RNA–Protein interactions for RNA: ENST00000533907.1

RRP8-204, Transcript of ribosomal RNA processing 8, humanhuman

TSL 5

Gene RRP8, Length 1,989 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8-204ENST00000533907 ODF2LQ9ULJ1 636 aa16.66■□□□□ 0.26
RRP8-204ENST00000533907 PALM3A6NDB9 673 aaPredicted RBP16.66■□□□□ 0.26
RRP8-204ENST00000533907 KCNK3O14649 394 aa16.66■□□□□ 0.26
RRP8-204ENST00000533907 GHRP10912 638 aa16.66■□□□□ 0.26
RRP8-204ENST00000533907 FXR2P51116 673 aaKnown RBP eCLIP16.66■□□□□ 0.26
RRP8-204ENST00000533907 USP11P51784 963 aa16.66■□□□□ 0.26
RRP8-204ENST00000533907 POLR2FP61218 127 aaKnown RBP16.66■□□□□ 0.26
RRP8-204ENST00000533907 FKBP3Q00688 224 aaKnown RBP16.66■□□□□ 0.26
RRP8-204ENST00000533907 RAPGEF1Q13905 1077 aa16.66■□□□□ 0.26
RRP8-204ENST00000533907 ASIC2Q16515 512 aa16.66■□□□□ 0.26
RRP8-204ENST00000533907 TMEM266Q2M3C6 531 aa16.66■□□□□ 0.26
RRP8-204ENST00000533907 ZCWPW2Q504Y3 356 aa16.66■□□□□ 0.26
RRP8-204ENST00000533907 SLC10A5Q5PT55 438 aa16.66■□□□□ 0.26
RRP8-204ENST00000533907 RC3H1Q5TC82 1133 aaKnown RBP16.66■□□□□ 0.26
RRP8-204ENST00000533907 DYMQ7RTS9 669 aa16.66■□□□□ 0.26
RRP8-204ENST00000533907 MYOCDQ8IZQ8 938 aa16.66■□□□□ 0.26
RRP8-204ENST00000533907 TATDN2Q93075 761 aa16.66■□□□□ 0.26
RRP8-204ENST00000533907 CEP63Q96MT8 703 aa16.66■□□□□ 0.26
RRP8-204ENST00000533907 PNMA5Q96PV4 448 aa16.66■□□□□ 0.26
RRP8-204ENST00000533907 AIPL1Q9NZN9 384 aa16.66■□□□□ 0.26
RRP8-204ENST00000533907 ATP8B3O60423 1300 aa16.65■□□□□ 0.26
RRP8-204ENST00000533907 A0A087X0T9 212 aa16.65■□□□□ 0.26
RRP8-204ENST00000533907 CCDC188H7C350 402 aa16.65■□□□□ 0.26
RRP8-204ENST00000533907 PGRMC1O00264 195 aaKnown RBP16.65■□□□□ 0.26
RRP8-204ENST00000533907 GNA14O95837 355 aa16.65■□□□□ 0.26
RRP8-204ENST00000533907 FAM228BP0C875 321 aa16.65■□□□□ 0.26
RRP8-204ENST00000533907 SLC8A1P32418 973 aa16.65■□□□□ 0.26
RRP8-204ENST00000533907 RNASE9P60153 205 aaKnown RBP16.65■□□□□ 0.26
RRP8-204ENST00000533907 KLHL30Q0D2K2 578 aa16.65■□□□□ 0.26
RRP8-204ENST00000533907 XRCC4Q13426 336 aa16.65■□□□□ 0.26
RRP8-204ENST00000533907 N4BP2L2Q92802 583 aaPredicted RBP16.65■□□□□ 0.26
RRP8-204ENST00000533907 FAM84BQ96KN1 310 aaPredicted RBP16.65■□□□□ 0.26
RRP8-204ENST00000533907 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.65■□□□□ 0.26
RRP8-204ENST00000533907 CNOT10Q9H9A5 744 aaKnown RBP16.65■□□□□ 0.26
RRP8-204ENST00000533907 BSDC1Q9NW68 430 aaPredicted RBP16.65■□□□□ 0.26
RRP8-204ENST00000533907 SWAP70Q9UH65 585 aa16.65■□□□□ 0.26
RRP8-204ENST00000533907 LEMD3Q9Y2U8 911 aa16.65■□□□□ 0.26
RRP8-204ENST00000533907 DNAJC8O75937 253 aaPredicted RBP16.64■□□□□ 0.25
RRP8-204ENST00000533907 EZRP15311 586 aaKnown RBP16.64■□□□□ 0.25
RRP8-204ENST00000533907 SCTRP47872 440 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 MRPL12P52815 198 aaKnown RBP16.64■□□□□ 0.25
RRP8-204ENST00000533907 SEPT2Q15019 361 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 QPCTQ16769 361 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 ODF2Q5BJF6 829 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 GKAP1Q5VSY0 366 aaPredicted RBP16.64■□□□□ 0.25
RRP8-204ENST00000533907 OR2W6PQ8NHA6 318 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 RAB34Q9BZG1 259 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 VEZTQ9HBM0 779 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 HAUS2Q9NVX0 235 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 MCM9Q9NXL9 1143 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 FBXL5Q9UKA1 691 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 SMCO2A6NFE2 343 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 DNM1LO00429 736 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 KCNQ2O43526 872 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 MARSP56192 900 aaKnown RBP16.64■□□□□ 0.25
RRP8-204ENST00000533907 BYSLQ13895 437 aaKnown RBP16.64■□□□□ 0.25
RRP8-204ENST00000533907 SOGA3Q5TF21 947 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 PAXIP1Q6ZW49 1069 aaPredicted RBP16.64■□□□□ 0.25
RRP8-204ENST00000533907 TBCKQ8TEA7 893 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 UBLCP1Q8WVY7 318 aaPredicted RBP16.64■□□□□ 0.25
RRP8-204ENST00000533907 RAPGEF5Q92565 580 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 MTMR9Q96QG7 549 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 PACSIN1Q9BY11 444 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 NYXQ9GZU5 481 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 KDM4CQ9H3R0 1056 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 SLITRK6Q9H5Y7 841 aa16.64■□□□□ 0.25
RRP8-204ENST00000533907 TAF1P21675 1872 aa16.63■□□□□ 0.25
RRP8-204ENST00000533907 CEP104O60308 925 aa16.63■□□□□ 0.25
RRP8-204ENST00000533907 TXKP42681 527 aa16.63■□□□□ 0.25
RRP8-204ENST00000533907 CALCRLQ16602 461 aa16.63■□□□□ 0.25
RRP8-204ENST00000533907 TMEM119Q4V9L6 283 aa16.63■□□□□ 0.25
RRP8-204ENST00000533907 SPDYCQ5MJ68 293 aa16.63■□□□□ 0.25
RRP8-204ENST00000533907 C12orf60Q5U649 245 aa16.63■□□□□ 0.25
RRP8-204ENST00000533907 FBXO33Q7Z6M2 555 aa16.63■□□□□ 0.25
RRP8-204ENST00000533907 LINC00116Q8NCU8 138 aa16.63■□□□□ 0.25
RRP8-204ENST00000533907 DDX12PQ92771 950 aa16.63■□□□□ 0.25
RRP8-204ENST00000533907 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.63■□□□□ 0.257e-7■□□□□ 8.5
RRP8-204ENST00000533907 BCCIPQ9P287 314 aaKnown RBP eCLIP16.63■□□□□ 0.25
RRP8-204ENST00000533907 TPX2Q9ULW0 747 aaKnown RBP16.63■□□□□ 0.25
RRP8-204ENST00000533907 TRAF5O00463 557 aa16.62■□□□□ 0.25
RRP8-204ENST00000533907 USP17L8P0C7I0 530 aa16.62■□□□□ 0.25
RRP8-204ENST00000533907 TSPY3P0CV98 308 aa16.62■□□□□ 0.25
RRP8-204ENST00000533907 TSPY8P0CW00 308 aa16.62■□□□□ 0.25
RRP8-204ENST00000533907 PDHBP11177 359 aa16.62■□□□□ 0.25
RRP8-204ENST00000533907 ERCC3P19447 782 aa16.62■□□□□ 0.25
RRP8-204ENST00000533907 TMOD1P28289 359 aa16.62■□□□□ 0.25
RRP8-204ENST00000533907 NBPF9Q3BBW0 867 aa16.62■□□□□ 0.25
RRP8-204ENST00000533907 TMC3Q7Z5M5 1100 aa16.62■□□□□ 0.25
RRP8-204ENST00000533907 TRIM59Q8IWR1 403 aa16.62■□□□□ 0.25
RRP8-204ENST00000533907 FAM133AQ8N9E0 248 aa16.62■□□□□ 0.25
RRP8-204ENST00000533907 PSMD1Q99460 953 aa16.62■□□□□ 0.25
RRP8-204ENST00000533907 NEUROG2Q9H2A3 272 aa16.62■□□□□ 0.25
RRP8-204ENST00000533907 GANQ9H2C0 597 aa16.62■□□□□ 0.25
RRP8-204ENST00000533907 CNOT8Q9UFF9 292 aaKnown RBP16.62■□□□□ 0.25
RRP8-204ENST00000533907 ADAMTS1Q9UHI8 967 aa16.62■□□□□ 0.25
RRP8-204ENST00000533907 NOVA2Q9UNW9 492 aaKnown RBP16.62■□□□□ 0.25
RRP8-204ENST00000533907 NOC2LQ9Y3T9 749 aaKnown RBP16.62■□□□□ 0.25
RRP8-204ENST00000533907 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.62■□□□□ 0.25
RRP8-204ENST00000533907 ESYT2A0FGR8 921 aa16.62■□□□□ 0.25
RRP8-204ENST00000533907 SART1O43290 800 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms