RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 CEP55Q53EZ4 464 aa18.71■□□□□ 0.59
ATL3-202ENST00000535789 UTP14CQ5TAP6 766 aaKnown RBP18.71■□□□□ 0.59
ATL3-202ENST00000535789 OTOP2Q7RTS6 562 aa18.71■□□□□ 0.59
ATL3-202ENST00000535789 DEFB128Q7Z7B8 93 aa18.71■□□□□ 0.59
ATL3-202ENST00000535789 REXO1Q8N1G1 1221 aaKnown RBP18.71■□□□□ 0.59
ATL3-202ENST00000535789 CDHR1Q96JP9 859 aa18.71■□□□□ 0.59
ATL3-202ENST00000535789 EHMT1Q9H9B1 1298 aa18.71■□□□□ 0.59
ATL3-202ENST00000535789 AGO4Q9HCK5 861 aaKnown RBP18.71■□□□□ 0.59
ATL3-202ENST00000535789 M0R2N6 131 aa18.7■□□□□ 0.58
ATL3-202ENST00000535789 PFKFB2O60825 505 aa18.7■□□□□ 0.58
ATL3-202ENST00000535789 CYP3A4P08684 503 aa18.7■□□□□ 0.58
ATL3-202ENST00000535789 CKBP12277 381 aa18.7■□□□□ 0.58
ATL3-202ENST00000535789 ADAM17P78536 824 aa18.7■□□□□ 0.58
ATL3-202ENST00000535789 PTK7Q13308 1070 aa18.7■□□□□ 0.58
ATL3-202ENST00000535789 SERINC5Q86VE9 423 aa18.7■□□□□ 0.58
ATL3-202ENST00000535789 CAGE1Q8TC20 777 aa18.7■□□□□ 0.58
ATL3-202ENST00000535789 LENG9Q96B70 501 aa18.7■□□□□ 0.58
ATL3-202ENST00000535789 FAM161BQ96MY7 647 aa18.7■□□□□ 0.58
ATL3-202ENST00000535789 OSBPL7Q9BZF2 842 aa18.7■□□□□ 0.58
ATL3-202ENST00000535789 GLT8D2Q9H1C3 349 aa18.7■□□□□ 0.58
ATL3-202ENST00000535789 RNPEPQ9H4A4 650 aa18.7■□□□□ 0.58
ATL3-202ENST00000535789 C6orf50Q9HD87 102 aa18.7■□□□□ 0.58
ATL3-202ENST00000535789 NOD1Q9Y239 953 aa18.7■□□□□ 0.58
ATL3-202ENST00000535789 NFASCO94856 1347 aa18.7■□□□□ 0.58
ATL3-202ENST00000535789 NLRC5Q86WI3 1866 aa18.69■□□□□ 0.58
ATL3-202ENST00000535789 TREHO43280 583 aa18.69■□□□□ 0.58
ATL3-202ENST00000535789 NBNO60934 754 aa18.69■□□□□ 0.58
ATL3-202ENST00000535789 CCNE2O96020 404 aa18.69■□□□□ 0.58
ATL3-202ENST00000535789 FGBP02675 491 aa18.69■□□□□ 0.58
ATL3-202ENST00000535789 BFSP2Q13515 415 aa18.69■□□□□ 0.58
ATL3-202ENST00000535789 LRRC8DQ7L1W4 858 aa18.69■□□□□ 0.58
ATL3-202ENST00000535789 GIMAP8Q8ND71 665 aaPredicted RBP18.69■□□□□ 0.58
ATL3-202ENST00000535789 AFAP1L1Q8TED9 768 aa18.69■□□□□ 0.58
ATL3-202ENST00000535789 CCDC12Q8WUD4 166 aaPredicted RBP18.69■□□□□ 0.58
ATL3-202ENST00000535789 LMBR1Q8WVP7 490 aa18.69■□□□□ 0.58
ATL3-202ENST00000535789 UIMC1Q96RL1 719 aa18.69■□□□□ 0.58
ATL3-202ENST00000535789 JPH1Q9HDC5 661 aaPredicted RBP18.69■□□□□ 0.58
ATL3-202ENST00000535789 GJB4Q9NTQ9 266 aa18.69■□□□□ 0.58
ATL3-202ENST00000535789 EMSYQ7Z589 1322 aa18.69■□□□□ 0.58
ATL3-202ENST00000535789 ARID2Q68CP9 1835 aa18.68■□□□□ 0.58
ATL3-202ENST00000535789 MAFGO15525 162 aa18.68■□□□□ 0.58
ATL3-202ENST00000535789 DHX15O43143 795 aaKnown RBP18.68■□□□□ 0.58
ATL3-202ENST00000535789 LGR5O75473 907 aa18.68■□□□□ 0.58
ATL3-202ENST00000535789 DEXIO95424 95 aa18.68■□□□□ 0.58
ATL3-202ENST00000535789 DNAJB2P25686 324 aa18.68■□□□□ 0.58
ATL3-202ENST00000535789 AKAP17AQ02040 695 aaKnown RBP18.68■□□□□ 0.58
ATL3-202ENST00000535789 SSRP1Q08945 709 aaKnown RBP18.68■□□□□ 0.58
ATL3-202ENST00000535789 ME3Q16798 604 aa18.68■□□□□ 0.58
ATL3-202ENST00000535789 ZNF618Q5T7W0 954 aa18.68■□□□□ 0.58
ATL3-202ENST00000535789 CCDC148Q8NFR7 591 aa18.68■□□□□ 0.58
ATL3-202ENST00000535789 KIF2CQ99661 725 aa18.68■□□□□ 0.58
ATL3-202ENST00000535789 PBX4Q9BYU1 374 aa18.68■□□□□ 0.58
ATL3-202ENST00000535789 SH3GLB2Q9NR46 395 aa18.68■□□□□ 0.58
ATL3-202ENST00000535789 SETD4Q9NVD3 440 aa18.68■□□□□ 0.58
ATL3-202ENST00000535789 SLC9A2Q9UBY0 812 aa18.68■□□□□ 0.58
ATL3-202ENST00000535789 STK36Q9NRP7 1315 aa18.68■□□□□ 0.58
ATL3-202ENST00000535789 ATG2AQ2TAZ0 1938 aa18.67■□□□□ 0.58
ATL3-202ENST00000535789 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.67■□□□□ 0.58
ATL3-202ENST00000535789 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.67■□□□□ 0.58
ATL3-202ENST00000535789 C17orf102A2RUQ5 167 aa18.67■□□□□ 0.58
ATL3-202ENST00000535789 SELPP16109 830 aa18.67■□□□□ 0.58
ATL3-202ENST00000535789 MARK3P27448 753 aa18.67■□□□□ 0.58
ATL3-202ENST00000535789 RFC2P35250 354 aa18.67■□□□□ 0.58
ATL3-202ENST00000535789 NIPA1Q7RTP0 329 aa18.67■□□□□ 0.58
ATL3-202ENST00000535789 SEPT1Q8WYJ6 367 aa18.67■□□□□ 0.58
ATL3-202ENST00000535789 KIAA1671Q9BY89 1806 aa18.66■□□□□ 0.58
ATL3-202ENST00000535789 DDX39AO00148 427 aaKnown RBP18.66■□□□□ 0.58
ATL3-202ENST00000535789 CPLX1O14810 134 aa18.66■□□□□ 0.58
ATL3-202ENST00000535789 CXCL10P02778 98 aa18.66■□□□□ 0.58
ATL3-202ENST00000535789 PFKMP08237 780 aa18.66■□□□□ 0.58
ATL3-202ENST00000535789 GNA11P29992 359 aa18.66■□□□□ 0.58
ATL3-202ENST00000535789 ACTR2P61160 394 aa18.66■□□□□ 0.58
ATL3-202ENST00000535789 ZNF697Q5TEC3 545 aa18.66■□□□□ 0.58
ATL3-202ENST00000535789 PLA2G4DQ86XP0 818 aa18.66■□□□□ 0.58
ATL3-202ENST00000535789 TRIM22Q8IYM9 498 aa18.66■□□□□ 0.58
ATL3-202ENST00000535789 RPUSD2Q8IZ73 545 aaKnown RBP18.66■□□□□ 0.58
ATL3-202ENST00000535789 CCDC155Q8N6L0 562 aa18.66■□□□□ 0.58
ATL3-202ENST00000535789 NECAB1Q8N987 351 aa18.66■□□□□ 0.58
ATL3-202ENST00000535789 DAGLBQ8NCG7 672 aa18.66■□□□□ 0.58
ATL3-202ENST00000535789 ATP6V0A1Q93050 837 aa18.66■□□□□ 0.58
ATL3-202ENST00000535789 ZBTB10Q96DT7 871 aa18.66■□□□□ 0.58
ATL3-202ENST00000535789 SLKQ9H2G2 1235 aaPredicted RBP18.66■□□□□ 0.58
ATL3-202ENST00000535789 ZNF215Q9UL58 517 aaPredicted RBP18.66■□□□□ 0.58
ATL3-202ENST00000535789 YBX2Q9Y2T7 364 aaKnown RBP18.66■□□□□ 0.58
ATL3-202ENST00000535789 ATG7O95352 703 aa18.65■□□□□ 0.58
ATL3-202ENST00000535789 FDPSP14324 419 aaKnown RBP18.65■□□□□ 0.58
ATL3-202ENST00000535789 CIITAP33076 1130 aa18.65■□□□□ 0.58
ATL3-202ENST00000535789 MARCH8Q5T0T0 291 aa18.65■□□□□ 0.58
ATL3-202ENST00000535789 RUFY4Q6ZNE9 571 aa18.65■□□□□ 0.58
ATL3-202ENST00000535789 RETREG2Q8NC44 543 aa18.65■□□□□ 0.58
ATL3-202ENST00000535789 GTF3C6Q969F1 213 aa18.65■□□□□ 0.58
ATL3-202ENST00000535789 SEMA6BQ9H3T3 888 aa18.65■□□□□ 0.58
ATL3-202ENST00000535789 PCDHA4Q9UN74 947 aa18.65■□□□□ 0.58
ATL3-202ENST00000535789 KCNJ14Q9UNX9 436 aa18.65■□□□□ 0.58
ATL3-202ENST00000535789 IGKV6D-21A0A0A0MT36 114 aa18.64■□□□□ 0.57
ATL3-202ENST00000535789 EIF5BO60841 1220 aaKnown RBP18.64■□□□□ 0.57
ATL3-202ENST00000535789 RABGGTBP53611 331 aa18.64■□□□□ 0.57
ATL3-202ENST00000535789 NLRP5P59047 1200 aa18.64■□□□□ 0.57
ATL3-202ENST00000535789 MKRN4PQ13434 485 aaPredicted RBP18.64■□□□□ 0.57
ATL3-202ENST00000535789 CCDC60Q8IWA6 550 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms