RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 TUT1Q9H6E5 874 aaKnown RBP15.21■□□□□ 0.03
CMTM1-219ENST00000533953 JPH1Q9HDC5 661 aaPredicted RBP15.21■□□□□ 0.03
CMTM1-219ENST00000533953 SLC9A2Q9UBY0 812 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 WNT7AO00755 349 aa15.2■□□□□ 0.02
CMTM1-219ENST00000533953 SLC37A4O43826 429 aa15.2■□□□□ 0.02
CMTM1-219ENST00000533953 CCL23P55773 120 aa15.2■□□□□ 0.02
CMTM1-219ENST00000533953 TRIM29Q14134 588 aa15.2■□□□□ 0.02
CMTM1-219ENST00000533953 NFRKBQ6P4R8 1299 aa15.2■□□□□ 0.02
CMTM1-219ENST00000533953 C7orf31Q8N865 590 aa15.2■□□□□ 0.02
CMTM1-219ENST00000533953 FAM184AQ8NB25 1140 aa15.2■□□□□ 0.02
CMTM1-219ENST00000533953 PRO3102Q9H379 93 aa15.2■□□□□ 0.02
CMTM1-219ENST00000533953 SETD4Q9NVD3 440 aa15.2■□□□□ 0.02
CMTM1-219ENST00000533953 NFASCO94856 1347 aa15.19■□□□□ 0.02
CMTM1-219ENST00000533953 MROH7Q68CQ1 1323 aa15.19■□□□□ 0.02
CMTM1-219ENST00000533953 TIMP1P01033 207 aa15.19■□□□□ 0.02
CMTM1-219ENST00000533953 SMIM10L2AP0DMW4 78 aa15.19■□□□□ 0.02
CMTM1-219ENST00000533953 SMIM10L2BP0DMW5 78 aa15.19■□□□□ 0.02
CMTM1-219ENST00000533953 ATP2B1P20020 1258 aa15.19■□□□□ 0.02
CMTM1-219ENST00000533953 PTGISQ16647 500 aa15.19■□□□□ 0.02
CMTM1-219ENST00000533953 FAM177A1Q8N128 213 aaPredicted RBP15.19■□□□□ 0.02
CMTM1-219ENST00000533953 GLG1Q92896 1179 aa15.19■□□□□ 0.02
CMTM1-219ENST00000533953 WNT8BQ93098 351 aa15.19■□□□□ 0.02
CMTM1-219ENST00000533953 ZBTB10Q96DT7 871 aa15.19■□□□□ 0.02
CMTM1-219ENST00000533953 NOC4LQ9BVI4 516 aaKnown RBP15.19■□□□□ 0.02
CMTM1-219ENST00000533953 UBE2OQ9C0C9 1292 aaKnown RBP15.19■□□□□ 0.02
CMTM1-219ENST00000533953 MYH7BA7E2Y1 1941 aa15.18■□□□□ 0.02
CMTM1-219ENST00000533953 CYP3A7-CYP3A51PA0A087WV96 503 aa15.18■□□□□ 0.02
CMTM1-219ENST00000533953 ACRP10323 421 aa15.18■□□□□ 0.02
CMTM1-219ENST00000533953 CYP3A7P24462 503 aa15.18■□□□□ 0.02
CMTM1-219ENST00000533953 HMGN5P82970 282 aaKnown RBP15.18■□□□□ 0.02
CMTM1-219ENST00000533953 TRMT1LQ7Z2T5 733 aaKnown RBP15.18■□□□□ 0.02
CMTM1-219ENST00000533953 NEK8Q86SG6 692 aa15.18■□□□□ 0.02
CMTM1-219ENST00000533953 DHX38Q92620 1227 aaKnown RBP15.18■□□□□ 0.02
CMTM1-219ENST00000533953 SCLYQ96I15 445 aa15.18■□□□□ 0.02
CMTM1-219ENST00000533953 HIPK3Q9H422 1215 aa15.18■□□□□ 0.02
CMTM1-219ENST00000533953 FOXD4L1Q9NU39 408 aa15.18■□□□□ 0.02
CMTM1-219ENST00000533953 DDX25Q9UHL0 483 aaKnown RBP15.18■□□□□ 0.02
CMTM1-219ENST00000533953 GTF2IRD1Q9UHL9 959 aa15.18■□□□□ 0.02
CMTM1-219ENST00000533953 NOD1Q9Y239 953 aa15.18■□□□□ 0.02
CMTM1-219ENST00000533953 DOCK5Q9H7D0 1870 aa15.18■□□□□ 0.02
CMTM1-219ENST00000533953 KIF28PB7ZC32 967 aa15.17■□□□□ 0.02
CMTM1-219ENST00000533953 CHMP2AO43633 222 aa15.17■□□□□ 0.02
CMTM1-219ENST00000533953 CCNT1O60563 726 aaKnown RBP15.17■□□□□ 0.02
CMTM1-219ENST00000533953 CSF2RAP15509 400 aa15.17■□□□□ 0.02
CMTM1-219ENST00000533953 GJB2P29033 226 aa15.17■□□□□ 0.02
CMTM1-219ENST00000533953 MCM2P49736 904 aa15.17■□□□□ 0.02
CMTM1-219ENST00000533953 SETQ01105 290 aaPredicted RBP15.17■□□□□ 0.02
CMTM1-219ENST00000533953 PTPN11Q06124 597 aaPredicted RBP15.17■□□□□ 0.02
CMTM1-219ENST00000533953 Q4G0T1 1027 aa15.17■□□□□ 0.02
CMTM1-219ENST00000533953 C9orf50Q5SZB4 431 aa15.17■□□□□ 0.02
CMTM1-219ENST00000533953 SWSAP1Q6NVH7 229 aa15.17■□□□□ 0.02
CMTM1-219ENST00000533953 ABHD15Q6UXT9 468 aa15.17■□□□□ 0.02
CMTM1-219ENST00000533953 FBXO18Q8NFZ0 1043 aa15.17■□□□□ 0.02
CMTM1-219ENST00000533953 SLC5A5Q92911 643 aa15.17■□□□□ 0.02
CMTM1-219ENST00000533953 MBOAT7Q96N66 472 aa15.17■□□□□ 0.02
CMTM1-219ENST00000533953 KATNAL1Q9BW62 490 aa15.17■□□□□ 0.02
CMTM1-219ENST00000533953 WNT8AQ9H1J5 351 aa15.17■□□□□ 0.02
CMTM1-219ENST00000533953 BRMS1Q9HCU9 246 aa15.17■□□□□ 0.02
CMTM1-219ENST00000533953 BACH1O14867 736 aa15.16■□□□□ 0.02
CMTM1-219ENST00000533953 TREHO43280 583 aa15.16■□□□□ 0.02
CMTM1-219ENST00000533953 LGR5O75473 907 aa15.16■□□□□ 0.02
CMTM1-219ENST00000533953 ATG7O95352 703 aa15.16■□□□□ 0.02
CMTM1-219ENST00000533953 SUPT20HL2P0C7V6 817 aa15.16■□□□□ 0.02
CMTM1-219ENST00000533953 STAT5BP51692 787 aa15.16■□□□□ 0.02
CMTM1-219ENST00000533953 SHHQ15465 462 aa15.16■□□□□ 0.02
CMTM1-219ENST00000533953 HABP4Q5JVS0 413 aaKnown RBP15.16■□□□□ 0.02
CMTM1-219ENST00000533953 C16orf59Q7L2K0 433 aa15.16■□□□□ 0.02
CMTM1-219ENST00000533953 SESTD1Q86VW0 696 aa15.16■□□□□ 0.02
CMTM1-219ENST00000533953 CCDC60Q8IWA6 550 aaPredicted RBP15.16■□□□□ 0.02
CMTM1-219ENST00000533953 ETNPPLQ8TBG4 499 aa15.16■□□□□ 0.02
CMTM1-219ENST00000533953 TRAPPC12Q8WVT3 735 aa15.16■□□□□ 0.02
CMTM1-219ENST00000533953 SEZ6LQ9BYH1 1024 aa15.16■□□□□ 0.02
CMTM1-219ENST00000533953 UNC45AQ9H3U1 944 aa15.16■□□□□ 0.02
CMTM1-219ENST00000533953 SMARCAD1Q9H4L7 1026 aa15.16■□□□□ 0.02
CMTM1-219ENST00000533953 TBC1D22BQ9NU19 505 aa15.16■□□□□ 0.02
CMTM1-219ENST00000533953 SCN10AQ9Y5Y9 1956 aa15.16■□□□□ 0.02
CMTM1-219ENST00000533953 C17orf102A2RUQ5 167 aa15.15■□□□□ 0.02
CMTM1-219ENST00000533953 GAS7O60861 476 aa15.15■□□□□ 0.02
CMTM1-219ENST00000533953 PSMD10O75832 226 aa15.15■□□□□ 0.02
CMTM1-219ENST00000533953 ATP4AP20648 1035 aa15.15■□□□□ 0.02
CMTM1-219ENST00000533953 IGBP1P78318 339 aa15.15■□□□□ 0.02
CMTM1-219ENST00000533953 FPGSQ05932 587 aa15.15■□□□□ 0.02
CMTM1-219ENST00000533953 PLCB4Q15147 1175 aa15.15■□□□□ 0.02
CMTM1-219ENST00000533953 SAFBQ15424 915 aaKnown RBP eCLIP15.15■□□□□ 0.02
CMTM1-219ENST00000533953 LRCH2Q5VUJ6 765 aa15.15■□□□□ 0.02
CMTM1-219ENST00000533953 MFSD5Q6N075 450 aa15.15■□□□□ 0.02
CMTM1-219ENST00000533953 POTEDQ86YR6 584 aa15.15■□□□□ 0.02
CMTM1-219ENST00000533953 HAS1Q92839 578 aa15.15■□□□□ 0.02
CMTM1-219ENST00000533953 ATP6V0A1Q93050 837 aa15.15■□□□□ 0.02
CMTM1-219ENST00000533953 VWCEQ96DN2 955 aa15.15■□□□□ 0.02
CMTM1-219ENST00000533953 AZI2Q9H6S1 392 aa15.15■□□□□ 0.02
CMTM1-219ENST00000533953 ZNF215Q9UL58 517 aaPredicted RBP15.15■□□□□ 0.02
CMTM1-219ENST00000533953 SMC3Q9UQE7 1217 aa15.15■□□□□ 0.02
CMTM1-219ENST00000533953 IGKV6D-21A0A0A0MT36 114 aa15.14■□□□□ 0.01
CMTM1-219ENST00000533953 INSRRP14616 1297 aa15.14■□□□□ 0.01
CMTM1-219ENST00000533953 BMP8BP34820 402 aa15.14■□□□□ 0.01
CMTM1-219ENST00000533953 CUL4AQ13619 759 aa15.14■□□□□ 0.01
CMTM1-219ENST00000533953 NBR1Q14596 966 aa15.14■□□□□ 0.01
CMTM1-219ENST00000533953 PPP4R3AQ6IN85 833 aa15.14■□□□□ 0.01
CMTM1-219ENST00000533953 MIS18BP1Q6P0N0 1132 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms