RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 NPR1P16066 1061 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 YY1P25490 414 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 HMGB2P26583 209 aaKnown RBP3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 OXCT1P55809 520 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 CALD1Q05682 793 aaKnown RBP3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 TNK2Q07912 1038 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 GCKRQ14397 625 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SF3B3Q15393 1217 aaKnown RBP3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ZYXQ15942 572 aaKnown RBP3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 MSMPQ1L6U9 139 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 LRRFIP1Q32MZ4 808 aaKnown RBP3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 TMEM201Q5SNT2 666 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 STYK1Q6J9G0 422 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 KIF6Q6ZMV9 814 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 JAZF1Q86VZ6 243 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SPACA3Q8IXA5 215 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 CCDC144CPQ8IYA2 1237 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 REXO1Q8N1G1 1221 aaKnown RBP3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 Q8N3U1 123 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ZBTB38Q8NAP3 1195 aaPredicted RBP3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 TTLL11Q8NHH1 800 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 DNAAF4Q8WXU2 420 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 MASTLQ96GX5 879 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 HSPA12BQ96MM6 686 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SLC9A7Q96T83 725 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 USP44Q9H0E7 712 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ASCC2Q9H1I8 757 aaPredicted RBP3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 GREM2Q9H772 168 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ATP13A1Q9HD20 1204 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ZNF277Q9NRM2 450 aaPredicted RBP3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 BSDC1Q9NW68 430 aaPredicted RBP3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SIRPGQ9P1W8 387 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 POLLQ9UGP5 575 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 TCEAL9Q9UHQ7 104 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 FBXL21Q9UKT6 434 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 PCDHB10Q9UN67 800 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SLC5A6Q9Y289 635 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 COL4A3BPQ9Y5P4 624 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SLX4Q8IY92 1834 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ABCC4O15439 1325 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SH3TC1Q8TE82 1336 aa3.18□□□□□ -1.9
TNFRSF1A-210ENST00000537842 NUP98P52948 1817 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 KIF13BQ9NQT8 1826 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SHTN1A0MZ66 631 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 CCDC85CA6NKD9 419 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 YDJCA8MPS7 323 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 WASH4PA8MWX3 477 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 KLF4O43474 513 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 HYAL3O43820 417 aaPredicted RBP3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 PLIN1O60240 522 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 PCCAP05165 728 aaPredicted RBP3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ACRP10323 421 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 KLRK1P26718 216 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 PDE6BP35913 854 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ETFBP38117 255 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 CAP2P40123 477 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 RNF4P78317 190 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 GPSM2P81274 684 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SNW1Q13573 536 aaKnown RBP3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 RAB33AQ14088 237 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 NKPD1Q17RQ9 610 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 PARP10Q53GL7 1025 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ANGEL2Q5VTE6 544 aaKnown RBP3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 DCAF15Q66K64 600 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ANKS3Q6ZW76 656 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 UBE3BQ7Z3V4 1068 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 TTC6Q86TZ1 520 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 CREG2Q8IUH2 290 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SMC5Q8IY18 1101 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ANKRD44Q8N8A2 993 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 DTWD2Q8NBA8 298 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 CCDC191Q8NCU4 936 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ADCY4Q8NFM4 1077 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 KLHDC4Q8TBB5 520 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 PPP1R13LQ8WUF5 828 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 UBE2FQ969M7 185 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SUCLG2Q96I99 432 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 CRAMP1Q96RY5 1269 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 PUS3Q9BZE2 481 aaKnown RBP3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 UBA5Q9GZZ9 404 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 CNNM2Q9H8M5 875 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 EHMT1Q9H9B1 1298 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 NMRK2Q9NPI5 230 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 CWC25Q9NXE8 425 aaPredicted RBP3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 CCDC39Q9UFE4 941 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 PRKAG3Q9UGI9 489 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 DUSP13Q9UII6 198 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 KCNH3Q9ULD8 1083 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 MINPP1Q9UNW1 487 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 PLAGL2Q9UPG8 496 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 CEP131Q9UPN4 1083 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ZNF652Q9Y2D9 606 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 CAPN6Q9Y6Q1 641 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 TAF1P21675 1872 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 RANBP2P49792 3224 aaKnown RBP3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 TNRC6CQ9HCJ0 1690 aaKnown RBP3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 UTYO14607 1347 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 IRS2Q9Y4H2 1338 aa3.17□□□□□ -1.9
TNFRSF1A-210ENST00000537842 TMEM265A0A087WTH1 108 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SHISA3A0PJX4 238 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms