RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 PPP1R18Q6NYC8 613 aa14.29□□□□□ -0.12
PRKDC-207ENST00000536483 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.29□□□□□ -0.128e-17■■■■□ 26.2
PRKDC-207ENST00000536483 Q6ZUG5 572 aa14.29□□□□□ -0.12
PRKDC-207ENST00000536483 RUFY3Q7L099 469 aa14.29□□□□□ -0.12
PRKDC-207ENST00000536483 FCHSD1Q86WN1 690 aa14.29□□□□□ -0.12
PRKDC-207ENST00000536483 C16orf70Q9BSU1 422 aa14.29□□□□□ -0.12
PRKDC-207ENST00000536483 C1QTNF1Q9BXJ1 281 aa14.29□□□□□ -0.12
PRKDC-207ENST00000536483 EPHX3Q9H6B9 360 aa14.29□□□□□ -0.12
PRKDC-207ENST00000536483 MLXIPQ9HAP2 919 aa14.29□□□□□ -0.12
PRKDC-207ENST00000536483 LMCD1Q9NZU5 365 aa14.29□□□□□ -0.12
PRKDC-207ENST00000536483 SPATA31C2B4DYI2 1134 aa14.28□□□□□ -0.12
PRKDC-207ENST00000536483 CPA1P15085 419 aa14.28□□□□□ -0.12
PRKDC-207ENST00000536483 THPOP40225 353 aa14.28□□□□□ -0.12
PRKDC-207ENST00000536483 USP17L6PQ6QN14 398 aa14.28□□□□□ -0.12
PRKDC-207ENST00000536483 SERINC5Q86VE9 423 aa14.28□□□□□ -0.12
PRKDC-207ENST00000536483 DBF4BQ8NFT6 615 aa14.28□□□□□ -0.12
PRKDC-207ENST00000536483 PIBF1Q8WXW3 757 aa14.28□□□□□ -0.12
PRKDC-207ENST00000536483 BRF1Q92994 677 aa14.28□□□□□ -0.12
PRKDC-207ENST00000536483 CUL5Q93034 780 aa14.28□□□□□ -0.12
PRKDC-207ENST00000536483 SENP7Q9BQF6 1050 aa14.28□□□□□ -0.12
PRKDC-207ENST00000536483 GLT8D2Q9H1C3 349 aa14.28□□□□□ -0.12
PRKDC-207ENST00000536483 BCAS3Q9H6U6 928 aa14.28□□□□□ -0.12
PRKDC-207ENST00000536483 BRWD1Q9NSI6 2320 aa14.28□□□□□ -0.12
PRKDC-207ENST00000536483 COL4A4P53420 1690 aaPredicted RBP14.27□□□□□ -0.12
PRKDC-207ENST00000536483 C17orf102A2RUQ5 167 aa14.27□□□□□ -0.13
PRKDC-207ENST00000536483 GOLGA8AA7E2F4 631 aa14.27□□□□□ -0.13
PRKDC-207ENST00000536483 GOLGA8BA8MQT2 603 aa14.27□□□□□ -0.13
PRKDC-207ENST00000536483 RSPH10B2B2RC85 870 aa14.27□□□□□ -0.13
PRKDC-207ENST00000536483 H3BRB1 525 aa14.27□□□□□ -0.13
PRKDC-207ENST00000536483 EIF5BO60841 1220 aaKnown RBP14.27□□□□□ -0.13
PRKDC-207ENST00000536483 RSPH10BP0C881 870 aa14.27□□□□□ -0.13
PRKDC-207ENST00000536483 ADD1P35611 737 aaKnown RBP14.27□□□□□ -0.13
PRKDC-207ENST00000536483 METAP2P50579 478 aaKnown RBP eCLIP14.27□□□□□ -0.133e-7■■■■■ 27.6
PRKDC-207ENST00000536483 ANAPC15P60006 121 aa14.27□□□□□ -0.13
PRKDC-207ENST00000536483 NTRK3Q16288 839 aa14.27□□□□□ -0.13
PRKDC-207ENST00000536483 GNPTABQ3T906 1256 aa14.27□□□□□ -0.13
PRKDC-207ENST00000536483 RAB11FIP4Q86YS3 637 aa14.27□□□□□ -0.13
PRKDC-207ENST00000536483 CCDC82Q8N4S0 544 aa14.27□□□□□ -0.13
PRKDC-207ENST00000536483 SMARCC2Q8TAQ2 1214 aa14.27□□□□□ -0.13
PRKDC-207ENST00000536483 ATP6V0A1Q93050 837 aa14.27□□□□□ -0.13
PRKDC-207ENST00000536483 TUT1Q9H6E5 874 aaKnown RBP14.27□□□□□ -0.13
PRKDC-207ENST00000536483 RIC8AQ9NPQ8 531 aa14.27□□□□□ -0.13
PRKDC-207ENST00000536483 BARHL2Q9NY43 387 aa14.27□□□□□ -0.13
PRKDC-207ENST00000536483 INSL6Q9Y581 213 aa14.27□□□□□ -0.13
PRKDC-207ENST00000536483 V9GY48 417 aaPredicted RBP14.27□□□□□ -0.13
PRKDC-207ENST00000536483 EMSYQ7Z589 1322 aa14.26□□□□□ -0.13
PRKDC-207ENST00000536483 MAFGO15525 162 aa14.26□□□□□ -0.13
PRKDC-207ENST00000536483 TREHO43280 583 aa14.26□□□□□ -0.13
PRKDC-207ENST00000536483 PRPF3O43395 683 aaKnown RBP14.26□□□□□ -0.13
PRKDC-207ENST00000536483 FIBPO43427 364 aa14.26□□□□□ -0.13
PRKDC-207ENST00000536483 AMHP03971 560 aa14.26□□□□□ -0.13
PRKDC-207ENST00000536483 LGALS2P05162 132 aa14.26□□□□□ -0.13
PRKDC-207ENST00000536483 SMIM10L2AP0DMW4 78 aa14.26□□□□□ -0.13
PRKDC-207ENST00000536483 SMIM10L2BP0DMW5 78 aa14.26□□□□□ -0.13
PRKDC-207ENST00000536483 PDIA3P30101 505 aaKnown RBP14.26□□□□□ -0.13
PRKDC-207ENST00000536483 CLK2P49760 499 aaKnown RBP14.26□□□□□ -0.13
PRKDC-207ENST00000536483 APOBRQ0VD83 1088 aa14.26□□□□□ -0.13
PRKDC-207ENST00000536483 SEMA3FQ13275 785 aa14.26□□□□□ -0.13
PRKDC-207ENST00000536483 MKRN4PQ13434 485 aaPredicted RBP14.26□□□□□ -0.13
PRKDC-207ENST00000536483 PFKFB3Q16875 520 aaPredicted RBP14.26□□□□□ -0.13
PRKDC-207ENST00000536483 PLEKHG4Q58EX7 1191 aa14.26□□□□□ -0.13
PRKDC-207ENST00000536483 WWC2Q6AWC2 1192 aa14.26□□□□□ -0.13
PRKDC-207ENST00000536483 TYW1BQ6NUM6 668 aa14.26□□□□□ -0.13
PRKDC-207ENST00000536483 MYOCDQ8IZQ8 938 aa14.26□□□□□ -0.13
PRKDC-207ENST00000536483 ZNF274Q96GC6 653 aaPredicted RBP14.26□□□□□ -0.13
PRKDC-207ENST00000536483 C17orf80Q9BSJ5 609 aa14.26□□□□□ -0.13
PRKDC-207ENST00000536483 RNPEPQ9H4A4 650 aa14.26□□□□□ -0.13
PRKDC-207ENST00000536483 CYP46A1Q9Y6A2 500 aa14.26□□□□□ -0.13
PRKDC-207ENST00000536483 hCG_1642624A0A1W2PR95 340 aa14.25□□□□□ -0.13
PRKDC-207ENST00000536483 ESYT2A0FGR8 921 aa14.25□□□□□ -0.13
PRKDC-207ENST00000536483 STXBP3O00186 592 aa14.25□□□□□ -0.13
PRKDC-207ENST00000536483 NOP56O00567 594 aaKnown RBP14.25□□□□□ -0.13
PRKDC-207ENST00000536483 FOSP01100 380 aaPredicted RBP14.25□□□□□ -0.13
PRKDC-207ENST00000536483 IFNAR1P17181 557 aa14.25□□□□□ -0.13
PRKDC-207ENST00000536483 HOXC8P31273 242 aa14.25□□□□□ -0.13
PRKDC-207ENST00000536483 FGD1P98174 961 aa14.25□□□□□ -0.13
PRKDC-207ENST00000536483 TOB2Q14106 344 aaPredicted RBP14.25□□□□□ -0.13
PRKDC-207ENST00000536483 NEDD9Q14511 834 aa14.25□□□□□ -0.13
PRKDC-207ENST00000536483 HEATR3Q7Z4Q2 680 aa14.25□□□□□ -0.13
PRKDC-207ENST00000536483 KHSRPQ92945 711 aaKnown RBP eCLIP14.25□□□□□ -0.13
PRKDC-207ENST00000536483 GPRASP2Q96D09 838 aa14.25□□□□□ -0.13
PRKDC-207ENST00000536483 CDHR1Q96JP9 859 aa14.25□□□□□ -0.13
PRKDC-207ENST00000536483 OSBPL7Q9BZF2 842 aa14.25□□□□□ -0.13
PRKDC-207ENST00000536483 RTEL1Q9NZ71 1219 aa14.25□□□□□ -0.13
PRKDC-207ENST00000536483 UBIAD1Q9Y5Z9 338 aa14.25□□□□□ -0.13
PRKDC-207ENST00000536483 CTSHP09668 335 aa14.24□□□□□ -0.13
PRKDC-207ENST00000536483 PLA2G5P39877 138 aa14.24□□□□□ -0.13
PRKDC-207ENST00000536483 HTRA4P83105 476 aaPredicted RBP14.24□□□□□ -0.13
PRKDC-207ENST00000536483 PKN1Q16512 942 aa14.24□□□□□ -0.13
PRKDC-207ENST00000536483 MCTP2Q6DN12 878 aa14.24□□□□□ -0.13
PRKDC-207ENST00000536483 METTL7BQ6UX53 244 aa14.24□□□□□ -0.13
PRKDC-207ENST00000536483 CYFIP1Q7L576 1253 aa14.24□□□□□ -0.13
PRKDC-207ENST00000536483 GIMAP8Q8ND71 665 aaPredicted RBP14.24□□□□□ -0.13
PRKDC-207ENST00000536483 FBXO22Q8NEZ5 403 aa14.24□□□□□ -0.13
PRKDC-207ENST00000536483 FAM122AQ96E09 287 aa14.24□□□□□ -0.13
PRKDC-207ENST00000536483 LRFN3Q9BTN0 628 aa14.24□□□□□ -0.13
PRKDC-207ENST00000536483 RNF26Q9BY78 433 aaPredicted RBP14.24□□□□□ -0.13
PRKDC-207ENST00000536483 ZMYND12Q9H0C1 365 aa14.24□□□□□ -0.13
PRKDC-207ENST00000536483 UBE2ZQ9H832 354 aaPredicted RBP14.24□□□□□ -0.13
PRKDC-207ENST00000536483 SETD4Q9NVD3 440 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms