RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 POLR2FP61218 127 aaKnown RBP14.51□□□□□ -0.09
LDLR-203ENST00000535915 RASSF7Q02833 373 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 ADAM9Q13443 819 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 ARSHQ5FYA8 562 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 STRIP1Q5VSL9 837 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 SFMBT2Q5VUG0 894 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 HGSNATQ68CP4 663 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 MOXD1Q6UVY6 613 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 CATSPER3Q86XQ3 398 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 CREG2Q8IUH2 290 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 EXOC4Q96A65 974 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 P2RX7Q99572 595 aaKnown RBP14.51□□□□□ -0.09
LDLR-203ENST00000535915 NUCKS1Q9H1E3 243 aaKnown RBP14.51□□□□□ -0.09
LDLR-203ENST00000535915 KCTD10Q9H3F6 313 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 MEIS1O00470 390 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 NOL4O94818 638 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 ABCB5Q2M3G0 1257 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 ASTE1Q2TB18 679 aaPredicted RBP14.51□□□□□ -0.09
LDLR-203ENST00000535915 CCDC70Q6NSX1 233 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 TATDN1Q6P1N9 297 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 FBXO11Q86XK2 927 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 TRIM59Q8IWR1 403 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 ERMNQ8TAM6 284 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 ETNPPLQ8TBG4 499 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 PSMB7Q99436 277 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 PITPNM2Q9BZ72 1349 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 PJA2O43164 708 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 NAP1L1P55209 391 aaKnown RBP14.51□□□□□ -0.09
LDLR-203ENST00000535915 MARSP56192 900 aaKnown RBP14.51□□□□□ -0.09
LDLR-203ENST00000535915 SPIRE1Q08AE8 756 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 DACT2Q5SW24 774 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 ARHGAP27Q6ZUM4 889 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 COG1Q8WTW3 980 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 CRYGNQ8WXF5 182 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 TRERF1Q96PN7 1200 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 MRIQ9BWK5 157 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 ZNF219Q9P2Y4 722 aaPredicted RBP14.51□□□□□ -0.09
LDLR-203ENST00000535915 FAN1Q9Y2M0 1017 aa14.51□□□□□ -0.09
LDLR-203ENST00000535915 SLX4Q8IY92 1834 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 ECE2O60344 883 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 SERPING1P05155 500 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 LMAN1P49257 510 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 PSMC6P62333 389 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 PABPC4Q13310 644 aaKnown RBP eCLIP14.5□□□□□ -0.09
LDLR-203ENST00000535915 NFRKBQ6P4R8 1299 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 OSBPL9Q96SU4 736 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 SALL4Q9UJQ4 1053 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 FAM184BQ9ULE4 1060 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 DNM3Q9UQ16 869 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 ZNF646O15015 1829 aaPredicted RBP14.5□□□□□ -0.09
LDLR-203ENST00000535915 FRMD3A2A2Y4 597 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 CETN3O15182 167 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 BUB1O43683 1085 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 PHACTR2O75167 634 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 NDUFB10O96000 172 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 PRLRP16471 622 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 HMGB2P26583 209 aaKnown RBP14.5□□□□□ -0.09
LDLR-203ENST00000535915 CXCR5P32302 372 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 APBA1Q02410 837 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 MCTP2Q6DN12 878 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 PPP4R3CPQ6ZMV5 832 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 PAXIP1Q6ZW49 1069 aaPredicted RBP14.5□□□□□ -0.09
LDLR-203ENST00000535915 SYN2Q92777 582 aaPredicted RBP14.5□□□□□ -0.09
LDLR-203ENST00000535915 HYOU1Q9Y4L1 999 aa14.5□□□□□ -0.09
LDLR-203ENST00000535915 KIF13BQ9NQT8 1826 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 FAM86B1E9PN63 330 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 TBX3O15119 743 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 TLR2O60603 784 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 FAM86B2P0C5J1 330 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 TAL1P17542 331 aaPredicted RBP14.49□□□□□ -0.09
LDLR-203ENST00000535915 TCP1P17987 556 aaKnown RBP14.49□□□□□ -0.09
LDLR-203ENST00000535915 NR2F2P24468 414 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 HSPA1LP34931 641 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 CASP5P51878 434 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 HDLBPQ00341 1268 aaKnown RBP14.49□□□□□ -0.09
LDLR-203ENST00000535915 ARID5AQ03989 594 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 RAPGEF1Q13905 1077 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 Q4G0T1 1027 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 CCDC181Q5TID7 509 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 SYDE2Q5VT97 1194 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 GMCL1P1Q8NEA9 526 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 FAM71BQ8TC56 605 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 GDAP1L1Q96MZ0 367 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 NOX5Q96PH1 765 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 VIPAS39Q9H9C1 493 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 NCK2O43639 380 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 FOSP01100 380 aaPredicted RBP14.49□□□□□ -0.09
LDLR-203ENST00000535915 CAPN2P17655 700 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 RPA1P27694 616 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 GIT2Q14161 759 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 EDRF1Q3B7T1 1238 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 MSL1Q68DK7 614 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 GSPT2Q8IYD1 628 aaKnown RBP14.49□□□□□ -0.09
LDLR-203ENST00000535915 GMCL1Q96IK5 515 aa14.49□□□□□ -0.09
LDLR-203ENST00000535915 RBAK-RBAKDNI3L0D1 243 aa14.48□□□□□ -0.09
LDLR-203ENST00000535915 SPATA31C1P0DKV0 1188 aa14.48□□□□□ -0.09
LDLR-203ENST00000535915 BMP3P12645 472 aa14.48□□□□□ -0.09
LDLR-203ENST00000535915 HOXA13P31271 388 aaPredicted RBP14.48□□□□□ -0.09
LDLR-203ENST00000535915 SREBF1P36956 1147 aa14.48□□□□□ -0.09
LDLR-203ENST00000535915 MATR3P43243 847 aaKnown RBP eCLIP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms