RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 RPAINQ86UA6 219 aa15.32■□□□□ 0.04
CAPN1-228ENST00000534373 TNPO1Q92973 898 aaKnown RBP15.32■□□□□ 0.04
CAPN1-228ENST00000534373 SMARCAD1Q9H4L7 1026 aa15.32■□□□□ 0.04
CAPN1-228ENST00000534373 KCNH7Q9NS40 1196 aa15.32■□□□□ 0.04
CAPN1-228ENST00000534373 SETD4Q9NVD3 440 aa15.32■□□□□ 0.04
CAPN1-228ENST00000534373 ERAP1Q9NZ08 941 aa15.32■□□□□ 0.04
CAPN1-228ENST00000534373 PRUNE2Q8WUY3 3088 aa15.32■□□□□ 0.04
CAPN1-228ENST00000534373 GBF1Q92538 1859 aa15.31■□□□□ 0.04
CAPN1-228ENST00000534373 GSTTP1A0A1W2PQM5 241 aa15.31■□□□□ 0.04
CAPN1-228ENST00000534373 TLL1O43897 1013 aa15.31■□□□□ 0.04
CAPN1-228ENST00000534373 RPS6KB1P23443 525 aa15.31■□□□□ 0.04
CAPN1-228ENST00000534373 CLK2P49760 499 aaKnown RBP15.31■□□□□ 0.04
CAPN1-228ENST00000534373 EVCP57679 992 aa15.31■□□□□ 0.04
CAPN1-228ENST00000534373 SP4Q02446 784 aa15.31■□□□□ 0.04
CAPN1-228ENST00000534373 MBTPS1Q14703 1052 aa15.31■□□□□ 0.04
CAPN1-228ENST00000534373 CEP55Q53EZ4 464 aa15.31■□□□□ 0.04
CAPN1-228ENST00000534373 PLEKHG4Q58EX7 1191 aa15.31■□□□□ 0.04
CAPN1-228ENST00000534373 CCDC12Q8WUD4 166 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-228ENST00000534373 BRF1Q92994 677 aa15.31■□□□□ 0.04
CAPN1-228ENST00000534373 NFASCO94856 1347 aa15.31■□□□□ 0.04
CAPN1-228ENST00000534373 NID2Q14112 1375 aa15.31■□□□□ 0.04
CAPN1-228ENST00000534373 ESYT2A0FGR8 921 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 MEIS1O00470 390 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 PRPF3O43395 683 aaKnown RBP15.3■□□□□ 0.04
CAPN1-228ENST00000534373 GJB5O95377 273 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 RPLP2P05387 115 aaKnown RBP15.3■□□□□ 0.04
CAPN1-228ENST00000534373 NEFLP07196 543 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 SCG2P13521 617 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 IGFBP4P22692 258 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 SREBF1P36956 1147 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 TAP1Q03518 808 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 APOBRQ0VD83 1088 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 FAM26DQ5JW98 314 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 TAF2Q6P1X5 1199 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 NIPA1Q7RTP0 329 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 TRIM50Q86XT4 487 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 DBF4BQ8NFT6 615 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 LMBR1Q8WVP7 490 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 SYMPKQ92797 1274 aaKnown RBP15.3■□□□□ 0.04
CAPN1-228ENST00000534373 GLG1Q92896 1179 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 RAD9AQ99638 391 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 SDF4Q9BRK5 362 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 ZBED2Q9BTP6 218 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 COL25A1Q9BXS0 654 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-228ENST00000534373 ANO3Q9BYT9 981 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 ZMYND12Q9H0C1 365 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 JPH1Q9HDC5 661 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-228ENST00000534373 SLC9A2Q9UBY0 812 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 NAP1L2Q9ULW6 460 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-228ENST00000534373 TELO2Q9Y4R8 837 aa15.3■□□□□ 0.04
CAPN1-228ENST00000534373 RRN3P2A6NIE6 340 aa15.29■□□□□ 0.04
CAPN1-228ENST00000534373 CPA1P15085 419 aa15.29■□□□□ 0.04
CAPN1-228ENST00000534373 GNA11P29992 359 aa15.29■□□□□ 0.04
CAPN1-228ENST00000534373 ARHGAP4P98171 946 aa15.29■□□□□ 0.04
CAPN1-228ENST00000534373 ATXN2LQ8WWM7 1075 aaKnown RBP15.29■□□□□ 0.04
CAPN1-228ENST00000534373 SEPT8Q92599 483 aa15.29■□□□□ 0.04
CAPN1-228ENST00000534373 APBB2Q92870 758 aa15.29■□□□□ 0.04
CAPN1-228ENST00000534373 C6orf50Q9HD87 102 aa15.29■□□□□ 0.04
CAPN1-228ENST00000534373 CHD7Q9P2D1 2997 aa15.28■□□□□ 0.04
CAPN1-228ENST00000534373 GTPBP6O43824 516 aaPredicted RBP15.28■□□□□ 0.04
CAPN1-228ENST00000534373 AMHP03971 560 aa15.28■□□□□ 0.04
CAPN1-228ENST00000534373 CYP3A4P08684 503 aa15.28■□□□□ 0.04
CAPN1-228ENST00000534373 ZNF76P36508 570 aa15.28■□□□□ 0.04
CAPN1-228ENST00000534373 DEFB103AP81534 67 aa15.28■□□□□ 0.04
CAPN1-228ENST00000534373 AKAP17AQ02040 695 aaKnown RBP15.28■□□□□ 0.04
CAPN1-228ENST00000534373 MKRN4PQ13434 485 aaPredicted RBP15.28■□□□□ 0.04
CAPN1-228ENST00000534373 TCTN1Q2MV58 587 aa15.28■□□□□ 0.04
CAPN1-228ENST00000534373 ERICH6BQ5W0A0 696 aa15.28■□□□□ 0.04
CAPN1-228ENST00000534373 RUFY3Q7L099 469 aa15.28■□□□□ 0.04
CAPN1-228ENST00000534373 PLPPR4Q7Z2D5 763 aa15.28■□□□□ 0.04
CAPN1-228ENST00000534373 RSPH3Q86UC2 560 aa15.28■□□□□ 0.04
CAPN1-228ENST00000534373 USP38Q8NB14 1042 aa15.28■□□□□ 0.04
CAPN1-228ENST00000534373 CYP2W1Q8TAV3 490 aa15.28■□□□□ 0.04
CAPN1-228ENST00000534373 RNF26Q9BY78 433 aaPredicted RBP15.28■□□□□ 0.04
CAPN1-228ENST00000534373 TSPYL2Q9H2G4 693 aaPredicted RBP15.28■□□□□ 0.04
CAPN1-228ENST00000534373 AZI2Q9H6S1 392 aa15.28■□□□□ 0.04
CAPN1-228ENST00000534373 ZSWIM6Q9HCJ5 1215 aa15.28■□□□□ 0.04
CAPN1-228ENST00000534373 INSL6Q9Y581 213 aa15.28■□□□□ 0.04
CAPN1-228ENST00000534373 VCANP13611 3396 aa15.28■□□□□ 0.04
CAPN1-228ENST00000534373 DOCK5Q9H7D0 1870 aa15.27■□□□□ 0.04
CAPN1-228ENST00000534373 MBLAC1A4D2B0 266 aaPredicted RBP15.27■□□□□ 0.04
CAPN1-228ENST00000534373 ATG7O95352 703 aa15.27■□□□□ 0.04
CAPN1-228ENST00000534373 ARP10275 920 aa15.27■□□□□ 0.04
CAPN1-228ENST00000534373 IFNAR1P17181 557 aa15.27■□□□□ 0.04
CAPN1-228ENST00000534373 PDIA3P30101 505 aaKnown RBP15.27■□□□□ 0.04
CAPN1-228ENST00000534373 SLC26A2P50443 739 aa15.27■□□□□ 0.04
CAPN1-228ENST00000534373 PPFIA1Q13136 1202 aa15.27■□□□□ 0.04
CAPN1-228ENST00000534373 NTRK3Q16288 839 aa15.27■□□□□ 0.04
CAPN1-228ENST00000534373 PKN1Q16512 942 aa15.27■□□□□ 0.04
CAPN1-228ENST00000534373 BICD2Q8TD16 824 aa15.27■□□□□ 0.04
CAPN1-228ENST00000534373 CRYGNQ8WXF5 182 aa15.27■□□□□ 0.04
CAPN1-228ENST00000534373 TM6SF1Q9BZW5 370 aa15.27■□□□□ 0.04
CAPN1-228ENST00000534373 AGO4Q9HCK5 861 aaKnown RBP15.27■□□□□ 0.04
CAPN1-228ENST00000534373 PKD2L1Q9P0L9 805 aa15.27■□□□□ 0.04
CAPN1-228ENST00000534373 KAT6AQ92794 2004 aa15.27■□□□□ 0.03
CAPN1-228ENST00000534373 STAT5BP51692 787 aa15.26■□□□□ 0.03
CAPN1-228ENST00000534373 ACTR2P61160 394 aa15.26■□□□□ 0.03
CAPN1-228ENST00000534373 GRIK4Q16099 956 aa15.26■□□□□ 0.03
CAPN1-228ENST00000534373 TJAP1Q5JTD0 557 aa15.26■□□□□ 0.03
CAPN1-228ENST00000534373 PPM1EQ8WY54 764 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms