RNA–Protein interactions for RNA: ENST00000533865.5

CTSC-207, Transcript of cathepsin C, humanhuman

TSL 4

Gene CTSC, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-207ENST00000533865 PNMA6FA0A0J9YX94 578 aa12.37□□□□□ -0.43
CTSC-207ENST00000533865 CXCL10P02778 98 aa12.37□□□□□ -0.43
CTSC-207ENST00000533865 CDC27P30260 824 aa12.37□□□□□ -0.43
CTSC-207ENST00000533865 BFSP2Q13515 415 aa12.37□□□□□ -0.43
CTSC-207ENST00000533865 SMAD2Q15796 467 aaKnown RBP12.37□□□□□ -0.43
CTSC-207ENST00000533865 NTRK3Q16288 839 aa12.37□□□□□ -0.43
CTSC-207ENST00000533865 TCEAL5Q5H9L2 206 aa12.37□□□□□ -0.43
CTSC-207ENST00000533865 NFRKBQ6P4R8 1299 aa12.37□□□□□ -0.43
CTSC-207ENST00000533865 KCTD1Q719H9 257 aa12.37□□□□□ -0.43
CTSC-207ENST00000533865 EEPD1Q7L9B9 569 aa12.37□□□□□ -0.43
CTSC-207ENST00000533865 NECAB1Q8N987 351 aa12.37□□□□□ -0.43
CTSC-207ENST00000533865 FBXO22Q8NEZ5 403 aa12.37□□□□□ -0.43
CTSC-207ENST00000533865 SMARCC2Q8TAQ2 1214 aa12.37□□□□□ -0.43
CTSC-207ENST00000533865 KIFC2Q96AC6 838 aa12.37□□□□□ -0.43
CTSC-207ENST00000533865 MTG1Q9BT17 334 aaPredicted RBP12.37□□□□□ -0.43
CTSC-207ENST00000533865 ACAD9Q9H845 621 aa12.37□□□□□ -0.43
CTSC-207ENST00000533865 NCOA5Q9HCD5 579 aaKnown RBP12.37□□□□□ -0.43
CTSC-207ENST00000533865 VTA1Q9NP79 307 aa12.37□□□□□ -0.43
CTSC-207ENST00000533865 SH3GLB2Q9NR46 395 aa12.37□□□□□ -0.43
CTSC-207ENST00000533865 HOMER2Q9NSB8 354 aa12.37□□□□□ -0.43
CTSC-207ENST00000533865 FAM217BQ9NTX9 383 aaPredicted RBP12.37□□□□□ -0.43
CTSC-207ENST00000533865 FAM50BQ9Y247 325 aa12.37□□□□□ -0.43
CTSC-207ENST00000533865 TMEM221A6NGB7 291 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 M0R296 226 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 ZBTB5O15062 677 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 GOLGA8HP0CJ92 632 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 RXRAP19793 462 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 PTPN11Q06124 597 aaPredicted RBP12.36□□□□□ -0.43
CTSC-207ENST00000533865 FUT2Q10981 343 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 MKRN4PQ13434 485 aaPredicted RBP12.36□□□□□ -0.43
CTSC-207ENST00000533865 TRIM29Q14134 588 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 PKN1Q16512 942 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 CTC1Q2NKJ3 1217 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 TKFCQ3LXA3 575 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 TIGD5Q53EQ6 642 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 FAM47CQ5HY64 1035 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 GALNT17Q6IS24 598 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 CNKSR3Q6P9H4 555 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 TRIM67Q6ZTA4 783 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 ERMP1Q7Z2K6 904 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 ADGRF4Q8IZF3 695 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 STAG2Q8N3U4 1231 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 SRBD1Q8N5C6 995 aaKnown RBP12.36□□□□□ -0.43
CTSC-207ENST00000533865 SAMD3Q8N6K7 520 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 BANK1Q8NDB2 785 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 NSUN7Q8NE18 718 aaKnown RBP12.36□□□□□ -0.43
CTSC-207ENST00000533865 SP7Q8TDD2 431 aaPredicted RBP12.36□□□□□ -0.43
CTSC-207ENST00000533865 AFAP1L1Q8TED9 768 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 PBXIP1Q96AQ6 731 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 MTMR8Q96EF0 704 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 IPO9Q96P70 1041 aaKnown RBP12.36□□□□□ -0.43
CTSC-207ENST00000533865 LARP6Q9BRS8 491 aaKnown RBP12.36□□□□□ -0.43
CTSC-207ENST00000533865 ORC3Q9UBD5 711 aaPredicted RBP12.36□□□□□ -0.43
CTSC-207ENST00000533865 PRR12Q9ULL5 1215 aa12.36□□□□□ -0.43
CTSC-207ENST00000533865 FRMPD2Q68DX3 1309 aaPredicted RBP12.36□□□□□ -0.43
CTSC-207ENST00000533865 SPTBN2O15020 2390 aa12.35□□□□□ -0.43
CTSC-207ENST00000533865 ABHD14A-ACY1A0A1B0GW23 586 aa12.35□□□□□ -0.43
CTSC-207ENST00000533865 RBM47A0AV96 593 aaKnown RBP12.35□□□□□ -0.43
CTSC-207ENST00000533865 PTPDC1A2A3K4 754 aa12.35□□□□□ -0.43
CTSC-207ENST00000533865 PROB1E7EW31 1015 aa12.35□□□□□ -0.43
CTSC-207ENST00000533865 NBNO60934 754 aa12.35□□□□□ -0.43
CTSC-207ENST00000533865 LARGE1O95461 756 aa12.35□□□□□ -0.43
CTSC-207ENST00000533865 MYL3P08590 195 aa12.35□□□□□ -0.43
CTSC-207ENST00000533865 CALML3P27482 149 aa12.35□□□□□ -0.43
CTSC-207ENST00000533865 HTRA4P83105 476 aaPredicted RBP12.35□□□□□ -0.43
CTSC-207ENST00000533865 DLX2Q07687 328 aaPredicted RBP12.35□□□□□ -0.43
CTSC-207ENST00000533865 RBL2Q08999 1139 aa12.35□□□□□ -0.43
CTSC-207ENST00000533865 PFKFB3Q16875 520 aaPredicted RBP12.35□□□□□ -0.43
CTSC-207ENST00000533865 MCTP2Q6DN12 878 aa12.35□□□□□ -0.43
CTSC-207ENST00000533865 PPP1R18Q6NYC8 613 aa12.35□□□□□ -0.43
CTSC-207ENST00000533865 FBXL6Q8N531 539 aa12.35□□□□□ -0.43
CTSC-207ENST00000533865 CCDC148Q8NFR7 591 aa12.35□□□□□ -0.43
CTSC-207ENST00000533865 DHX38Q92620 1227 aaKnown RBP12.35□□□□□ -0.43
CTSC-207ENST00000533865 PURBQ96QR8 312 aaKnown RBP12.35□□□□□ -0.43
CTSC-207ENST00000533865 AMNQ9BXJ7 453 aa12.35□□□□□ -0.43
CTSC-207ENST00000533865 SLC26A6Q9BXS9 759 aa12.35□□□□□ -0.43
CTSC-207ENST00000533865 RANBP17Q9H2T7 1088 aaKnown RBP12.35□□□□□ -0.43
CTSC-207ENST00000533865 JMJD4Q9H9V9 463 aa12.35□□□□□ -0.43
CTSC-207ENST00000533865 RNF146Q9NTX7 359 aa12.35□□□□□ -0.43
CTSC-207ENST00000533865 V9GY48 417 aaPredicted RBP12.35□□□□□ -0.43
CTSC-207ENST00000533865 BAHCC1Q9P281 2608 aa12.35□□□□□ -0.43
CTSC-207ENST00000533865 CNTNAP5Q8WYK1 1306 aa12.35□□□□□ -0.43
CTSC-207ENST00000533865 A6NJR5 290 aa12.34□□□□□ -0.43
CTSC-207ENST00000533865 MBTPS2O43462 519 aa12.34□□□□□ -0.43
CTSC-207ENST00000533865 PLEKHA8P1O95397 391 aa12.34□□□□□ -0.43
CTSC-207ENST00000533865 SCG2P13521 617 aa12.34□□□□□ -0.43
CTSC-207ENST00000533865 CPT1AP50416 773 aa12.34□□□□□ -0.43
CTSC-207ENST00000533865 VCPP55072 806 aaKnown RBP12.34□□□□□ -0.43
CTSC-207ENST00000533865 EPC2Q52LR7 807 aa12.34□□□□□ -0.43
CTSC-207ENST00000533865 TRAF7Q6Q0C0 670 aa12.34□□□□□ -0.43
CTSC-207ENST00000533865 ASCL5Q7RTU5 278 aa12.34□□□□□ -0.43
CTSC-207ENST00000533865 FBXO11Q86XK2 927 aa12.34□□□□□ -0.43
CTSC-207ENST00000533865 RAB11FIP4Q86YS3 637 aa12.34□□□□□ -0.43
CTSC-207ENST00000533865 CAGE1Q8TC20 777 aa12.34□□□□□ -0.43
CTSC-207ENST00000533865 BICD2Q8TD16 824 aa12.34□□□□□ -0.43
CTSC-207ENST00000533865 POP1Q99575 1024 aaKnown RBP12.34□□□□□ -0.43
CTSC-207ENST00000533865 UBA5Q9GZZ9 404 aa12.34□□□□□ -0.43
CTSC-207ENST00000533865 MAP3K20Q9NYL2 800 aaKnown RBP12.34□□□□□ -0.43
CTSC-207ENST00000533865 CYP39A1Q9NYL5 469 aa12.34□□□□□ -0.43
CTSC-207ENST00000533865 MYO10Q9HD67 2058 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms