RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 PDCD7Q8N8D1 485 aaKnown RBP5.85□□□□□ -1.47
PTPRD-213ENST00000537002 LRRC8CQ8TDW0 803 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 SREK1Q8WXA9 508 aaKnown RBP5.85□□□□□ -1.47
PTPRD-213ENST00000537002 PBKQ96KB5 322 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 RILPQ96NA2 401 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 UIMC1Q96RL1 719 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 HAUS7Q99871 368 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 HSD3B7Q9H2F3 369 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 SRPRBQ9Y5M8 271 aaKnown RBP5.85□□□□□ -1.47
PTPRD-213ENST00000537002 PDHBP11177 359 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 ALADP13716 330 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 MAGOHP61326 146 aaKnown RBP5.85□□□□□ -1.47
PTPRD-213ENST00000537002 MAP7D1Q3KQU3 841 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 NFRKBQ6P4R8 1299 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 BTNL9Q6UXG8 535 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 ANKRD23Q86SG2 305 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 MAGOHBQ96A72 148 aaKnown RBP5.85□□□□□ -1.47
PTPRD-213ENST00000537002 TUBGCP2Q9BSJ2 902 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 SLITRK6Q9H5Y7 841 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 DMAP1Q9NPF5 467 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-213ENST00000537002 DIS3Q9Y2L1 958 aaKnown RBP5.85□□□□□ -1.47
PTPRD-213ENST00000537002 UTYO14607 1347 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 PTPRUQ92729 1446 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 THAP12O43422 761 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 RAD23BP54727 409 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 RCN2Q14257 317 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 MEA1Q16626 185 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 IRGCQ6NXR0 463 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 USP31Q70CQ4 1352 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 HS2ST1Q7LGA3 356 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 AGGF1Q8N302 714 aaeCLIP5.85□□□□□ -1.47
PTPRD-213ENST00000537002 GJB4Q9NTQ9 266 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 ZC3H4Q9UPT8 1303 aaKnown RBP5.85□□□□□ -1.47
PTPRD-213ENST00000537002 XRN1Q8IZH2 1706 aaKnown RBP5.85□□□□□ -1.47
PTPRD-213ENST00000537002 LGALS16A8MUM7 142 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 AGPSO00116 658 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 SMNDC1O75940 238 aaKnown RBP eCLIP5.85□□□□□ -1.47
PTPRD-213ENST00000537002 ADCY8P40145 1251 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 KPNB1Q14974 876 aaKnown RBP5.85□□□□□ -1.47
PTPRD-213ENST00000537002 CDC37Q16543 378 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-213ENST00000537002 LRRC43Q8N309 656 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 CRNKL1Q9BZJ0 848 aaKnown RBP5.85□□□□□ -1.47
PTPRD-213ENST00000537002 AFF2P51816 1311 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 SPDYE3A6NKU9 549 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 SEC24CP53992 1094 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 IL9RQ01113 521 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 KCNB1Q14721 858 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 FOXR2Q6PJQ5 311 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 NAF1Q96HR8 494 aaKnown RBP5.85□□□□□ -1.47
PTPRD-213ENST00000537002 CENPKQ9BS16 269 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 DDX23Q9BUQ8 820 aaKnown RBP5.85□□□□□ -1.47
PTPRD-213ENST00000537002 CCDC134Q9H6E4 229 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 BTG4Q9NY30 223 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 TMOD3Q9NYL9 352 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 NOC2LQ9Y3T9 749 aaKnown RBP5.85□□□□□ -1.47
PTPRD-213ENST00000537002 FAM13AO94988 1023 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 TMED2Q15363 201 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 PPP1R21Q6ZMI0 780 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 AIFM3Q96NN9 605 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 THEGQ9P2T0 379 aa5.85□□□□□ -1.47
PTPRD-213ENST00000537002 SSU72P8A0A1W2PR75 194 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 ZNF185O15231 689 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 FOXN1O15353 648 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 RAB27AP51159 221 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 CCNHP51946 323 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-213ENST00000537002 RBM5P52756 815 aaKnown RBP eCLIP5.84□□□□□ -1.47
PTPRD-213ENST00000537002 GSTA3Q16772 222 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 AKAP4Q5JQC9 854 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 APPBP2Q92624 585 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 PURBQ96QR8 312 aaKnown RBP5.84□□□□□ -1.47
PTPRD-213ENST00000537002 IL25Q9H293 177 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 SLC39A2Q9NP94 309 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 ANLNQ9NQW6 1124 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 IGSF1Q8N6C5 1336 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 PHF20L1A8MW92 1017 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 TRPA1O75762 1119 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 GYPCP04921 128 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 CASP1P29466 404 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 ZAP70P43403 619 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 ELF3P78545 371 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-213ENST00000537002 INF2Q27J81 1249 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 ZC3H12AQ5D1E8 599 aaKnown RBP5.84□□□□□ -1.47
PTPRD-213ENST00000537002 ST13P4Q8IZP2 240 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-213ENST00000537002 NEK9Q8TD19 979 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 CYTH2Q99418 400 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 LRRC1Q9BTT6 524 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 ZNF148Q9UQR1 794 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 CPS1P31327 1500 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 NEDD4P46934 1319 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 EYA2O00167 538 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 PGRMC1O00264 195 aaKnown RBP5.84□□□□□ -1.47
PTPRD-213ENST00000537002 ACBD5Q5T8D3 534 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-213ENST00000537002 PAGE5Q96GU1 130 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 DHTKD1Q96HY7 919 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-213ENST00000537002 TMBIM4Q9HC24 238 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 GDF3Q9NR23 364 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 TUBA8Q9NY65 449 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-213ENST00000537002 TBK1Q9UHD2 729 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 LRCH1Q9Y2L9 728 aa5.84□□□□□ -1.47
PTPRD-213ENST00000537002 ANP32DO95626 131 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms