 349 aa13.5□□□□□ -0.25
USP3-203ENST00000538686 ATP9BO43861 1147 aa13.5□□□□□ -0.25
USP3-203ENST00000538686 GFPT2O94808 682 aa13.5□□□□□ -0.25
USP3-203ENST00000538686 POTEJP0CG39 1038 aa13.5□□□□□ -0.25
USP3-203ENST00000538686 HSPD1P10809 573 aaKnown RBP13.5□□□□□ -0.25
USP3-203ENST00000538686 IARSP41252 1262 aaKnown RBP13.5□□□□□ -0.25
USP3-203ENST00000538686 ACVR2BQ13705 512 aa13.5□□□□□ -0.25
USP3-203ENST00000538686 LIN52Q52LA3 116 aa13.5□□□□□ -0.25
USP3-203ENST00000538686 EPHA10Q5JZY3 1008 aa13.5□□□□□ -0.25
USP3-203ENST00000538686 DAB2IPQ5VWQ8 1189 aa13.5□□□□□ -0.25
USP3-203ENST00000538686 MYOCDQ8IZQ8 938 aa13.5□□□□□ -0.25
USP3-203ENST00000538686 PI4KAP1Q8N8J0 262 aa13.5□□□□□ -0.25
USP3-203ENST00000538686 GRAMD1AQ96CP6 724 aa13.5□□□□□ -0.25
USP3-203ENST00000538686 MS4A14Q96JA4 679 aa13.5□□□□□ -0.25
USP3-203ENST00000538686 INPP4AQ96PE3 977 aaPredicted RBP13.5□□□□□ -0.25
USP3-203ENST00000538686 PRMT1Q99873 361 aaKnown RBP13.5□□□□□ -0.25
USP3-203ENST00000538686 DBF4Q9UBU7 674 aaPredicted RBP13.5□□□□□ -0.25
USP3-203ENST00000538686 USP20Q9Y2K6 914 aa13.5□□□□□ -0.25
USP3-203ENST00000538686 THRAP3Q9Y2W1 955 aaKnown RBP13.5□□□□□ -0.25
USP3-203ENST00000538686 ZNF263O14978 683 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 GNA14O95837 355 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 BMP15O95972 392 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 AFMP43652 599 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 SERPINB8P50452 374 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 KIF11P52732 1056 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 ADCY1Q08828 1119 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 CCDC6Q16204 474 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 CLPPQ16740 277 aaPredicted RBP13.49□□□□□ -0.25
USP3-203ENST00000538686 ZNF658Q5TYW1 1059 aaPredicted RBP13.49□□□□□ -0.25
USP3-203ENST00000538686 UNC13DQ70J99 1090 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 CHST3Q7LGC8 479 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 DDX23Q9BUQ8 820 aaKnown RBP13.49□□□□□ -0.25
USP3-203ENST00000538686 BHMT2Q9H2M3 363 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 FOXP1Q9H334 677 aaPredicted RBP13.49□□□□□ -0.25
USP3-203ENST00000538686 AIPL1Q9NZN9 384 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 KLHL14Q9P2G3 628 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.49□□□□□ -0.25
USP3-203ENST00000538686 CCDC188H7C350 402 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 NAT1P18440 290 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 HPCAP84074 193 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 C6orf118Q5T5N4 469 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 CCNJLQ8IV13 435 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 SMYD4Q8IYR2 804 aaPredicted RBP13.49□□□□□ -0.25
USP3-203ENST00000538686 NCOA7Q8NI08 942 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 KCNN1Q92952 543 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 DHTKD1Q96HY7 919 aaPredicted RBP13.49□□□□□ -0.25
USP3-203ENST00000538686 DPH5Q9H2P9 285 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 ADAM7Q9H2U9 754 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 PLAGL2Q9UPG8 496 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 CHMP2BQ9UQN3 213 aa13.49□□□□□ -0.25
USP3-203ENST00000538686 SOS2Q07890 1332 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms