RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 C16orf70Q9BSU1 422 aa6.12□□□□□ -1.43
SNHG1-204ENST00000537068 LRFN3Q9BTN0 628 aa6.12□□□□□ -1.43
SNHG1-204ENST00000537068 DSCC1Q9BVC3 393 aa6.12□□□□□ -1.43
SNHG1-204ENST00000537068 KATNAL1Q9BW62 490 aa6.12□□□□□ -1.43
SNHG1-204ENST00000537068 FTOQ9C0B1 505 aaKnown RBP eCLIP6.12□□□□□ -1.43
SNHG1-204ENST00000537068 EPHX3Q9H6B9 360 aa6.12□□□□□ -1.43
SNHG1-204ENST00000537068 CERS4Q9HA82 394 aa6.12□□□□□ -1.43
SNHG1-204ENST00000537068 SUGCTQ9HAC7 445 aa6.12□□□□□ -1.43
SNHG1-204ENST00000537068 C11orf16Q9NQ32 467 aa6.12□□□□□ -1.43
SNHG1-204ENST00000537068 PXMP2Q9NR77 195 aa6.12□□□□□ -1.43
SNHG1-204ENST00000537068 MRPL11Q9Y3B7 192 aaKnown RBP6.12□□□□□ -1.43
SNHG1-204ENST00000537068 BAZ2BQ9UIF8 2168 aaKnown RBP6.11□□□□□ -1.43
SNHG1-204ENST00000537068 BDP1A6H8Y1 2624 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 LINC01553A4QN01 128 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 PALM3A6NDB9 673 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-204ENST00000537068 B4E1Z4 1266 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 PI4K2BG5E9Z4 385 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 SPTLC1O15269 473 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 PPP1R11O60927 126 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-204ENST00000537068 KCNJ6P48051 423 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 ADAM17P78536 824 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 LSM11P83369 360 aaKnown RBP eCLIP6.11□□□□□ -1.431e-6■□□□□ 9.9
SNHG1-204ENST00000537068 IKBKEQ14164 716 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 PGM5Q15124 567 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 HSDL1Q3SXM5 330 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 PLEKHG4Q58EX7 1191 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 CELF3Q5SZQ8 465 aaKnown RBP6.11□□□□□ -1.43
SNHG1-204ENST00000537068 SWT1Q5T5J6 900 aaKnown RBP6.11□□□□□ -1.43
SNHG1-204ENST00000537068 ARHGEF16Q5VV41 709 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 TMCO2Q7Z6W1 182 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-204ENST00000537068 SERINC5Q86VE9 423 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 STAG2Q8N3U4 1231 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 ARNTL2Q8WYA1 636 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 TGS1Q96RS0 853 aaKnown RBP6.11□□□□□ -1.43
SNHG1-204ENST00000537068 CRBNQ96SW2 442 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 PDCD2LQ9BRP1 358 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 AMNQ9BXJ7 453 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 RIOX1Q9H6W3 641 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 KAT14Q9H8E8 782 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 CD320Q9NPF0 282 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 MAD2L2Q9UI95 211 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 NOD1Q9Y239 953 aa6.11□□□□□ -1.43
SNHG1-204ENST00000537068 EMSYQ7Z589 1322 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 ARHGAP33O14559 1287 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 ZBTB5O15062 677 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 TRAK2O60296 914 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 LGR5O75473 907 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 CFBP00751 764 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 IGHDP01880 384 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 PARP1P09874 1014 aaKnown RBP6.1□□□□□ -1.43
SNHG1-204ENST00000537068 EIF2AK2P19525 551 aaKnown RBP6.1□□□□□ -1.43
SNHG1-204ENST00000537068 ICAM3P32942 547 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 ZNF200P98182 395 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-204ENST00000537068 GUCA2AQ02747 115 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 NUCB1Q02818 461 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 COL19A1Q14993 1142 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 KIAA0753Q2KHM9 967 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 SLC35G1Q2M3R5 365 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 LEXMQ3ZCV2 418 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 CWC27Q6UX04 472 aaKnown RBP6.1□□□□□ -1.43
SNHG1-204ENST00000537068 CHST3Q7LGC8 479 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 CHD1LQ86WJ1 897 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 FAM178BQ8IXR5 827 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 DHX37Q8IY37 1157 aaKnown RBP6.1□□□□□ -1.43
SNHG1-204ENST00000537068 MICALL1Q8N3F8 863 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 C7orf31Q8N865 590 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 DBF4BQ8NFT6 615 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-204ENST00000537068 NEK9Q8TD19 979 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 TOP1MTQ969P6 601 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 RILPL2Q969X0 211 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 KRT23Q9C075 422 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 LNPKQ9C0E8 428 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 IL25Q9H293 177 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 RNPEPQ9H4A4 650 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 CNNM2Q9H8M5 875 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 INSL6Q9Y581 213 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 MRVI1Q9Y6F6 885 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 KIAA1671Q9BY89 1806 aa6.1□□□□□ -1.43
SNHG1-204ENST00000537068 TTC3P53804 2025 aa6.09□□□□□ -1.43
SNHG1-204ENST00000537068 BRWD1Q9NSI6 2320 aa6.09□□□□□ -1.43
SNHG1-204ENST00000537068 FRMPD4Q14CM0 1322 aa6.09□□□□□ -1.43
SNHG1-204ENST00000537068 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-204ENST00000537068 RSPH10B2B2RC85 870 aa6.09□□□□□ -1.43
SNHG1-204ENST00000537068 KLRF2D3W0D1 207 aa6.09□□□□□ -1.43
SNHG1-204ENST00000537068 H3BNC9 293 aa6.09□□□□□ -1.43
SNHG1-204ENST00000537068 H3BRB1 525 aa6.09□□□□□ -1.43
SNHG1-204ENST00000537068 HIP1O00291 1037 aa6.09□□□□□ -1.43
SNHG1-204ENST00000537068 CYTH3O43739 400 aa6.09□□□□□ -1.43
SNHG1-204ENST00000537068 CAND2O75155 1236 aa6.09□□□□□ -1.43
SNHG1-204ENST00000537068 LINC00271P0C7V0 271 aa6.09□□□□□ -1.43
SNHG1-204ENST00000537068 RSPH10BP0C881 870 aa6.09□□□□□ -1.43
SNHG1-204ENST00000537068 MRPS9P82933 396 aaKnown RBP6.09□□□□□ -1.43
SNHG1-204ENST00000537068 TROAPQ12815 778 aa6.09□□□□□ -1.43
SNHG1-204ENST00000537068 IMMTQ16891 758 aaKnown RBP6.09□□□□□ -1.43
SNHG1-204ENST00000537068 FAM26DQ5JW98 314 aa6.09□□□□□ -1.43
SNHG1-204ENST00000537068 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.09□□□□□ -1.43
SNHG1-204ENST00000537068 CYB5R4Q7L1T6 521 aa6.09□□□□□ -1.43
SNHG1-204ENST00000537068 GDPD5Q8WTR4 605 aa6.09□□□□□ -1.43
SNHG1-204ENST00000537068 FAM122AQ96E09 287 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms