RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 RNPEPQ9H4A4 650 aa14.99□□□□□ -0.01
PRKDC-206ENST00000536429 IL23AQ9NPF7 189 aa14.99□□□□□ -0.01
PRKDC-206ENST00000536429 ORC3Q9UBD5 711 aaPredicted RBP14.99□□□□□ -0.01
PRKDC-206ENST00000536429 MYH7BA7E2Y1 1941 aa14.99□□□□□ -0.01
PRKDC-206ENST00000536429 DOCK5Q9H7D0 1870 aa14.99□□□□□ -0.01
PRKDC-206ENST00000536429 CDH23Q9H251 3354 aa14.99□□□□□ -0.01
PRKDC-206ENST00000536429 NFASCO94856 1347 aa14.98□□□□□ -0.01
PRKDC-206ENST00000536429 DHX15O43143 795 aaKnown RBP14.98□□□□□ -0.01
PRKDC-206ENST00000536429 CCNE2O96020 404 aa14.98□□□□□ -0.01
PRKDC-206ENST00000536429 MARK3P27448 753 aa14.98□□□□□ -0.01
PRKDC-206ENST00000536429 HOXC8P31273 242 aa14.98□□□□□ -0.01
PRKDC-206ENST00000536429 CIITAP33076 1130 aa14.98□□□□□ -0.01
PRKDC-206ENST00000536429 RBM25P49756 843 aaKnown RBP14.98□□□□□ -0.01
PRKDC-206ENST00000536429 ACTR2P61160 394 aa14.98□□□□□ -0.01
PRKDC-206ENST00000536429 GPNMBQ14956 572 aa14.98□□□□□ -0.01
PRKDC-206ENST00000536429 PRR16Q569H4 304 aa14.98□□□□□ -0.01
PRKDC-206ENST00000536429 MCTP2Q6DN12 878 aa14.98□□□□□ -0.01
PRKDC-206ENST00000536429 FAM109BQ6ICB4 259 aaPredicted RBP14.98□□□□□ -0.01
PRKDC-206ENST00000536429 NIPA1Q7RTP0 329 aa14.98□□□□□ -0.01
PRKDC-206ENST00000536429 DAGLBQ8NCG7 672 aa14.98□□□□□ -0.01
PRKDC-206ENST00000536429 OXER1Q8TDS5 423 aa14.98□□□□□ -0.01
PRKDC-206ENST00000536429 TBCKQ8TEA7 893 aa14.98□□□□□ -0.01
PRKDC-206ENST00000536429 SDF4Q9BRK5 362 aa14.98□□□□□ -0.01
PRKDC-206ENST00000536429 PHF20Q9BVI0 1012 aa14.98□□□□□ -0.01
PRKDC-206ENST00000536429 SETD4Q9NVD3 440 aa14.98□□□□□ -0.01
PRKDC-206ENST00000536429 SLC9A2Q9UBY0 812 aa14.98□□□□□ -0.01
PRKDC-206ENST00000536429 C17orf102A2RUQ5 167 aa14.97□□□□□ -0.01
PRKDC-206ENST00000536429 TREHO43280 583 aa14.97□□□□□ -0.01
PRKDC-206ENST00000536429 IQCF3P0C7M6 154 aa14.97□□□□□ -0.01
PRKDC-206ENST00000536429 FOSBP53539 338 aa14.97□□□□□ -0.01
PRKDC-206ENST00000536429 TRAF7Q6Q0C0 670 aa14.97□□□□□ -0.01
PRKDC-206ENST00000536429 DEFB128Q7Z7B8 93 aa14.97□□□□□ -0.01
PRKDC-206ENST00000536429 GJA10Q969M2 543 aa14.97□□□□□ -0.01
PRKDC-206ENST00000536429 CXXC1Q9P0U4 656 aaPredicted RBP14.97□□□□□ -0.01
PRKDC-206ENST00000536429 IPO5O00410 1097 aaKnown RBP14.96□□□□□ -0.01
PRKDC-206ENST00000536429 PITPNM1O00562 1244 aa14.96□□□□□ -0.01
PRKDC-206ENST00000536429 LGR5O75473 907 aa14.96□□□□□ -0.01
PRKDC-206ENST00000536429 TDP2O95551 362 aa14.96□□□□□ -0.01
PRKDC-206ENST00000536429 CKBP12277 381 aa14.96□□□□□ -0.01
PRKDC-206ENST00000536429 PTK7Q13308 1070 aa14.96□□□□□ -0.01
PRKDC-206ENST00000536429 BFSP2Q13515 415 aa14.96□□□□□ -0.01
PRKDC-206ENST00000536429 EARS2Q5JPH6 523 aaKnown RBP14.96□□□□□ -0.01
PRKDC-206ENST00000536429 RASIP1Q5U651 963 aa14.96□□□□□ -0.01
PRKDC-206ENST00000536429 PSRC1Q6PGN9 363 aaPredicted RBP14.96□□□□□ -0.01
PRKDC-206ENST00000536429 Q7L0L9 218 aa14.96□□□□□ -0.01
PRKDC-206ENST00000536429 OTOP2Q7RTS6 562 aa14.96□□□□□ -0.01
PRKDC-206ENST00000536429 CCDC83Q8IWF9 413 aa14.96□□□□□ -0.01
PRKDC-206ENST00000536429 CAGE1Q8TC20 777 aa14.96□□□□□ -0.01
PRKDC-206ENST00000536429 ZBTB10Q96DT7 871 aa14.96□□□□□ -0.01
PRKDC-206ENST00000536429 ZNF577Q9BSK1 485 aa14.96□□□□□ -0.01
PRKDC-206ENST00000536429 ZNF215Q9UL58 517 aaPredicted RBP14.96□□□□□ -0.01
PRKDC-206ENST00000536429 LIMCH1Q9UPQ0 1083 aa14.96□□□□□ -0.01
PRKDC-206ENST00000536429 GRXCR1A8MXD5 290 aa14.95□□□□□ -0.02
PRKDC-206ENST00000536429 MSH4O15457 936 aa14.95□□□□□ -0.02
PRKDC-206ENST00000536429 ATG7O95352 703 aa14.95□□□□□ -0.02
PRKDC-206ENST00000536429 ADAM17P78536 824 aa14.95□□□□□ -0.02
PRKDC-206ENST00000536429 SETQ01105 290 aaPredicted RBP14.95□□□□□ -0.02
PRKDC-206ENST00000536429 RBL2Q08999 1139 aa14.95□□□□□ -0.02
PRKDC-206ENST00000536429 MBTPS1Q14703 1052 aa14.95□□□□□ -0.02
PRKDC-206ENST00000536429 INF2Q27J81 1249 aa14.95□□□□□ -0.02
PRKDC-206ENST00000536429 TCTN1Q2MV58 587 aa14.95□□□□□ -0.02
PRKDC-206ENST00000536429 ZNF618Q5T7W0 954 aa14.95□□□□□ -0.02
PRKDC-206ENST00000536429 GALNT17Q6IS24 598 aa14.95□□□□□ -0.02
PRKDC-206ENST00000536429 SERINC5Q86VE9 423 aa14.95□□□□□ -0.02
PRKDC-206ENST00000536429 RETREG2Q8NC44 543 aa14.95□□□□□ -0.02
PRKDC-206ENST00000536429 LMBR1Q8WVP7 490 aa14.95□□□□□ -0.02
PRKDC-206ENST00000536429 HERVK_113Q902F9 699 aa14.95□□□□□ -0.02
PRKDC-206ENST00000536429 GLG1Q92896 1179 aa14.95□□□□□ -0.02
PRKDC-206ENST00000536429 ATP6V0A1Q93050 837 aa14.95□□□□□ -0.02
PRKDC-206ENST00000536429 EMSYQ7Z589 1322 aa14.94□□□□□ -0.02
PRKDC-206ENST00000536429 FAM205CA6NFA0 338 aa14.94□□□□□ -0.02
PRKDC-206ENST00000536429 NBNO60934 754 aa14.94□□□□□ -0.02
PRKDC-206ENST00000536429 FGBP02675 491 aa14.94□□□□□ -0.02
PRKDC-206ENST00000536429 SELPP16109 830 aa14.94□□□□□ -0.02
PRKDC-206ENST00000536429 USP11P51784 963 aa14.94□□□□□ -0.02
PRKDC-206ENST00000536429 PPFIA1Q13136 1202 aa14.94□□□□□ -0.02
PRKDC-206ENST00000536429 NR5A1Q13285 461 aa14.94□□□□□ -0.02
PRKDC-206ENST00000536429 ABHD15Q6UXT9 468 aa14.94□□□□□ -0.02
PRKDC-206ENST00000536429 RUFY4Q6ZNE9 571 aa14.94□□□□□ -0.02
PRKDC-206ENST00000536429 LRRC8DQ7L1W4 858 aa14.94□□□□□ -0.02
PRKDC-206ENST00000536429 CCDC60Q8IWA6 550 aaPredicted RBP14.94□□□□□ -0.02
PRKDC-206ENST00000536429 FAM177A1Q8N128 213 aaPredicted RBP14.94□□□□□ -0.02
PRKDC-206ENST00000536429 AFAP1L1Q8TED9 768 aa14.94□□□□□ -0.02
PRKDC-206ENST00000536429 OSBPL7Q9BZF2 842 aa14.94□□□□□ -0.02
PRKDC-206ENST00000536429 SMARCAD1Q9H4L7 1026 aa14.94□□□□□ -0.02
PRKDC-206ENST00000536429 ERAP1Q9NZ08 941 aa14.94□□□□□ -0.02
PRKDC-206ENST00000536429 IGKV6D-21A0A0A0MT36 114 aa14.93□□□□□ -0.02
PRKDC-206ENST00000536429 CD2BP2O95400 341 aaKnown RBP14.93□□□□□ -0.02
PRKDC-206ENST00000536429 THPOP40225 353 aa14.93□□□□□ -0.02
PRKDC-206ENST00000536429 PLCB4Q15147 1175 aa14.93□□□□□ -0.02
PRKDC-206ENST00000536429 NONOQ15233 471 aaKnown RBP eCLIP14.93□□□□□ -0.02
PRKDC-206ENST00000536429 GRIK4Q16099 956 aa14.93□□□□□ -0.02
PRKDC-206ENST00000536429 MARCH8Q5T0T0 291 aa14.93□□□□□ -0.02
PRKDC-206ENST00000536429 PIK3AP1Q6ZUJ8 805 aa14.93□□□□□ -0.02
PRKDC-206ENST00000536429 KRT25Q7Z3Z0 450 aa14.93□□□□□ -0.02
PRKDC-206ENST00000536429 RPUSD2Q8IZ73 545 aaKnown RBP14.93□□□□□ -0.02
PRKDC-206ENST00000536429 CCDC155Q8N6L0 562 aa14.93□□□□□ -0.02
PRKDC-206ENST00000536429 WASF1Q92558 559 aa14.93□□□□□ -0.02
PRKDC-206ENST00000536429 MBOAT7Q96N66 472 aa14.93□□□□□ -0.02
PRKDC-206ENST00000536429 GTF3C3Q9Y5Q9 886 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms