RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 NCAPH2Q6IBW4 605 aa27.29■■□□□ 1.96
HMGA2-208ENST00000537429 SMAP1Q8IYB5 467 aaPredicted RBP27.29■■□□□ 1.96
HMGA2-208ENST00000537429 LRWD1Q9UFC0 647 aa27.29■■□□□ 1.96
HMGA2-208ENST00000537429 ATG7O95352 703 aa27.28■■□□□ 1.96
HMGA2-208ENST00000537429 RARBP10826 455 aa27.28■■□□□ 1.96
HMGA2-208ENST00000537429 SFNP31947 248 aa27.28■■□□□ 1.96
HMGA2-208ENST00000537429 RDM1Q8NG50 284 aa27.28■■□□□ 1.96
HMGA2-208ENST00000537429 GPR20Q99678 358 aa27.28■■□□□ 1.96
HMGA2-208ENST00000537429 MCOLN1Q9GZU1 580 aa27.28■■□□□ 1.96
HMGA2-208ENST00000537429 WDR64B1ANS9 1081 aa27.27■■□□□ 1.96
HMGA2-208ENST00000537429 MSCO60682 206 aa27.27■■□□□ 1.96
HMGA2-208ENST00000537429 JAK3P52333 1124 aa27.27■■□□□ 1.96
HMGA2-208ENST00000537429 MTFR1Q15390 333 aa27.27■■□□□ 1.96
HMGA2-208ENST00000537429 MIER3Q7Z3K6 550 aa27.27■■□□□ 1.96
HMGA2-208ENST00000537429 PPTC7Q8NI37 304 aa27.27■■□□□ 1.96
HMGA2-208ENST00000537429 ARMC5Q96C12 935 aa27.27■■□□□ 1.96
HMGA2-208ENST00000537429 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.27■■□□□ 1.96
HMGA2-208ENST00000537429 UNC93B1Q9H1C4 597 aa27.27■■□□□ 1.96
HMGA2-208ENST00000537429 DISC1Q9NRI5 854 aa27.27■■□□□ 1.96
HMGA2-208ENST00000537429 GSTTP1A0A1W2PQM5 241 aa27.26■■□□□ 1.96
HMGA2-208ENST00000537429 PP2D1A8MPX8 630 aa27.26■■□□□ 1.96
HMGA2-208ENST00000537429 GJA9P57773 515 aa27.26■■□□□ 1.96
HMGA2-208ENST00000537429 EPHA7Q15375 998 aa27.26■■□□□ 1.96
HMGA2-208ENST00000537429 SPECC1Q5M775 1068 aa27.26■■□□□ 1.96
HMGA2-208ENST00000537429 ABHD15Q6UXT9 468 aa27.26■■□□□ 1.96
HMGA2-208ENST00000537429 AFG1LQ8WV93 481 aa27.26■■□□□ 1.96
HMGA2-208ENST00000537429 SEPT1Q8WYJ6 367 aa27.26■■□□□ 1.96
HMGA2-208ENST00000537429 ZNF333Q96JL9 665 aa27.26■■□□□ 1.96
HMGA2-208ENST00000537429 AP5M1Q9H0R1 490 aa27.26■■□□□ 1.96
HMGA2-208ENST00000537429 SAMM50Q9Y512 469 aa27.26■■□□□ 1.96
HMGA2-208ENST00000537429 PCDHA10Q9Y5I2 948 aa27.26■■□□□ 1.96
HMGA2-208ENST00000537429 BRCA2P51587 3418 aa27.26■■□□□ 1.95
HMGA2-208ENST00000537429 NOP56O00567 594 aaKnown RBP27.26■■□□□ 1.95
HMGA2-208ENST00000537429 CCL5P13501 91 aa27.26■■□□□ 1.95
HMGA2-208ENST00000537429 CDC25AP30304 524 aa27.26■■□□□ 1.95
HMGA2-208ENST00000537429 NKX3-2P78367 333 aa27.26■■□□□ 1.95
HMGA2-208ENST00000537429 LHX8Q68G74 356 aa27.26■■□□□ 1.95
HMGA2-208ENST00000537429 SHC4Q6S5L8 630 aa27.26■■□□□ 1.95
HMGA2-208ENST00000537429 RNF208Q9H0X6 261 aa27.26■■□□□ 1.95
HMGA2-208ENST00000537429 UPF3AQ9H1J1 476 aaKnown RBP27.26■■□□□ 1.95
HMGA2-208ENST00000537429 PAK6Q9NQU5 681 aaPredicted RBP27.26■■□□□ 1.95
HMGA2-208ENST00000537429 SYNRGQ9UMZ2 1314 aa27.25■■□□□ 1.95
HMGA2-208ENST00000537429 A6NJR5 290 aa27.25■■□□□ 1.95
HMGA2-208ENST00000537429 USP49Q70CQ1 688 aa27.25■■□□□ 1.95
HMGA2-208ENST00000537429 EPSTI1Q96J88 318 aa27.25■■□□□ 1.95
HMGA2-208ENST00000537429 XPNPEP3Q9NQH7 507 aa27.25■■□□□ 1.95
HMGA2-208ENST00000537429 CTAGE5O15320 804 aa27.24■■□□□ 1.95
HMGA2-208ENST00000537429 SUPT20HL2P0C7V6 817 aa27.24■■□□□ 1.95
HMGA2-208ENST00000537429 TCF7P36402 384 aaPredicted RBP27.24■■□□□ 1.95
HMGA2-208ENST00000537429 IRX5P78411 483 aaPredicted RBP27.24■■□□□ 1.95
HMGA2-208ENST00000537429 MIS18BP1Q6P0N0 1132 aa27.24■■□□□ 1.95
HMGA2-208ENST00000537429 HSD17B14Q9BPX1 270 aa27.24■■□□□ 1.95
HMGA2-208ENST00000537429 EIF2AK1Q9BQI3 630 aaKnown RBP27.24■■□□□ 1.95
HMGA2-208ENST00000537429 MMTAG2Q9BU76 263 aaKnown RBP27.24■■□□□ 1.95
HMGA2-208ENST00000537429 SPC25Q9HBM1 224 aa27.24■■□□□ 1.95
HMGA2-208ENST00000537429 STK24Q9Y6E0 443 aa27.24■■□□□ 1.95
HMGA2-208ENST00000537429 IGKV6D-21A0A0A0MT36 114 aa27.23■■□□□ 1.95
HMGA2-208ENST00000537429 A0A1W2PQ27 194 aa27.23■■□□□ 1.95
HMGA2-208ENST00000537429 A0A1W2PQ64 194 aa27.23■■□□□ 1.95
HMGA2-208ENST00000537429 A0A1W2PQD8 194 aa27.23■■□□□ 1.95
HMGA2-208ENST00000537429 ADAMTS4O75173 837 aa27.23■■□□□ 1.95
HMGA2-208ENST00000537429 PPFIA4O75335 1185 aa27.23■■□□□ 1.95
HMGA2-208ENST00000537429 PRPF40AO75400 957 aaKnown RBP27.23■■□□□ 1.95
HMGA2-208ENST00000537429 PSAPP07602 524 aa27.23■■□□□ 1.95
HMGA2-208ENST00000537429 MMP3P08254 477 aa27.23■■□□□ 1.95
HMGA2-208ENST00000537429 HOXD8P13378 290 aaPredicted RBP27.23■■□□□ 1.95
HMGA2-208ENST00000537429 SYMPKQ92797 1274 aaKnown RBP27.23■■□□□ 1.95
HMGA2-208ENST00000537429 CCSER1Q9C0I3 900 aa27.23■■□□□ 1.95
HMGA2-208ENST00000537429 PGK1P00558 417 aa27.22■■□□□ 1.95
HMGA2-208ENST00000537429 MYCNP04198 464 aaPredicted RBP27.22■■□□□ 1.95
HMGA2-208ENST00000537429 CMA1P23946 247 aa27.22■■□□□ 1.95
HMGA2-208ENST00000537429 UBA7P41226 1012 aa27.22■■□□□ 1.95
HMGA2-208ENST00000537429 CPT1AP50416 773 aa27.22■■□□□ 1.95
HMGA2-208ENST00000537429 RESP18Q5W5W9 173 aa27.22■■□□□ 1.95
HMGA2-208ENST00000537429 KRT79Q5XKE5 535 aa27.22■■□□□ 1.95
HMGA2-208ENST00000537429 ERMNQ8TAM6 284 aa27.22■■□□□ 1.95
HMGA2-208ENST00000537429 RGL1Q9NZL6 768 aa27.22■■□□□ 1.95
HMGA2-208ENST00000537429 GOLGA6L22H0YM25 854 aa27.21■■□□□ 1.95
HMGA2-208ENST00000537429 GADD45BO75293 160 aaPredicted RBP27.21■■□□□ 1.95
HMGA2-208ENST00000537429 SLITRK3O94933 977 aa27.21■■□□□ 1.95
HMGA2-208ENST00000537429 P4HBP07237 508 aaKnown RBP27.21■■□□□ 1.95
HMGA2-208ENST00000537429 C6orf222P0C671 652 aaPredicted RBP27.21■■□□□ 1.95
HMGA2-208ENST00000537429 RPA1P27694 616 aa27.21■■□□□ 1.95
HMGA2-208ENST00000537429 FSCN1Q16658 493 aaKnown RBP27.21■■□□□ 1.95
HMGA2-208ENST00000537429 HAUS3Q68CZ6 603 aa27.21■■□□□ 1.95
HMGA2-208ENST00000537429 CABP7Q86V35 215 aa27.21■■□□□ 1.95
HMGA2-208ENST00000537429 CCDC60Q8IWA6 550 aaPredicted RBP27.21■■□□□ 1.95
HMGA2-208ENST00000537429 NEK9Q8TD19 979 aa27.21■■□□□ 1.95
HMGA2-208ENST00000537429 SNX29Q8TEQ0 813 aa27.21■■□□□ 1.95
HMGA2-208ENST00000537429 PCYT2Q99447 389 aa27.21■■□□□ 1.95
HMGA2-208ENST00000537429 POLR3CQ9BUI4 534 aaPredicted RBP27.21■■□□□ 1.95
HMGA2-208ENST00000537429 FRMPD3Q5JV73 1810 aa27.21■■□□□ 1.95
HMGA2-208ENST00000537429 MYADML2A6NDP7 307 aa27.21■■□□□ 1.95
HMGA2-208ENST00000537429 GOLGA6L4A6NEF3 574 aa27.21■■□□□ 1.95
HMGA2-208ENST00000537429 LGR5O75473 907 aa27.21■■□□□ 1.95
HMGA2-208ENST00000537429 SPATA31C1P0DKV0 1188 aa27.21■■□□□ 1.95
HMGA2-208ENST00000537429 DGKDQ16760 1214 aa27.21■■□□□ 1.95
HMGA2-208ENST00000537429 SWSAP1Q6NVH7 229 aa27.21■■□□□ 1.95
HMGA2-208ENST00000537429 CATSPER3Q86XQ3 398 aa27.21■■□□□ 1.95
HMGA2-208ENST00000537429 KLHDC9Q8NEP7 349 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms