RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 CALM3P0DP25 149 aa9.72□□□□□ -0.85
USP28-203ENST00000537490 GNAT1P11488 350 aa9.72□□□□□ -0.85
USP28-203ENST00000537490 TCF7P36402 384 aaPredicted RBP9.72□□□□□ -0.85
USP28-203ENST00000537490 HTRA4P83105 476 aaPredicted RBP9.72□□□□□ -0.85
USP28-203ENST00000537490 ARHGAP4P98171 946 aa9.72□□□□□ -0.85
USP28-203ENST00000537490 FAM26DQ5JW98 314 aa9.72□□□□□ -0.85
USP28-203ENST00000537490 TMTC3Q6ZXV5 915 aa9.72□□□□□ -0.85
USP28-203ENST00000537490 FANCBQ8NB91 859 aa9.72□□□□□ -0.85
USP28-203ENST00000537490 LMBR1Q8WVP7 490 aa9.72□□□□□ -0.85
USP28-203ENST00000537490 SEPT8Q92599 483 aa9.72□□□□□ -0.85
USP28-203ENST00000537490 HLA-CQ95604 372 aa9.72□□□□□ -0.85
USP28-203ENST00000537490 GPRASP2Q96D09 838 aa9.72□□□□□ -0.85
USP28-203ENST00000537490 C17orf80Q9BSJ5 609 aa9.72□□□□□ -0.85
USP28-203ENST00000537490 ANO2Q9NQ90 1003 aa9.72□□□□□ -0.85
USP28-203ENST00000537490 PKD2L1Q9P0L9 805 aa9.72□□□□□ -0.85
USP28-203ENST00000537490 ZNF215Q9UL58 517 aaPredicted RBP9.72□□□□□ -0.85
USP28-203ENST00000537490 PCDHA6Q9UN73 950 aa9.72□□□□□ -0.85
USP28-203ENST00000537490 INSL6Q9Y581 213 aa9.72□□□□□ -0.85
USP28-203ENST00000537490 PCDHA8Q9Y5H6 950 aa9.72□□□□□ -0.85
USP28-203ENST00000537490 UBIAD1Q9Y5Z9 338 aa9.72□□□□□ -0.85
USP28-203ENST00000537490 SLC12A7Q9Y666 1083 aa9.72□□□□□ -0.85
USP28-203ENST00000537490 PRUNE2Q8WUY3 3088 aa9.71□□□□□ -0.85
USP28-203ENST00000537490 VCANP13611 3396 aa9.71□□□□□ -0.85
USP28-203ENST00000537490 CAND2O75155 1236 aa9.71□□□□□ -0.86
USP28-203ENST00000537490 UPP2O95045 317 aa9.71□□□□□ -0.86
USP28-203ENST00000537490 CHRNA1P02708 482 aa9.71□□□□□ -0.86
USP28-203ENST00000537490 RUFY4Q6ZNE9 571 aa9.71□□□□□ -0.86
USP28-203ENST00000537490 SGMS1Q86VZ5 419 aa9.71□□□□□ -0.86
USP28-203ENST00000537490 MICU3Q86XE3 530 aa9.71□□□□□ -0.86
USP28-203ENST00000537490 GIMAP8Q8ND71 665 aaPredicted RBP9.71□□□□□ -0.86
USP28-203ENST00000537490 SP7Q8TDD2 431 aaPredicted RBP9.71□□□□□ -0.86
USP28-203ENST00000537490 SEPT1Q8WYJ6 367 aa9.71□□□□□ -0.86
USP28-203ENST00000537490 TOP1MTQ969P6 601 aa9.71□□□□□ -0.86
USP28-203ENST00000537490 TCEANC2Q96MN5 208 aa9.71□□□□□ -0.86
USP28-203ENST00000537490 JADE2Q9NQC1 790 aa9.71□□□□□ -0.86
USP28-203ENST00000537490 NRCAMQ92823 1304 aa9.71□□□□□ -0.86
USP28-203ENST00000537490 SPDYE3A6NKU9 549 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 COL9A1P20849 921 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 MARK3P27448 753 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 EXOSC10Q01780 885 aaKnown RBP9.7□□□□□ -0.86
USP28-203ENST00000537490 MGAT3Q09327 533 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 PPFIA1Q13136 1202 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 MTMR1Q13613 665 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 MARCH8Q5T0T0 291 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 WWC2Q6AWC2 1192 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 TYW1BQ6NUM6 668 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 HEATR3Q7Z4Q2 680 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 RPAINQ86UA6 219 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 RASEFQ8IZ41 740 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 FBXO22Q8NEZ5 403 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 CYP2W1Q8TAV3 490 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 CDHR1Q96JP9 859 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 PGBD1Q96JS3 809 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 NEK1Q96PY6 1258 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 PCYT2Q99447 389 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 EHMT1Q9H9B1 1298 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 RAPGEFL1Q9UHV5 662 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 BRPF3Q9ULD4 1205 aa9.7□□□□□ -0.86
USP28-203ENST00000537490 SPTBN5Q9NRC6 3674 aaKnown RBP9.7□□□□□ -0.86
USP28-203ENST00000537490 TCF20Q9UGU0 1960 aaKnown RBP9.7□□□□□ -0.86
USP28-203ENST00000537490 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.69□□□□□ -0.86
USP28-203ENST00000537490 MAFGO15525 162 aa9.69□□□□□ -0.86
USP28-203ENST00000537490 GHRP10912 638 aa9.69□□□□□ -0.86
USP28-203ENST00000537490 FUT2Q10981 343 aa9.69□□□□□ -0.86
USP28-203ENST00000537490 GRIK4Q16099 956 aa9.69□□□□□ -0.86
USP28-203ENST00000537490 ADCK5Q3MIX3 580 aa9.69□□□□□ -0.86
USP28-203ENST00000537490 EPC2Q52LR7 807 aa9.69□□□□□ -0.86
USP28-203ENST00000537490 BMP2KLQ5H9B9 411 aa9.69□□□□□ -0.86
USP28-203ENST00000537490 TAF2Q6P1X5 1199 aa9.69□□□□□ -0.86
USP28-203ENST00000537490 APOA5Q6Q788 366 aa9.69□□□□□ -0.86
USP28-203ENST00000537490 SYNE3Q6ZMZ3 975 aa9.69□□□□□ -0.86
USP28-203ENST00000537490 DNAJB3Q8WWF6 145 aa9.69□□□□□ -0.86
USP28-203ENST00000537490 CNTNAP5Q8WYK1 1306 aa9.69□□□□□ -0.86
USP28-203ENST00000537490 APBB2Q92870 758 aa9.69□□□□□ -0.86
USP28-203ENST00000537490 GLG1Q92896 1179 aa9.69□□□□□ -0.86
USP28-203ENST00000537490 ZBTB10Q96DT7 871 aa9.69□□□□□ -0.86
USP28-203ENST00000537490 YME1L1Q96TA2 773 aa9.69□□□□□ -0.86
USP28-203ENST00000537490 MXRA8Q9BRK3 442 aa9.69□□□□□ -0.86
USP28-203ENST00000537490 IFIH1Q9BYX4 1025 aaKnown RBP9.69□□□□□ -0.86
USP28-203ENST00000537490 SMARCAD1Q9H4L7 1026 aa9.69□□□□□ -0.86
USP28-203ENST00000537490 FAM217BQ9NTX9 383 aaPredicted RBP9.69□□□□□ -0.86
USP28-203ENST00000537490 ERAP1Q9NZ08 941 aa9.69□□□□□ -0.86
USP28-203ENST00000537490 V9GY48 417 aaPredicted RBP9.69□□□□□ -0.86
USP28-203ENST00000537490 NCOR1O75376 2440 aa9.68□□□□□ -0.86
USP28-203ENST00000537490 CHD7Q9P2D1 2997 aa9.68□□□□□ -0.86
USP28-203ENST00000537490 MBLAC1A4D2B0 266 aaPredicted RBP9.68□□□□□ -0.86
USP28-203ENST00000537490 H3BNC9 293 aa9.68□□□□□ -0.86
USP28-203ENST00000537490 ENPP3O14638 875 aa9.68□□□□□ -0.86
USP28-203ENST00000537490 ARP10275 920 aa9.68□□□□□ -0.86
USP28-203ENST00000537490 INSRRP14616 1297 aa9.68□□□□□ -0.86
USP28-203ENST00000537490 CDC27P30260 824 aa9.68□□□□□ -0.86
USP28-203ENST00000537490 NAPAP54920 295 aa9.68□□□□□ -0.86
USP28-203ENST00000537490 IGBP1P78318 339 aa9.68□□□□□ -0.86
USP28-203ENST00000537490 GPM6BQ13491 265 aa9.68□□□□□ -0.86
USP28-203ENST00000537490 LPIN1Q14693 890 aa9.68□□□□□ -0.86
USP28-203ENST00000537490 TSGA10IPQ3SY00 556 aa9.68□□□□□ -0.86
USP28-203ENST00000537490 RNF20Q5VTR2 975 aa9.68□□□□□ -0.86
USP28-203ENST00000537490 DHX32Q7L7V1 743 aaKnown RBP9.68□□□□□ -0.86
USP28-203ENST00000537490 TMEM192Q8IY95 271 aa9.68□□□□□ -0.86
USP28-203ENST00000537490 MRPL38Q96DV4 380 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms