RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 PTPRSQ13332 1948 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 RSPH10B2B2RC85 870 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 AMHP03971 560 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 RSPH10BP0C881 870 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 MKRN4PQ13434 485 aaPredicted RBP11.86□□□□□ -0.51
CSDE1-217ENST00000534699 PLEKHG4Q58EX7 1191 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 FAM160B1Q5W0V3 765 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 Q6ZUG5 572 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 CYFIP1Q7L576 1253 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 RDM1Q8NG50 284 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 SLC9A2Q9UBY0 812 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 CYP46A1Q9Y6A2 500 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 DOCK5Q9H7D0 1870 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 IGKV6D-21A0A0A0MT36 114 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 USP11P51784 963 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 ANKRD1Q15327 319 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 DAGLBQ8NCG7 672 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 ATXN2LQ8WWM7 1075 aaKnown RBP11.86□□□□□ -0.51
CSDE1-217ENST00000534699 CRYGNQ8WXF5 182 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 SCLYQ96I15 445 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 RAD9AQ99638 391 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 JPH1Q9HDC5 661 aaPredicted RBP11.86□□□□□ -0.51
CSDE1-217ENST00000534699 TCEAL9Q9UHQ7 104 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 RWDD3Q9Y3V2 267 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 V9GY48 417 aaPredicted RBP11.86□□□□□ -0.51
CSDE1-217ENST00000534699 KDM3AQ9Y4C1 1321 aa11.86□□□□□ -0.51
CSDE1-217ENST00000534699 CDKL5O76039 1030 aa11.85□□□□□ -0.51
CSDE1-217ENST00000534699 ITGB5P18084 799 aa11.85□□□□□ -0.51
CSDE1-217ENST00000534699 ADCK5Q3MIX3 580 aa11.85□□□□□ -0.51
CSDE1-217ENST00000534699 OTOP2Q7RTS6 562 aa11.85□□□□□ -0.51
CSDE1-217ENST00000534699 SMAP1Q8IYB5 467 aaPredicted RBP11.85□□□□□ -0.51
CSDE1-217ENST00000534699 TRIM22Q8IYM9 498 aa11.85□□□□□ -0.51
CSDE1-217ENST00000534699 RSPH1Q8WYR4 309 aa11.85□□□□□ -0.51
CSDE1-217ENST00000534699 AZI2Q9H6S1 392 aa11.85□□□□□ -0.51
CSDE1-217ENST00000534699 GSTTP1A0A1W2PQM5 241 aa11.85□□□□□ -0.51
CSDE1-217ENST00000534699 ZBBXA8MT70 800 aa11.85□□□□□ -0.51
CSDE1-217ENST00000534699 ZNF286BP0CG31 522 aa11.85□□□□□ -0.51
CSDE1-217ENST00000534699 WDR5P61964 334 aaKnown RBP11.85□□□□□ -0.51
CSDE1-217ENST00000534699 ZNF746Q6NUN9 644 aaPredicted RBP11.85□□□□□ -0.51
CSDE1-217ENST00000534699 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.85□□□□□ -0.51
CSDE1-217ENST00000534699 SP7Q8TDD2 431 aaPredicted RBP11.85□□□□□ -0.51
CSDE1-217ENST00000534699 NKX2-4Q9H2Z4 354 aa11.85□□□□□ -0.51
CSDE1-217ENST00000534699 AGO4Q9HCK5 861 aaKnown RBP11.85□□□□□ -0.51
CSDE1-217ENST00000534699 STK36Q9NRP7 1315 aa11.85□□□□□ -0.51
CSDE1-217ENST00000534699 TCF7P36402 384 aaPredicted RBP11.84□□□□□ -0.51
CSDE1-217ENST00000534699 AAK1Q2M2I8 961 aa11.84□□□□□ -0.51
CSDE1-217ENST00000534699 ZNF484Q5JVG2 852 aa11.84□□□□□ -0.51
CSDE1-217ENST00000534699 PPP2R2DQ66LE6 453 aa11.84□□□□□ -0.51
CSDE1-217ENST00000534699 MYLIPQ8WY64 445 aa11.84□□□□□ -0.51
CSDE1-217ENST00000534699 FTHL17Q9BXU8 183 aa11.84□□□□□ -0.51
CSDE1-217ENST00000534699 CXXC1Q9P0U4 656 aaPredicted RBP11.84□□□□□ -0.51
CSDE1-217ENST00000534699 PPME1Q9Y570 386 aa11.84□□□□□ -0.51
CSDE1-217ENST00000534699 HBP1O60381 514 aa11.84□□□□□ -0.51
CSDE1-217ENST00000534699 PTGS1P23219 599 aa11.84□□□□□ -0.51
CSDE1-217ENST00000534699 HTRA4P83105 476 aaPredicted RBP11.84□□□□□ -0.51
CSDE1-217ENST00000534699 KRT76Q01546 638 aa11.84□□□□□ -0.51
CSDE1-217ENST00000534699 GRIN2CQ14957 1233 aa11.84□□□□□ -0.51
CSDE1-217ENST00000534699 ZNF618Q5T7W0 954 aa11.84□□□□□ -0.51
CSDE1-217ENST00000534699 FAM167AQ96KS9 214 aa11.84□□□□□ -0.51
CSDE1-217ENST00000534699 RNPEPQ9H4A4 650 aa11.84□□□□□ -0.51
CSDE1-217ENST00000534699 KCNH7Q9NS40 1196 aa11.84□□□□□ -0.51
CSDE1-217ENST00000534699 RTEL1Q9NZ71 1219 aa11.84□□□□□ -0.51
CSDE1-217ENST00000534699 INSL6Q9Y581 213 aa11.84□□□□□ -0.51
CSDE1-217ENST00000534699 PCDHA2Q9Y5H9 948 aa11.84□□□□□ -0.51
CSDE1-217ENST00000534699 SMIM35A0A1B0GVV1 85 aa11.83□□□□□ -0.51
CSDE1-217ENST00000534699 GTPBP6O43824 516 aaPredicted RBP11.83□□□□□ -0.51
CSDE1-217ENST00000534699 NBNO60934 754 aa11.83□□□□□ -0.51
CSDE1-217ENST00000534699 DEXIO95424 95 aa11.83□□□□□ -0.51
CSDE1-217ENST00000534699 ERVK-21P61565 698 aa11.83□□□□□ -0.51
CSDE1-217ENST00000534699 ARHGAP4P98171 946 aa11.83□□□□□ -0.51
CSDE1-217ENST00000534699 GPNMBQ14956 572 aa11.83□□□□□ -0.51
CSDE1-217ENST00000534699 NTRK3Q16288 839 aa11.83□□□□□ -0.51
CSDE1-217ENST00000534699 MIS18BP1Q6P0N0 1132 aa11.83□□□□□ -0.51
CSDE1-217ENST00000534699 DEFB128Q7Z7B8 93 aa11.83□□□□□ -0.51
CSDE1-217ENST00000534699 REXO1Q8N1G1 1221 aaKnown RBP11.83□□□□□ -0.51
CSDE1-217ENST00000534699 COG5Q9UP83 839 aa11.83□□□□□ -0.51
CSDE1-217ENST00000534699 YBX2Q9Y2T7 364 aaKnown RBP11.83□□□□□ -0.51
CSDE1-217ENST00000534699 CDC27P30260 824 aa11.83□□□□□ -0.52
CSDE1-217ENST00000534699 CDC42EP1Q00587 391 aa11.83□□□□□ -0.52
CSDE1-217ENST00000534699 PPFIA1Q13136 1202 aa11.83□□□□□ -0.52
CSDE1-217ENST00000534699 IER5Q5VY09 327 aa11.83□□□□□ -0.52
CSDE1-217ENST00000534699 BRF1Q92994 677 aa11.83□□□□□ -0.52
CSDE1-217ENST00000534699 RIT2Q99578 217 aa11.83□□□□□ -0.52
CSDE1-217ENST00000534699 LMAN2LQ9H0V9 348 aa11.83□□□□□ -0.52
CSDE1-217ENST00000534699 CEP131Q9UPN4 1083 aa11.83□□□□□ -0.52
CSDE1-217ENST00000534699 CARNS1A5YM72 827 aa11.83□□□□□ -0.52
CSDE1-217ENST00000534699 GJB5O95377 273 aa11.83□□□□□ -0.52
CSDE1-217ENST00000534699 XBP1P17861 261 aa11.83□□□□□ -0.52
CSDE1-217ENST00000534699 PDIA3P30101 505 aaKnown RBP11.83□□□□□ -0.52
CSDE1-217ENST00000534699 SFNP31947 248 aa11.83□□□□□ -0.52
CSDE1-217ENST00000534699 ZNF76P36508 570 aa11.83□□□□□ -0.52
CSDE1-217ENST00000534699 THPOP40225 353 aa11.83□□□□□ -0.52
CSDE1-217ENST00000534699 SSRP1Q08945 709 aaKnown RBP11.83□□□□□ -0.52
CSDE1-217ENST00000534699 MGAT3Q09327 533 aa11.83□□□□□ -0.52
CSDE1-217ENST00000534699 WASF1Q92558 559 aa11.83□□□□□ -0.52
CSDE1-217ENST00000534699 LRRC2Q9BYS8 371 aa11.83□□□□□ -0.52
CSDE1-217ENST00000534699 MYH9P35579 1960 aaKnown RBP11.82□□□□□ -0.52
CSDE1-217ENST00000534699 GRIK4Q16099 956 aa11.82□□□□□ -0.52
CSDE1-217ENST00000534699 PKN1Q16512 942 aa11.82□□□□□ -0.52
CSDE1-217ENST00000534699 UBE2SQ16763 222 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms