RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 ZNF384Q8TF68 577 aa17.39■□□□□ 0.37
MCF2L-232ENST00000535094 CTNNBL1Q8WYA6 563 aaPredicted RBP17.39■□□□□ 0.37
MCF2L-232ENST00000535094 CYFIP2Q96F07 1278 aa17.39■□□□□ 0.37
MCF2L-232ENST00000535094 MLXIPLQ9NP71 852 aa17.39■□□□□ 0.37
MCF2L-232ENST00000535094 CEP72Q9P209 647 aa17.39■□□□□ 0.37
MCF2L-232ENST00000535094 SIK3Q9Y2K2 1263 aa17.39■□□□□ 0.37
MCF2L-232ENST00000535094 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.39■□□□□ 0.37
MCF2L-232ENST00000535094 XRCC5P13010 732 aaKnown RBP17.38■□□□□ 0.37
MCF2L-232ENST00000535094 CDK8P49336 464 aa17.38■□□□□ 0.37
MCF2L-232ENST00000535094 RBM5P52756 815 aaKnown RBP eCLIP17.38■□□□□ 0.372e-6■■■■□ 22.7
MCF2L-232ENST00000535094 SNCBQ16143 134 aa17.38■□□□□ 0.37
MCF2L-232ENST00000535094 GLE1Q53GS7 698 aaKnown RBP17.38■□□□□ 0.37
MCF2L-232ENST00000535094 GOLGA6L10A0A0M3HER8 536 aa17.38■□□□□ 0.37
MCF2L-232ENST00000535094 SPDYE3A6NKU9 549 aa17.38■□□□□ 0.37
MCF2L-232ENST00000535094 EIF4E1BA6NMX2 242 aaKnown RBP17.38■□□□□ 0.37
MCF2L-232ENST00000535094 RIMBP2O15034 1052 aa17.38■□□□□ 0.37
MCF2L-232ENST00000535094 ITGA4P13612 1032 aa17.38■□□□□ 0.37
MCF2L-232ENST00000535094 FAM182BQ5T319 152 aa17.38■□□□□ 0.37
MCF2L-232ENST00000535094 RNF10Q8N5U6 811 aaKnown RBP17.38■□□□□ 0.37
MCF2L-232ENST00000535094 ANKS4BQ8N8V4 417 aa17.38■□□□□ 0.37
MCF2L-232ENST00000535094 RAD54LQ92698 747 aa17.38■□□□□ 0.37
MCF2L-232ENST00000535094 CAMTA2O94983 1202 aa17.38■□□□□ 0.37
MCF2L-232ENST00000535094 SNAP25P60880 206 aa17.38■□□□□ 0.37
MCF2L-232ENST00000535094 GJB7Q6PEY0 223 aa17.38■□□□□ 0.37
MCF2L-232ENST00000535094 HDAC9Q9UKV0 1011 aa17.38■□□□□ 0.37
MCF2L-232ENST00000535094 STK38LQ9Y2H1 464 aa17.38■□□□□ 0.37
MCF2L-232ENST00000535094 GRIN2DO15399 1336 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 A0A1W2PQJ5 194 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 USP17L15C9J2P7 530 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 USP17L13C9JLJ4 530 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 USP17L11C9JVI0 530 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 USP17L18D6R9N7 530 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 USP17L22D6RA61 530 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 USP17L17D6RBQ6 530 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 USP17L19D6RCP7 530 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 USP17L20D6RJB6 530 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 PTK2Q05397 1052 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 USP17L24Q0WX57 530 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 SLC18A3Q16572 532 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 USH1GQ495M9 461 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 USP17L6PQ6QN14 398 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 DPP8Q6V1X1 898 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-232ENST00000535094 LMBR1Q8WVP7 490 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 PTPN22Q9Y2R2 807 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 SNX24Q9Y343 169 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 NOC2LQ9Y3T9 749 aaKnown RBP17.37■□□□□ 0.37
MCF2L-232ENST00000535094 KCNQ2O43526 872 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 LRRN2O75325 713 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 PRR16Q569H4 304 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 ANKRD42Q8N9B4 389 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 IQCDQ96DY2 449 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 NUCKS1Q9H1E3 243 aaKnown RBP17.37■□□□□ 0.37
MCF2L-232ENST00000535094 DNAJC17Q9NVM6 304 aaKnown RBP17.37■□□□□ 0.37
MCF2L-232ENST00000535094 SAMD15Q9P1V8 674 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 STK17AQ9UEE5 414 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 CHUKO15111 745 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 GNPATO15228 680 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 PDHBP11177 359 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 ERVK-9P63128 1117 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 CDC37Q16543 378 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-232ENST00000535094 CCDC38Q502W7 563 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 OTUD6AQ7L8S5 288 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 TBC1D1Q86TI0 1168 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-232ENST00000535094 RIC8AQ9NPQ8 531 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 CHORDC1Q9UHD1 332 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-232ENST00000535094 AMFRQ9UKV5 643 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 SLIT3O75094 1523 aa17.37■□□□□ 0.37
MCF2L-232ENST00000535094 PLA2G4BP0C869 781 aa17.36■□□□□ 0.37
MCF2L-232ENST00000535094 GSTO1P78417 241 aa17.36■□□□□ 0.37
MCF2L-232ENST00000535094 ITPK1Q13572 414 aa17.36■□□□□ 0.37
MCF2L-232ENST00000535094 TPTE2Q6XPS3 522 aa17.36■□□□□ 0.37
MCF2L-232ENST00000535094 USP38Q8NB14 1042 aa17.36■□□□□ 0.37
MCF2L-232ENST00000535094 ANKRD2Q9GZV1 360 aa17.36■□□□□ 0.37
MCF2L-232ENST00000535094 POTEFA5A3E0 1075 aa17.36■□□□□ 0.37
MCF2L-232ENST00000535094 POTEIP0CG38 1075 aa17.36■□□□□ 0.37
MCF2L-232ENST00000535094 MRPL12P52815 198 aaKnown RBP17.36■□□□□ 0.37
MCF2L-232ENST00000535094 POTEGQ6S5H5 508 aa17.36■□□□□ 0.37
MCF2L-232ENST00000535094 POTEEQ6S8J3 1075 aa17.36■□□□□ 0.37
MCF2L-232ENST00000535094 ANKS1AQ92625 1134 aa17.36■□□□□ 0.37
MCF2L-232ENST00000535094 SH3GL2Q99962 352 aa17.36■□□□□ 0.37
MCF2L-232ENST00000535094 SLC40A1Q9NP59 571 aa17.36■□□□□ 0.37
MCF2L-232ENST00000535094 RNF14Q9UBS8 474 aa17.36■□□□□ 0.37
MCF2L-232ENST00000535094 ZC3H4Q9UPT8 1303 aaKnown RBP17.36■□□□□ 0.37
MCF2L-232ENST00000535094 RGS16O15492 202 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-232ENST00000535094 SHOX2O60902 331 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-232ENST00000535094 KIF4AO95239 1232 aa17.36■□□□□ 0.37
MCF2L-232ENST00000535094 SSR1P43307 286 aaKnown RBP17.36■□□□□ 0.37
MCF2L-232ENST00000535094 VPS41P49754 854 aa17.36■□□□□ 0.37
MCF2L-232ENST00000535094 TBC1D10BQ4KMP7 808 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-232ENST00000535094 ELAC2Q9BQ52 826 aaKnown RBP17.36■□□□□ 0.37
MCF2L-232ENST00000535094 PSTPIP2Q9H939 334 aa17.36■□□□□ 0.37
MCF2L-232ENST00000535094 BLOC1S4Q9NUP1 217 aa17.36■□□□□ 0.37
MCF2L-232ENST00000535094 PRPHP41219 470 aa17.35■□□□□ 0.37
MCF2L-232ENST00000535094 CYP2J2P51589 502 aa17.35■□□□□ 0.37
MCF2L-232ENST00000535094 NAB2Q15742 525 aa17.35■□□□□ 0.37
MCF2L-232ENST00000535094 KDM7AQ6ZMT4 941 aa17.35■□□□□ 0.37
MCF2L-232ENST00000535094 SYCP3Q8IZU3 236 aa17.35■□□□□ 0.37
MCF2L-232ENST00000535094 LZTS2Q9BRK4 669 aa17.35■□□□□ 0.37
MCF2L-232ENST00000535094 PNMA2Q9UL42 364 aa17.35■□□□□ 0.37
MCF2L-232ENST00000535094 UFL1O94874 794 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms