RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 MIS18BP1Q6P0N0 1132 aa11.95□□□□□ -0.5
TNFRSF1A-211ENST00000538363 USP49Q70CQ1 688 aa11.95□□□□□ -0.5
TNFRSF1A-211ENST00000538363 CYFIP1Q7L576 1253 aa11.95□□□□□ -0.5
TNFRSF1A-211ENST00000538363 CKAP2LQ8IYA6 745 aa11.95□□□□□ -0.5
TNFRSF1A-211ENST00000538363 TRMT44Q8IYL2 757 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-211ENST00000538363 MSL3Q8N5Y2 521 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-211ENST00000538363 NPLOC4Q8TAT6 608 aa11.95□□□□□ -0.5
TNFRSF1A-211ENST00000538363 CD99L2Q8TCZ2 262 aa11.95□□□□□ -0.5
TNFRSF1A-211ENST00000538363 LENG9Q96B70 501 aa11.95□□□□□ -0.5
TNFRSF1A-211ENST00000538363 UNC45AQ9H3U1 944 aa11.95□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ABHD16BQ9H3Z7 469 aa11.95□□□□□ -0.5
TNFRSF1A-211ENST00000538363 JPH1Q9HDC5 661 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF1A-211ENST00000538363 DISC1Q9NRI5 854 aa11.95□□□□□ -0.5
TNFRSF1A-211ENST00000538363 SLC9A2Q9UBY0 812 aa11.95□□□□□ -0.5
TNFRSF1A-211ENST00000538363 KIAA1024Q9UPX6 916 aa11.95□□□□□ -0.5
TNFRSF1A-211ENST00000538363 DNM3Q9UQ16 869 aa11.95□□□□□ -0.5
TNFRSF1A-211ENST00000538363 PLXNA1Q9UIW2 1896 aa11.95□□□□□ -0.5
TNFRSF1A-211ENST00000538363 LCTP09848 1927 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 WDR64B1ANS9 1081 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 SLC26A4O43511 780 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 PSMD10O75832 226 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 SMC2O95347 1197 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 GGPS1O95749 300 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 HSPA1AP0DMV8 641 aaKnown RBP11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 HSPA1BP0DMV9 641 aaKnown RBP11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 CNGA1P29973 690 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ICAM3P32942 547 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 AFMP43652 599 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 CYP4A11Q02928 519 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 PPP2R5CQ13362 524 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 KRBA2Q6ZNG9 492 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 SV2BQ7L1I2 683 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 OTOP1Q7RTM1 612 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 TRMT1LQ7Z2T5 733 aaKnown RBP11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 FMR1NBQ8N0W7 255 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 IGSF22Q8N9C0 903 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 NEK9Q8TD19 979 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 TIGD1Q96MW7 591 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 EIF2AK1Q9BQI3 630 aaKnown RBP11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 CLSTN2Q9H4D0 955 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 AZI2Q9H6S1 392 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 SAGE1Q9NXZ1 904 aa11.94□□□□□ -0.5
TNFRSF1A-211ENST00000538363 NFASCO94856 1347 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 SYNGAP1Q96PV0 1343 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ATP9AO75110 1047 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 GNRH1P01148 92 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 SLFN14P0C7P3 912 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 PLCG1P19174 1290 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 EDNRBP24530 442 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 FLT3LGP49771 235 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ACVR2BQ13705 512 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 CTTNQ14247 550 aaKnown RBP11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 LY6KQ17RY6 165 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 LONRF3Q496Y0 759 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 BRDTQ58F21 947 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 FAM160B1Q5W0V3 765 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 IQSEC1Q6DN90 963 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ZNF746Q6NUN9 644 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 SMAP1Q8IYB5 467 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 DYDC2Q96IM9 177 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 TRIM47Q96LD4 638 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 SPATA33Q96N06 139 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 SENP7Q9BQF6 1050 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ARHGAP39Q9C0H5 1083 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 AP5M1Q9H0R1 490 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 CUEDC2Q9H467 287 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 TUFT1Q9NNX1 390 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 STK17AQ9UEE5 414 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 HPSEQ9Y251 543 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 PCDHA10Q9Y5I2 948 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 PCNTO95613 3336 aa11.93□□□□□ -0.5
TNFRSF1A-211ENST00000538363 GH1P01241 217 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 P4HBP07237 508 aaKnown RBP11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 RPA1P27694 616 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 TNFAIP2Q03169 654 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 PRKCZQ05513 592 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ITGB3BPQ13352 177 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 LAMC2Q13753 1193 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 UTP14CQ5TAP6 766 aaKnown RBP11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 OLFML2BQ68BL8 750 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 MAMDC4Q6UXC1 1216 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 BANK1Q8NDB2 785 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ENGASEQ8NFI3 743 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 RDM1Q8NG50 284 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 SEPT1Q8WYJ6 367 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 GLG1Q92896 1179 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ATP6V0A1Q93050 837 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 SMARCE1Q969G3 411 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 NACC1Q96RE7 527 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 POLR3CQ9BUI4 534 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 CFHR5Q9BXR6 569 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 ZSWIM4Q9H7M6 989 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 MAGEF1Q9HAY2 307 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 PDGFCQ9NRA1 345 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 TMEM63CQ9P1W3 806 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 DDX41Q9UJV9 622 aaKnown RBP11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 VAV3Q9UKW4 847 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 FAM184BQ9ULE4 1060 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 GABRQQ9UN88 632 aa11.92□□□□□ -0.5
TNFRSF1A-211ENST00000538363 TRPC6Q9Y210 931 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms