RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 RXRAP19793 462 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 ARHGAP4P98171 946 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 FGD1P98174 961 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 MTMR1Q13613 665 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 KRT32Q14532 448 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 GPNMBQ14956 572 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 NECTIN1Q15223 517 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 BMP2KLQ5H9B9 411 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 FAM117BQ6P1L5 589 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 TMTC3Q6ZXV5 915 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 CENPQQ7L2Z9 268 aaPredicted RBP11.27□□□□□ -0.61
CCDC170-202ENST00000537358 SGMS1Q86VZ5 419 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 TEX2Q8IWB9 1127 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 MYOCDQ8IZQ8 938 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 CMTR1Q8N1G2 835 aaKnown RBP11.27□□□□□ -0.61
CCDC170-202ENST00000537358 DBF4BQ8NFT6 615 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 APBB2Q92870 758 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 NEK1Q96PY6 1258 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 LRRC2Q9BYS8 371 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 SETD4Q9NVD3 440 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 LMCD1Q9NZU5 365 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 SIP14410 1827 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 NRCAMQ92823 1304 aa11.27□□□□□ -0.61
CCDC170-202ENST00000537358 COL4A4P53420 1690 aaPredicted RBP11.27□□□□□ -0.61
CCDC170-202ENST00000537358 RPLP2P05387 115 aaKnown RBP11.26□□□□□ -0.61
CCDC170-202ENST00000537358 CTSHP09668 335 aa11.26□□□□□ -0.61
CCDC170-202ENST00000537358 HOXC8P31273 242 aa11.26□□□□□ -0.61
CCDC170-202ENST00000537358 TCF7P36402 384 aaPredicted RBP11.26□□□□□ -0.61
CCDC170-202ENST00000537358 NAPAP54920 295 aa11.26□□□□□ -0.61
CCDC170-202ENST00000537358 SEMA3FQ13275 785 aa11.26□□□□□ -0.61
CCDC170-202ENST00000537358 GRB10Q13322 594 aa11.26□□□□□ -0.61
CCDC170-202ENST00000537358 PLEKHG4Q58EX7 1191 aa11.26□□□□□ -0.61
CCDC170-202ENST00000537358 TAF2Q6P1X5 1199 aa11.26□□□□□ -0.61
CCDC170-202ENST00000537358 SEPT1Q8WYJ6 367 aa11.26□□□□□ -0.61
CCDC170-202ENST00000537358 GLG1Q92896 1179 aa11.26□□□□□ -0.61
CCDC170-202ENST00000537358 WNT8BQ93098 351 aa11.26□□□□□ -0.61
CCDC170-202ENST00000537358 GLT8D2Q9H1C3 349 aa11.26□□□□□ -0.61
CCDC170-202ENST00000537358 ERAP1Q9NZ08 941 aa11.26□□□□□ -0.61
CCDC170-202ENST00000537358 MTUS1Q9ULD2 1270 aa11.26□□□□□ -0.61
CCDC170-202ENST00000537358 TCF20Q9UGU0 1960 aaKnown RBP11.26□□□□□ -0.61
CCDC170-202ENST00000537358 NCOR1O75376 2440 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 LCHNA4D1U4 455 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 EPOPA6NHQ4 379 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 hCG_1984214I3L0E3 225 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 ZBTB43O43298 467 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 FOSP01100 380 aaPredicted RBP11.25□□□□□ -0.61
CCDC170-202ENST00000537358 HMGB1P09429 215 aaKnown RBP11.25□□□□□ -0.61
CCDC170-202ENST00000537358 ERVK-21P61565 698 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 PPFIA1Q13136 1202 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 HIC1Q14526 733 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 MBTPS1Q14703 1052 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 UBE2SQ16763 222 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 RTN1Q16799 776 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 PPP1R18Q6NYC8 613 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 TRAF7Q6Q0C0 670 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 APOA5Q6Q788 366 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 TMCO2Q7Z6W1 182 aaPredicted RBP11.25□□□□□ -0.61
CCDC170-202ENST00000537358 TRIM50Q86XT4 487 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 RAB11FIP4Q86YS3 637 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 ZNF713Q8N859 430 aaPredicted RBP11.25□□□□□ -0.61
CCDC170-202ENST00000537358 LMBR1Q8WVP7 490 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 HLA-CQ95604 372 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 SAMD11Q96NU1 681 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 YME1L1Q96TA2 773 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 SDF4Q9BRK5 362 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 SMARCAD1Q9H4L7 1026 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 AZI2Q9H6S1 392 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 BCAS3Q9H6U6 928 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 NAP1L2Q9ULW6 460 aaPredicted RBP11.25□□□□□ -0.61
CCDC170-202ENST00000537358 PCDHA6Q9UN73 950 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 PCDHA8Q9Y5H6 950 aa11.25□□□□□ -0.61
CCDC170-202ENST00000537358 CCDC196A0A1B0GTZ2 297 aa11.24□□□□□ -0.61
CCDC170-202ENST00000537358 hCG_1642624A0A1W2PR95 340 aa11.24□□□□□ -0.61
CCDC170-202ENST00000537358 LINC01553A4QN01 128 aa11.24□□□□□ -0.61
CCDC170-202ENST00000537358 GOLGA8AA7E2F4 631 aa11.24□□□□□ -0.61
CCDC170-202ENST00000537358 GOLGA8BA8MQT2 603 aa11.24□□□□□ -0.61
CCDC170-202ENST00000537358 CDC45O75419 566 aa11.24□□□□□ -0.61
CCDC170-202ENST00000537358 ARHGEF15O94989 841 aa11.24□□□□□ -0.61
CCDC170-202ENST00000537358 KCNA2P16389 499 aa11.24□□□□□ -0.61
CCDC170-202ENST00000537358 TFF2Q03403 129 aa11.24□□□□□ -0.61
CCDC170-202ENST00000537358 PTPROQ16827 1216 aa11.24□□□□□ -0.61
CCDC170-202ENST00000537358 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCDC170-202ENST00000537358 DHX32Q7L7V1 743 aaKnown RBP11.24□□□□□ -0.61
CCDC170-202ENST00000537358 FBXO22Q8NEZ5 403 aa11.24□□□□□ -0.61
CCDC170-202ENST00000537358 GDPD5Q8WTR4 605 aa11.24□□□□□ -0.61
CCDC170-202ENST00000537358 IFIH1Q9BYX4 1025 aaKnown RBP11.24□□□□□ -0.61
CCDC170-202ENST00000537358 JPH1Q9HDC5 661 aaPredicted RBP11.24□□□□□ -0.61
CCDC170-202ENST00000537358 JADE2Q9NQC1 790 aa11.24□□□□□ -0.61
CCDC170-202ENST00000537358 PKD2L1Q9P0L9 805 aa11.24□□□□□ -0.61
CCDC170-202ENST00000537358 TUBE1Q9UJT0 475 aa11.24□□□□□ -0.61
CCDC170-202ENST00000537358 UBIAD1Q9Y5Z9 338 aa11.24□□□□□ -0.61
CCDC170-202ENST00000537358 SPTBN5Q9NRC6 3674 aaKnown RBP11.23□□□□□ -0.61
CCDC170-202ENST00000537358 RRN3P2A6NIE6 340 aa11.23□□□□□ -0.61
CCDC170-202ENST00000537358 M0QZ92 97 aa11.23□□□□□ -0.61
CCDC170-202ENST00000537358 UPP2O95045 317 aa11.23□□□□□ -0.61
CCDC170-202ENST00000537358 PYGBP11216 843 aa11.23□□□□□ -0.61
CCDC170-202ENST00000537358 ITGB5P18084 799 aa11.23□□□□□ -0.61
CCDC170-202ENST00000537358 MARK3P27448 753 aa11.23□□□□□ -0.61
CCDC170-202ENST00000537358 ZNF76P36508 570 aa11.23□□□□□ -0.61
CCDC170-202ENST00000537358 ADCY7P51828 1080 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms