RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 FNDC3BQ53EP0 1204 aaKnown RBP5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 TTLL7Q6ZT98 887 aa5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 PROSER1Q86XN7 944 aa5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 PTRH1Q86Y79 214 aaKnown RBP5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 SP8Q8IXZ3 490 aa5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 CARFQ8N187 725 aa5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 CLUHP3Q96NS8 147 aa5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 ZCCHC4Q9H5U6 513 aa5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 PARD6AQ9NPB6 346 aa5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 USP35Q9P2H5 1018 aa5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 RBPJLQ9UBG7 517 aa5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 ACOT7O00154 380 aa5.91□□□□□ -1.46
ATPAF1-211ENST00000534216 PPP1R12AO14974 1030 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-211ENST00000534216 SASH1O94885 1247 aa5.91□□□□□ -1.46
ATPAF1-211ENST00000534216 INHBBP09529 407 aa5.91□□□□□ -1.46
ATPAF1-211ENST00000534216 KCNA6P17658 529 aa5.91□□□□□ -1.46
ATPAF1-211ENST00000534216 KRT15P19012 456 aa5.91□□□□□ -1.46
ATPAF1-211ENST00000534216 RPL13P26373 211 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-211ENST00000534216 SARSP49591 514 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-211ENST00000534216 JAM2P57087 298 aa5.91□□□□□ -1.46
ATPAF1-211ENST00000534216 LACTBP83111 547 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-211ENST00000534216 NLGN4XQ8N0W4 816 aa5.91□□□□□ -1.46
ATPAF1-211ENST00000534216 SYT8Q8NBV8 401 aa5.91□□□□□ -1.46
ATPAF1-211ENST00000534216 TMEM209Q96SK2 561 aa5.91□□□□□ -1.46
ATPAF1-211ENST00000534216 SPATA25Q9BR10 227 aa5.91□□□□□ -1.46
ATPAF1-211ENST00000534216 CELF4Q9BZC1 486 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-211ENST00000534216 SMURF1Q9HCE7 757 aa5.91□□□□□ -1.46
ATPAF1-211ENST00000534216 COQ6Q9Y2Z9 468 aa5.91□□□□□ -1.46
ATPAF1-211ENST00000534216 FAM90A27PA6NNH2 459 aa5.9□□□□□ -1.46
ATPAF1-211ENST00000534216 ASMTLO95671 621 aa5.9□□□□□ -1.46
ATPAF1-211ENST00000534216 KCNC1P48547 511 aa5.9□□□□□ -1.46
ATPAF1-211ENST00000534216 RTP5Q14D33 572 aa5.9□□□□□ -1.46
ATPAF1-211ENST00000534216 FIGNQ5HY92 759 aa5.9□□□□□ -1.46
ATPAF1-211ENST00000534216 PRR31Q5SQ13 230 aa5.9□□□□□ -1.46
ATPAF1-211ENST00000534216 ABHD17CQ6PCB6 329 aa5.9□□□□□ -1.46
ATPAF1-211ENST00000534216 TMC5Q6UXY8 1006 aa5.9□□□□□ -1.46
ATPAF1-211ENST00000534216 TTLL10Q6ZVT0 673 aa5.9□□□□□ -1.46
ATPAF1-211ENST00000534216 CISD2Q8N5K1 135 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-211ENST00000534216 ZSWIM3Q96MP5 696 aa5.9□□□□□ -1.46
ATPAF1-211ENST00000534216 CLIC6Q96NY7 704 aa5.9□□□□□ -1.46
ATPAF1-211ENST00000534216 ATP23Q9Y6H3 246 aa5.9□□□□□ -1.46
ATPAF1-211ENST00000534216 PTPN1P18031 435 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-211ENST00000534216 BTBD8Q5XKL5 378 aa5.89□□□□□ -1.47
ATPAF1-211ENST00000534216 CD276Q5ZPR3 534 aa5.89□□□□□ -1.47
ATPAF1-211ENST00000534216 VASNQ6EMK4 673 aa5.89□□□□□ -1.47
ATPAF1-211ENST00000534216 HHIPL2Q6UWX4 724 aa5.89□□□□□ -1.47
ATPAF1-211ENST00000534216 EP400NLQ6ZTU2 488 aa5.89□□□□□ -1.47
ATPAF1-211ENST00000534216 JAZF1Q86VZ6 243 aa5.89□□□□□ -1.47
ATPAF1-211ENST00000534216 HOMER1Q86YM7 354 aa5.89□□□□□ -1.47
ATPAF1-211ENST00000534216 SYNPOQ8N3V7 929 aa5.89□□□□□ -1.47
ATPAF1-211ENST00000534216 DTX3Q8N9I9 347 aa5.89□□□□□ -1.47
ATPAF1-211ENST00000534216 FEZF2Q8TBJ5 459 aa5.89□□□□□ -1.47
ATPAF1-211ENST00000534216 XYLT2Q9H1B5 865 aa5.89□□□□□ -1.47
ATPAF1-211ENST00000534216 RIC8BQ9NVN3 520 aa5.89□□□□□ -1.47
ATPAF1-211ENST00000534216 RAPGEFL1Q9UHV5 662 aa5.89□□□□□ -1.47
ATPAF1-211ENST00000534216 OTOL1A6NHN0 477 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-211ENST00000534216 KCNK3O14649 394 aa5.88□□□□□ -1.47
ATPAF1-211ENST00000534216 RFPL3O75679 317 aa5.88□□□□□ -1.47
ATPAF1-211ENST00000534216 DNAJC8O75937 253 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-211ENST00000534216 NPTXRO95502 500 aa5.88□□□□□ -1.47
ATPAF1-211ENST00000534216 HOXA5P20719 270 aa5.88□□□□□ -1.47
ATPAF1-211ENST00000534216 GJA4P35212 333 aa5.88□□□□□ -1.47
ATPAF1-211ENST00000534216 OVCH1Q7RTY7 1134 aa5.88□□□□□ -1.47
ATPAF1-211ENST00000534216 ZNF761Q86XN6 746 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-211ENST00000534216 IGSF22Q8N9C0 903 aa5.88□□□□□ -1.47
ATPAF1-211ENST00000534216 ADAMTS17Q8TE56 1095 aa5.88□□□□□ -1.47
ATPAF1-211ENST00000534216 WRNIP1Q96S55 665 aa5.88□□□□□ -1.47
ATPAF1-211ENST00000534216 DLL4Q9NR61 685 aa5.88□□□□□ -1.47
ATPAF1-211ENST00000534216 FANCLQ9NW38 375 aa5.88□□□□□ -1.47
ATPAF1-211ENST00000534216 MRPL42Q9Y6G3 142 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-211ENST00000534216 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-211ENST00000534216 DDX3XO00571 662 aaKnown RBP eCLIP5.87□□□□□ -1.47
ATPAF1-211ENST00000534216 CLASP2O75122 1294 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-211ENST00000534216 ASLP04424 464 aa5.87□□□□□ -1.47
ATPAF1-211ENST00000534216 ENO2P09104 434 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-211ENST00000534216 ZNF28P17035 718 aa5.87□□□□□ -1.47
ATPAF1-211ENST00000534216 MLLT6P55198 1093 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-211ENST00000534216 PFKPQ01813 784 aa5.87□□□□□ -1.47
ATPAF1-211ENST00000534216 PABPC4Q13310 644 aaKnown RBP eCLIP5.87□□□□□ -1.47
ATPAF1-211ENST00000534216 TCEA2Q15560 299 aa5.87□□□□□ -1.47
ATPAF1-211ENST00000534216 SKIDA1Q1XH10 827 aa5.87□□□□□ -1.47
ATPAF1-211ENST00000534216 TMEM177Q53S58 311 aa5.87□□□□□ -1.47
ATPAF1-211ENST00000534216 NOSTRINQ8IVI9 506 aa5.87□□□□□ -1.47
ATPAF1-211ENST00000534216 ZDHHC14Q8IZN3 488 aa5.87□□□□□ -1.47
ATPAF1-211ENST00000534216 APPBP2Q92624 585 aa5.87□□□□□ -1.47
ATPAF1-211ENST00000534216 CROTQ9UKG9 612 aa5.87□□□□□ -1.47
ATPAF1-211ENST00000534216 TNPO3Q9Y5L0 923 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-211ENST00000534216 ZNF839A8K0R7 811 aa5.86□□□□□ -1.47
ATPAF1-211ENST00000534216 B4E1Z4 1266 aa5.86□□□□□ -1.47
ATPAF1-211ENST00000534216 OPA1O60313 960 aa5.86□□□□□ -1.47
ATPAF1-211ENST00000534216 NOBOXO60393 691 aa5.86□□□□□ -1.47
ATPAF1-211ENST00000534216 CYP7B1O75881 506 aa5.86□□□□□ -1.47
ATPAF1-211ENST00000534216 C4BPAP04003 597 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-211ENST00000534216 SDSP20132 328 aa5.86□□□□□ -1.47
ATPAF1-211ENST00000534216 IL13P35225 146 aa5.86□□□□□ -1.47
ATPAF1-211ENST00000534216 IGFALSP35858 605 aa5.86□□□□□ -1.47
ATPAF1-211ENST00000534216 DBPQ10586 325 aaPredicted RBP5.86□□□□□ -1.47
ATPAF1-211ENST00000534216 ZNF460Q14592 562 aa5.86□□□□□ -1.47
ATPAF1-211ENST00000534216 SEC23AQ15436 765 aa5.86□□□□□ -1.47
ATPAF1-211ENST00000534216 TKFCQ3LXA3 575 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms