RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 HGSO14964 777 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-202ENST00000535689 ZEB2O60315 1214 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 BRINP1O60477 761 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 USP2O75604 605 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-202ENST00000535689 FUCA1P04066 466 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 RNASE1P07998 156 aaKnown RBP4.49□□□□□ -1.69
SNHG1-202ENST00000535689 GLI1P08151 1106 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 C6orf222P0C671 652 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-202ENST00000535689 BCL6P41182 706 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 RBM6P78332 1123 aaKnown RBP4.49□□□□□ -1.69
SNHG1-202ENST00000535689 SF1Q15637 639 aaKnown RBP4.49□□□□□ -1.69
SNHG1-202ENST00000535689 ZNF174Q15697 407 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 FOXB2Q5VYV0 432 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 CNNM4Q6P4Q7 775 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 Q8N1Y9 231 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 C2orf69Q8N8R5 385 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 USP7Q93009 1102 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 E2F7Q96AV8 911 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 JMJD8Q96S16 334 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 ORAI3Q9BRQ5 295 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 YIPF4Q9BSR8 244 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 SMOC1Q9H4F8 434 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.49□□□□□ -1.69
SNHG1-202ENST00000535689 SLC6A20Q9NP91 592 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 BTG4Q9NY30 223 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 IMPACTQ9P2X3 320 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 NOP58Q9Y2X3 529 aaKnown RBP4.49□□□□□ -1.69
SNHG1-202ENST00000535689 ABCC1P33527 1531 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 SETD1AO15047 1707 aaKnown RBP4.49□□□□□ -1.69
SNHG1-202ENST00000535689 PHLPP1O60346 1717 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 CDC42BPAQ5VT25 1732 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 CCDC18Q5T9S5 1454 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 ATP7AQ04656 1500 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 TCRBV16S1A1N1A0A5B0 115 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 PDE8AO60658 829 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 PDE6BP35913 854 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 MASP1P48740 699 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 GPR19Q15760 415 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 NTRK3Q16288 839 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 PTPROQ16827 1216 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 ZCCHC8Q6NZY4 707 aaKnown RBP4.48□□□□□ -1.69
SNHG1-202ENST00000535689 MPZL3Q6UWV2 235 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 NLRX1Q86UT6 975 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 ZSWIM9Q86XI8 627 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 DHX37Q8IY37 1157 aaKnown RBP4.48□□□□□ -1.69
SNHG1-202ENST00000535689 ZZZ3Q8IYH5 903 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 TMEM52Q8NDY8 209 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 SLC7A14Q8TBB6 771 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 LGR4Q9BXB1 951 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 TRIM39Q9HCM9 518 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 MBNL3Q9NUK0 354 aaKnown RBP4.48□□□□□ -1.69
SNHG1-202ENST00000535689 GULP1Q9UBP9 304 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 YBX2Q9Y2T7 364 aaKnown RBP4.48□□□□□ -1.69
SNHG1-202ENST00000535689 PCDHA9Q9Y5H5 950 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 PCDHA8Q9Y5H6 950 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 MSH6P52701 1360 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 PZPP20742 1482 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 NEURL4Q96JN8 1562 aa4.48□□□□□ -1.69
SNHG1-202ENST00000535689 FGD6Q6ZV73 1430 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 KRTAP9-6A0A140TA67 174 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 SLC12A8A0AV02 714 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 ALG1L2C9J202 215 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 CYP7B1O75881 506 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 VIL1P09327 827 aaKnown RBP4.47□□□□□ -1.69
SNHG1-202ENST00000535689 JMJD7P0C870 316 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 HSP90B1P14625 803 aaKnown RBP4.47□□□□□ -1.69
SNHG1-202ENST00000535689 CD96P40200 585 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 STAT3P40763 770 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 MAPKAPK2P49137 400 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 ERVFRD-1P60508 538 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 LACTBP83111 547 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-202ENST00000535689 DHCR24Q15392 516 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 TARBP2Q15633 366 aaKnown RBP4.47□□□□□ -1.69
SNHG1-202ENST00000535689 STEAP3Q658P3 488 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 CDCA2Q69YH5 1023 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-202ENST00000535689 ZC3H14Q6PJT7 736 aaKnown RBP4.47□□□□□ -1.69
SNHG1-202ENST00000535689 KCNT2Q6UVM3 1135 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 ZPBP2Q6X784 338 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 OTOP3Q7RTS5 596 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 ZC3H18Q86VM9 953 aaKnown RBP4.47□□□□□ -1.69
SNHG1-202ENST00000535689 NME9Q86XW9 330 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 LRRC59Q96AG4 307 aaKnown RBP4.47□□□□□ -1.69
SNHG1-202ENST00000535689 INTS4Q96HW7 963 aaKnown RBP4.47□□□□□ -1.69
SNHG1-202ENST00000535689 PUS7Q96PZ0 661 aaKnown RBP4.47□□□□□ -1.69
SNHG1-202ENST00000535689 TTC1Q99614 292 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 SAMD15Q9P1V8 674 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 KCNG1Q9UIX4 513 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 ZNF652Q9Y2D9 606 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 RWDD3Q9Y3V2 267 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 TRAF6Q9Y4K3 522 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 ROBO1Q9Y6N7 1651 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 STRCP1A6NGW2 1772 aa4.47□□□□□ -1.69
SNHG1-202ENST00000535689 NCOA3Q9Y6Q9 1424 aa4.46□□□□□ -1.69
SNHG1-202ENST00000535689 ABCC3O15438 1527 aa4.46□□□□□ -1.69
SNHG1-202ENST00000535689 ALKQ9UM73 1620 aa4.46□□□□□ -1.69
SNHG1-202ENST00000535689 XIRP1Q702N8 1843 aaKnown RBP4.46□□□□□ -1.69
SNHG1-202ENST00000535689 CCNB3Q8WWL7 1395 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 CCDC66A2RUB6 948 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 H7C1D1 291 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 IRS4O14654 1257 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms