RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 CCND2P30279 289 aa14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 SP2Q02086 613 aa14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 FOXD4L5Q5VV16 416 aaPredicted RBP14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 CCDC155Q8N6L0 562 aa14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 C7orf31Q8N865 590 aa14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 AFAP1L1Q8TED9 768 aa14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 FOXD4L4Q8WXT5 416 aaPredicted RBP14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 PIBF1Q8WXW3 757 aa14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 DHX38Q92620 1227 aaKnown RBP14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 PHKBQ93100 1093 aa14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 ZFP91Q96JP5 570 aaPredicted RBP14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 SPATA33Q96N06 139 aa14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 KATNAL1Q9BW62 490 aa14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 SPZ1Q9BXG8 430 aa14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 FTOQ9C0B1 505 aaKnown RBP eCLIP14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 HDAC6Q9UBN7 1215 aa14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 GTF2IRD1Q9UHL9 959 aa14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 TTC28Q96AY4 2481 aa14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 KIAA1217Q5T5P2 1943 aa14□□□□□ -0.17
CHRDL2-209ENST00000534276 SORBS3O60504 671 aa14□□□□□ -0.17
CHRDL2-209ENST00000534276 GGPS1O95749 300 aa14□□□□□ -0.17
CHRDL2-209ENST00000534276 MBD3O95983 291 aa14□□□□□ -0.17
CHRDL2-209ENST00000534276 RBL2Q08999 1139 aa14□□□□□ -0.17
CHRDL2-209ENST00000534276 ADGRE1Q14246 886 aa14□□□□□ -0.17
CHRDL2-209ENST00000534276 MFSD10Q14728 455 aa14□□□□□ -0.17
CHRDL2-209ENST00000534276 GPNMBQ14956 572 aa14□□□□□ -0.17
CHRDL2-209ENST00000534276 KIAA0753Q2KHM9 967 aa14□□□□□ -0.17
CHRDL2-209ENST00000534276 KLHL40Q2TBA0 621 aa14□□□□□ -0.17
CHRDL2-209ENST00000534276 HSDL1Q3SXM5 330 aa14□□□□□ -0.17
CHRDL2-209ENST00000534276 GPKOWQ92917 476 aaPredicted RBP eCLIP14□□□□□ -0.17
CHRDL2-209ENST00000534276 ZNF396Q96N95 335 aaPredicted RBP14□□□□□ -0.17
CHRDL2-209ENST00000534276 FRMPD4Q14CM0 1322 aa14□□□□□ -0.17
CHRDL2-209ENST00000534276 SELPP16109 830 aa13.99□□□□□ -0.17
CHRDL2-209ENST00000534276 NCLP19338 710 aaKnown RBP13.99□□□□□ -0.17
CHRDL2-209ENST00000534276 U2AF2P26368 475 aaKnown RBP eCLIP13.99□□□□□ -0.17
CHRDL2-209ENST00000534276 SAFBQ15424 915 aaKnown RBP eCLIP13.99□□□□□ -0.17
CHRDL2-209ENST00000534276 PPP2R2DQ66LE6 453 aa13.99□□□□□ -0.17
CHRDL2-209ENST00000534276 KRT40Q6A162 431 aa13.99□□□□□ -0.17
CHRDL2-209ENST00000534276 SRBD1Q8N5C6 995 aaKnown RBP13.99□□□□□ -0.17
CHRDL2-209ENST00000534276 PHOSPHO2Q8TCD6 241 aa13.99□□□□□ -0.17
CHRDL2-209ENST00000534276 RRP36Q96EU6 259 aaKnown RBP13.99□□□□□ -0.17
CHRDL2-209ENST00000534276 SLC9A7Q96T83 725 aa13.99□□□□□ -0.17
CHRDL2-209ENST00000534276 SH3GLB2Q9NR46 395 aa13.99□□□□□ -0.17
CHRDL2-209ENST00000534276 CNTNAP5Q8WYK1 1306 aa13.99□□□□□ -0.17
CHRDL2-209ENST00000534276 SCN5AQ14524 2016 aa13.99□□□□□ -0.17
CHRDL2-209ENST00000534276 PRPF40AO75400 957 aaKnown RBP13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 PLEKHA8P1O95397 391 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 MRPS9P82933 396 aaKnown RBP13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 DNM1Q05193 864 aaKnown RBP13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 PKN1Q16512 942 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 PFKFB3Q16875 520 aaPredicted RBP13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 LRRC8DQ7L1W4 858 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 FERMT3Q86UX7 667 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 INPP4AQ96PE3 977 aaPredicted RBP13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 C16orf70Q9BSU1 422 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 FOXP1Q9H334 677 aaPredicted RBP13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 MLXIPQ9HAP2 919 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 V9GY48 417 aaPredicted RBP13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 CDH23Q9H251 3354 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 PIK3CDO00329 1044 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 DTNBO60941 627 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 STAM2O75886 525 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 BAIAP3O94812 1187 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 PARNO95453 639 aaKnown RBP13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 MMP1P03956 469 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 CKBP12277 381 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 IGFBP4P22692 258 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 ICAM3P32942 547 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 UBE2HP62256 183 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 ZNF200P98182 395 aaPredicted RBP13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 PTK7Q13308 1070 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 HIC1Q14526 733 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 TRIM71Q2Q1W2 868 aaKnown RBP13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 GALNT17Q6IS24 598 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 USP17L6PQ6QN14 398 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 HERC6Q8IVU3 1022 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 PPM1EQ8WY54 764 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 WNT8BQ93098 351 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 BCAS3Q9H6U6 928 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 PRDM6Q9NQX0 595 aa13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 SEC63Q9UGP8 760 aaKnown RBP13.98□□□□□ -0.17
CHRDL2-209ENST00000534276 TET1Q8NFU7 2136 aa13.97□□□□□ -0.17
CHRDL2-209ENST00000534276 SPATA31C2B4DYI2 1134 aa13.97□□□□□ -0.17
CHRDL2-209ENST00000534276 hCG_1984214I3L0E3 225 aa13.97□□□□□ -0.17
CHRDL2-209ENST00000534276 MEIS2O14770 477 aa13.97□□□□□ -0.17
CHRDL2-209ENST00000534276 NBNO60934 754 aa13.97□□□□□ -0.17
CHRDL2-209ENST00000534276 CXCL10P02778 98 aa13.97□□□□□ -0.17
CHRDL2-209ENST00000534276 CA3P07451 260 aa13.97□□□□□ -0.17
CHRDL2-209ENST00000534276 SCG2P13521 617 aa13.97□□□□□ -0.17
CHRDL2-209ENST00000534276 SEMA3FQ13275 785 aa13.97□□□□□ -0.17
CHRDL2-209ENST00000534276 GNPTABQ3T906 1256 aa13.97□□□□□ -0.17
CHRDL2-209ENST00000534276 TRAF7Q6Q0C0 670 aa13.97□□□□□ -0.17
CHRDL2-209ENST00000534276 CMTR1Q8N1G2 835 aaKnown RBP13.97□□□□□ -0.17
CHRDL2-209ENST00000534276 ZNF713Q8N859 430 aaPredicted RBP13.97□□□□□ -0.17
CHRDL2-209ENST00000534276 CUL5Q93034 780 aa13.97□□□□□ -0.17
CHRDL2-209ENST00000534276 RTEL1Q9NZ71 1219 aa13.97□□□□□ -0.17
CHRDL2-209ENST00000534276 RCOR1Q9UKL0 485 aa13.97□□□□□ -0.17
CHRDL2-209ENST00000534276 H3BRB1 525 aa13.96□□□□□ -0.18
CHRDL2-209ENST00000534276 FIBPO43427 364 aa13.96□□□□□ -0.18
CHRDL2-209ENST00000534276 KCNJ6P48051 423 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms