RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	NAT1	P18440	290 aa		5.21	□□□□□ -1.58
RDX-215	ENST00000533961	DPT	Q07507	201 aa		5.21	□□□□□ -1.58
RDX-215	ENST00000533961	LONRF2	Q1L5Z9	754 aa		5.21	□□□□□ -1.58
RDX-215	ENST00000533961	PRAMEF18	Q5VWM3	479 aa		5.21	□□□□□ -1.58
RDX-215	ENST00000533961	CD300LD	Q6UXZ3	194 aa		5.21	□□□□□ -1.58
RDX-215	ENST00000533961	CCDC103	Q8IW40	242 aa		5.21	□□□□□ -1.58
RDX-215	ENST00000533961	TEX2	Q8IWB9	1127 aa		5.21	□□□□□ -1.58
RDX-215	ENST00000533961	PDGFD	Q9GZP0	370 aa	Predicted RBP	5.21	□□□□□ -1.58
RDX-215	ENST00000533961	CCDC113	Q9H0I3	377 aa		5.21	□□□□□ -1.58
RDX-215	ENST00000533961	SNTG2	Q9NY99	539 aa		5.21	□□□□□ -1.58
RDX-215	ENST00000533961	SIRPG	Q9P1W8	387 aa		5.21	□□□□□ -1.58
RDX-215	ENST00000533961	FBLN5	Q9UBX5	448 aa		5.21	□□□□□ -1.58
RDX-215	ENST00000533961	MSRB2	Q9Y3D2	182 aa		5.21	□□□□□ -1.58
RDX-215	ENST00000533961	TRAV20	A0A0B4J274	112 aa		5.2	□□□□□ -1.58
RDX-215	ENST00000533961	BCL6	P41182	706 aa		5.2	□□□□□ -1.58
RDX-215	ENST00000533961	ITGA1	P56199	1179 aa		5.2	□□□□□ -1.58
RDX-215	ENST00000533961	NKX3-2	P78367	333 aa		5.2	□□□□□ -1.58
RDX-215	ENST00000533961	RBL2	Q08999	1139 aa		5.2	□□□□□ -1.58
RDX-215	ENST00000533961	RASGRF1	Q13972	1273 aa		5.2	□□□□□ -1.58
RDX-215	ENST00000533961	RASA3	Q14644	834 aa		5.2	□□□□□ -1.58
RDX-215	ENST00000533961	PRSS53	Q2L4Q9	553 aa		5.2	□□□□□ -1.58
RDX-215	ENST00000533961	MIIP	Q5JXC2	388 aa		5.2	□□□□□ -1.58
RDX-215	ENST00000533961	YOD1	Q5VVQ6	348 aa	Predicted RBP	5.2	□□□□□ -1.58
RDX-215	ENST00000533961	SLFN13	Q68D06	897 aa		5.2	□□□□□ -1.58
RDX-215	ENST00000533961	MILR1	Q7Z6M3	343 aa		5.2	□□□□□ -1.58
RDX-215	ENST00000533961	STK32C	Q86UX6	486 aa		5.2	□□□□□ -1.58
RDX-215	ENST00000533961	TTLL11	Q8NHH1	800 aa		5.2	□□□□□ -1.58
RDX-215	ENST00000533961	SRPK1	Q96SB4	655 aa	Known RBP	5.2	□□□□□ -1.58
RDX-215	ENST00000533961	SYT3	Q9BQG1	590 aa		5.2	□□□□□ -1.58
RDX-215	ENST00000533961	SMOC1	Q9H4F8	434 aa		5.2	□□□□□ -1.58
RDX-215	ENST00000533961	PCDHA2	Q9Y5H9	948 aa		5.2	□□□□□ -1.58
RDX-215	ENST00000533961	PPFIA2	O75334	1257 aa		5.19	□□□□□ -1.58
RDX-215	ENST00000533961	TADA3	O75528	432 aa		5.19	□□□□□ -1.58
RDX-215	ENST00000533961	NANOS3	P60323	173 aa	Known RBP	5.19	□□□□□ -1.58
RDX-215	ENST00000533961	KIZ	Q2M2Z5	673 aa		5.19	□□□□□ -1.58
RDX-215	ENST00000533961	HS1BP3	Q53T59	392 aa		5.19	□□□□□ -1.58
RDX-215	ENST00000533961	STEAP3	Q658P3	488 aa		5.19	□□□□□ -1.58
RDX-215	ENST00000533961	AMER2	Q8N7J2	671 aa		5.19	□□□□□ -1.58
RDX-215	ENST00000533961	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
RDX-215	ENST00000533961		Q8TCH9	128 aa		5.19	□□□□□ -1.58
RDX-215	ENST00000533961	UBXN4	Q92575	508 aa		5.19	□□□□□ -1.58
RDX-215	ENST00000533961	DEPDC7	Q96QD5	511 aa		5.19	□□□□□ -1.58
RDX-215	ENST00000533961	DNAJC7	Q99615	494 aa		5.19	□□□□□ -1.58
RDX-215	ENST00000533961	YIPF4	Q9BSR8	244 aa		5.19	□□□□□ -1.58
RDX-215	ENST00000533961	IER2	Q9BTL4	223 aa		5.19	□□□□□ -1.58
RDX-215	ENST00000533961	TMEM168	Q9H0V1	697 aa		5.19	□□□□□ -1.58
RDX-215	ENST00000533961	OSBPL2	Q9H1P3	480 aa		5.19	□□□□□ -1.58
RDX-215	ENST00000533961	IKZF4	Q9H2S9	585 aa		5.19	□□□□□ -1.58
RDX-215	ENST00000533961	BTG4	Q9NY30	223 aa		5.19	□□□□□ -1.58
RDX-215	ENST00000533961	CLDND1	Q9NY35	253 aa		5.19	□□□□□ -1.58
RDX-215	ENST00000533961	TNFRSF18	Q9Y5U5	241 aa		5.19	□□□□□ -1.58
RDX-215	ENST00000533961	PCSK5	Q92824	1860 aa		5.18	□□□□□ -1.58
RDX-215	ENST00000533961	BLACE	A4D250	179 aa		5.18	□□□□□ -1.58
RDX-215	ENST00000533961	DLX3	O60479	287 aa		5.18	□□□□□ -1.58
RDX-215	ENST00000533961	ZNF202	O95125	648 aa		5.18	□□□□□ -1.58
RDX-215	ENST00000533961	ZNF28	P17035	718 aa		5.18	□□□□□ -1.58
RDX-215	ENST00000533961	FPR2	P25090	351 aa		5.18	□□□□□ -1.58
RDX-215	ENST00000533961	HNRNPA0	Q13151	305 aa	Known RBP	5.18	□□□□□ -1.58
RDX-215	ENST00000533961	FOXB2	Q5VYV0	432 aa		5.18	□□□□□ -1.58
RDX-215	ENST00000533961	STYK1	Q6J9G0	422 aa		5.18	□□□□□ -1.58
RDX-215	ENST00000533961	PKN3	Q6P5Z2	889 aa		5.18	□□□□□ -1.58
RDX-215	ENST00000533961	NLRP10	Q86W26	655 aa		5.18	□□□□□ -1.58
RDX-215	ENST00000533961	SCUBE1	Q8IWY4	988 aa		5.18	□□□□□ -1.58
RDX-215	ENST00000533961	FAM26E	Q8N5C1	309 aa		5.18	□□□□□ -1.58
RDX-215	ENST00000533961	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	5.18	□□□□□ -1.58
RDX-215	ENST00000533961	MBD6	Q96DN6	1003 aa		5.18	□□□□□ -1.58
RDX-215	ENST00000533961	TOE1	Q96GM8	510 aa	Known RBP	5.18	□□□□□ -1.58
RDX-215	ENST00000533961	CHAMP1	Q96JM3	812 aa		5.18	□□□□□ -1.58
RDX-215	ENST00000533961	IPO9	Q96P70	1041 aa	Known RBP	5.18	□□□□□ -1.58
RDX-215	ENST00000533961	TMEM209	Q96SK2	561 aa		5.18	□□□□□ -1.58
RDX-215	ENST00000533961	L2HGDH	Q9H9P8	463 aa		5.18	□□□□□ -1.58
RDX-215	ENST00000533961	SLC6A20	Q9NP91	592 aa		5.18	□□□□□ -1.58
RDX-215	ENST00000533961	DTL	Q9NZJ0	730 aa		5.18	□□□□□ -1.58
RDX-215	ENST00000533961	TMEFF2	Q9UIK5	374 aa	Predicted RBP	5.18	□□□□□ -1.58
RDX-215	ENST00000533961	PCDHB4	Q9Y5E5	795 aa		5.18	□□□□□ -1.58
RDX-215	ENST00000533961	ARNTL	O00327	626 aa		5.17	□□□□□ -1.58
RDX-215	ENST00000533961	PDPK1	O15530	556 aa		5.17	□□□□□ -1.58
RDX-215	ENST00000533961	APP	P05067	770 aa		5.17	□□□□□ -1.58
RDX-215	ENST00000533961	PABPC1	P11940	636 aa	Known RBP	5.17	□□□□□ -1.58
RDX-215	ENST00000533961	SPIRE1	Q08AE8	756 aa		5.17	□□□□□ -1.58
RDX-215	ENST00000533961	IFRD2	Q12894	506 aa	Predicted RBP	5.17	□□□□□ -1.58
RDX-215	ENST00000533961	PRKD1	Q15139	912 aa	Predicted RBP	5.17	□□□□□ -1.58
RDX-215	ENST00000533961	DENND5A	Q6IQ26	1287 aa		5.17	□□□□□ -1.58
RDX-215	ENST00000533961	NSMF	Q6X4W1	530 aa		5.17	□□□□□ -1.58
RDX-215	ENST00000533961	MAMDC2	Q7Z304	686 aa	Predicted RBP	5.17	□□□□□ -1.58
RDX-215	ENST00000533961	DNAJC10	Q8IXB1	793 aa		5.17	□□□□□ -1.58
RDX-215	ENST00000533961	KBTBD2	Q8IY47	623 aa		5.17	□□□□□ -1.58
RDX-215	ENST00000533961	IFNL3	Q8IZI9	196 aa		5.17	□□□□□ -1.58
RDX-215	ENST00000533961	LILRB2	Q8N423	598 aa		5.17	□□□□□ -1.58
RDX-215	ENST00000533961	TRIM8	Q9BZR9	551 aa		5.17	□□□□□ -1.58
RDX-215	ENST00000533961	CDK11A	Q9UQ88	783 aa	Predicted RBP	5.17	□□□□□ -1.58
RDX-215	ENST00000533961	SIT1	Q9Y3P8	196 aa		5.17	□□□□□ -1.58
RDX-215	ENST00000533961	CCDC163	A0A0D9SF12	145 aa		5.16	□□□□□ -1.58
RDX-215	ENST00000533961	AQP7	O14520	342 aa		5.16	□□□□□ -1.58
RDX-215	ENST00000533961	B4GALT4	O60513	344 aa		5.16	□□□□□ -1.58
RDX-215	ENST00000533961	CHGB	P05060	677 aa		5.16	□□□□□ -1.58
RDX-215	ENST00000533961	FAM153B	P0C7A2	387 aa		5.16	□□□□□ -1.58
RDX-215	ENST00000533961	MCM7	P33993	719 aa		5.16	□□□□□ -1.58
RDX-215	ENST00000533961	GPR85	P60893	370 aa		5.16	□□□□□ -1.58
RDX-215	ENST00000533961	SSRP1	Q08945	709 aa	Known RBP	5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms