RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 TBC1D22BQ9NU19 505 aa17.98■□□□□ 0.47
TSKU-204ENST00000533752 ERAP1Q9NZ08 941 aa17.98■□□□□ 0.47
TSKU-204ENST00000533752 PCDH10Q9P2E7 1040 aa17.98■□□□□ 0.47
TSKU-204ENST00000533752 KCNJ14Q9UNX9 436 aa17.98■□□□□ 0.47
TSKU-204ENST00000533752 DOCK5Q9H7D0 1870 aa17.97■□□□□ 0.47
TSKU-204ENST00000533752 C17orf102A2RUQ5 167 aa17.97■□□□□ 0.47
TSKU-204ENST00000533752 SMIM10L2AP0DMW4 78 aa17.97■□□□□ 0.47
TSKU-204ENST00000533752 SMIM10L2BP0DMW5 78 aa17.97■□□□□ 0.47
TSKU-204ENST00000533752 FDPSP14324 419 aaKnown RBP17.97■□□□□ 0.47
TSKU-204ENST00000533752 FXR1P51114 621 aaKnown RBP eCLIP17.97■□□□□ 0.47
TSKU-204ENST00000533752 HMGN5P82970 282 aaKnown RBP17.97■□□□□ 0.47
TSKU-204ENST00000533752 ITGB3BPQ13352 177 aaPredicted RBP17.97■□□□□ 0.47
TSKU-204ENST00000533752 TRIM50Q86XT4 487 aa17.97■□□□□ 0.47
TSKU-204ENST00000533752 CCDC83Q8IWF9 413 aa17.97■□□□□ 0.47
TSKU-204ENST00000533752 RETREG2Q8NC44 543 aa17.97■□□□□ 0.47
TSKU-204ENST00000533752 GLG1Q92896 1179 aa17.97■□□□□ 0.47
TSKU-204ENST00000533752 GSTTP1A0A1W2PQM5 241 aa17.96■□□□□ 0.47
TSKU-204ENST00000533752 JAK2O60674 1132 aa17.96■□□□□ 0.47
TSKU-204ENST00000533752 LGR5O75473 907 aa17.96■□□□□ 0.47
TSKU-204ENST00000533752 PFKMP08237 780 aa17.96■□□□□ 0.47
TSKU-204ENST00000533752 CSF2RAP15509 400 aa17.96■□□□□ 0.47
TSKU-204ENST00000533752 HOXC8P31273 242 aa17.96■□□□□ 0.47
TSKU-204ENST00000533752 RFC2P35250 354 aa17.96■□□□□ 0.47
TSKU-204ENST00000533752 KRT2P35908 639 aa17.96■□□□□ 0.47
TSKU-204ENST00000533752 MCM2P49736 904 aa17.96■□□□□ 0.47
TSKU-204ENST00000533752 ACTR2P61160 394 aa17.96■□□□□ 0.47
TSKU-204ENST00000533752 RBL2Q08999 1139 aa17.96■□□□□ 0.47
TSKU-204ENST00000533752 ST3GAL1Q11201 340 aa17.96■□□□□ 0.47
TSKU-204ENST00000533752 PTK7Q13308 1070 aa17.96■□□□□ 0.47
TSKU-204ENST00000533752 AFAP1L1Q8TED9 768 aa17.96■□□□□ 0.47
TSKU-204ENST00000533752 PPP1R13LQ8WUF5 828 aa17.96■□□□□ 0.47
TSKU-204ENST00000533752 TNPO1Q92973 898 aaKnown RBP17.96■□□□□ 0.47
TSKU-204ENST00000533752 NAP1L4Q99733 375 aaKnown RBP17.96■□□□□ 0.47
TSKU-204ENST00000533752 WNT8AQ9H1J5 351 aa17.96■□□□□ 0.47
TSKU-204ENST00000533752 IL23AQ9NPF7 189 aa17.96■□□□□ 0.47
TSKU-204ENST00000533752 UMODL1Q5DID0 1318 aa17.96■□□□□ 0.46
TSKU-204ENST00000533752 PARNO95453 639 aaKnown RBP17.95■□□□□ 0.46
TSKU-204ENST00000533752 GCFC2P16383 781 aaKnown RBP17.95■□□□□ 0.46
TSKU-204ENST00000533752 SLC26A2P50443 739 aa17.95■□□□□ 0.46
TSKU-204ENST00000533752 CCL23P55773 120 aa17.95■□□□□ 0.46
TSKU-204ENST00000533752 KRT76Q01546 638 aa17.95■□□□□ 0.46
TSKU-204ENST00000533752 ZNF746Q6NUN9 644 aaPredicted RBP17.95■□□□□ 0.46
TSKU-204ENST00000533752 SMAP1Q8IYB5 467 aaPredicted RBP17.95■□□□□ 0.46
TSKU-204ENST00000533752 RPUSD2Q8IZ73 545 aaKnown RBP17.95■□□□□ 0.46
TSKU-204ENST00000533752 LENG9Q96B70 501 aa17.95■□□□□ 0.46
TSKU-204ENST00000533752 RNPC3Q96LT9 517 aaKnown RBP17.95■□□□□ 0.46
TSKU-204ENST00000533752 MTIF3Q9H2K0 278 aaKnown RBP17.95■□□□□ 0.46
TSKU-204ENST00000533752 NRCAMQ92823 1304 aa17.95■□□□□ 0.46
TSKU-204ENST00000533752 CYP3A7-CYP3A51PA0A087WV96 503 aa17.94■□□□□ 0.46
TSKU-204ENST00000533752 MMP1P03956 469 aa17.94■□□□□ 0.46
TSKU-204ENST00000533752 CYP3A7P24462 503 aa17.94■□□□□ 0.46
TSKU-204ENST00000533752 SHHQ15465 462 aa17.94■□□□□ 0.46
TSKU-204ENST00000533752 Q4G0T1 1027 aa17.94■□□□□ 0.46
TSKU-204ENST00000533752 FAM160B1Q5W0V3 765 aa17.94■□□□□ 0.46
TSKU-204ENST00000533752 MIS18BP1Q6P0N0 1132 aa17.94■□□□□ 0.46
TSKU-204ENST00000533752 PLPPR4Q7Z2D5 763 aa17.94■□□□□ 0.46
TSKU-204ENST00000533752 NEK8Q86SG6 692 aa17.94■□□□□ 0.46
TSKU-204ENST00000533752 SERINC5Q86VE9 423 aa17.94■□□□□ 0.46
TSKU-204ENST00000533752 ATP6V0A1Q93050 837 aa17.94■□□□□ 0.46
TSKU-204ENST00000533752 CTAGE1Q96RT6 745 aa17.94■□□□□ 0.46
TSKU-204ENST00000533752 RIT2Q99578 217 aa17.94■□□□□ 0.46
TSKU-204ENST00000533752 TELO2Q9Y4R8 837 aa17.94■□□□□ 0.46
TSKU-204ENST00000533752 LAMA3Q16787 3333 aa17.93■□□□□ 0.46
TSKU-204ENST00000533752 TANC1Q9C0D5 1861 aa17.93■□□□□ 0.46
TSKU-204ENST00000533752 DDX39AO00148 427 aaKnown RBP17.93■□□□□ 0.46
TSKU-204ENST00000533752 DHX15O43143 795 aaKnown RBP17.93■□□□□ 0.46
TSKU-204ENST00000533752 CAND2O75155 1236 aa17.93■□□□□ 0.46
TSKU-204ENST00000533752 ATG7O95352 703 aa17.93■□□□□ 0.46
TSKU-204ENST00000533752 SELPP16109 830 aa17.93■□□□□ 0.46
TSKU-204ENST00000533752 EPHB4P54760 987 aa17.93■□□□□ 0.46
TSKU-204ENST00000533752 PPFIA1Q13136 1202 aa17.93■□□□□ 0.46
TSKU-204ENST00000533752 SAFBQ15424 915 aaKnown RBP eCLIP17.93■□□□□ 0.46
TSKU-204ENST00000533752 INF2Q27J81 1249 aa17.93■□□□□ 0.46
TSKU-204ENST00000533752 C9orf50Q5SZB4 431 aa17.93■□□□□ 0.46
TSKU-204ENST00000533752 MBOAT7Q96N66 472 aa17.93■□□□□ 0.46
TSKU-204ENST00000533752 BACH2Q9BYV9 841 aa17.93■□□□□ 0.46
TSKU-204ENST00000533752 GJB4Q9NTQ9 266 aa17.93■□□□□ 0.46
TSKU-204ENST00000533752 KIF3AQ9Y496 699 aa17.93■□□□□ 0.46
TSKU-204ENST00000533752 BACH1O14867 736 aa17.92■□□□□ 0.46
TSKU-204ENST00000533752 MSH4O15457 936 aa17.92■□□□□ 0.46
TSKU-204ENST00000533752 GAS7O60861 476 aa17.92■□□□□ 0.46
TSKU-204ENST00000533752 TDP2O95551 362 aa17.92■□□□□ 0.46
TSKU-204ENST00000533752 CCNE2O96020 404 aa17.92■□□□□ 0.46
TSKU-204ENST00000533752 RPLP2P05387 115 aaKnown RBP17.92■□□□□ 0.46
TSKU-204ENST00000533752 IQCF3P0C7M6 154 aa17.92■□□□□ 0.46
TSKU-204ENST00000533752 MARK3P27448 753 aa17.92■□□□□ 0.46
TSKU-204ENST00000533752 STAT5BP51692 787 aa17.92■□□□□ 0.46
TSKU-204ENST00000533752 TMEM240Q5SV17 173 aa17.92■□□□□ 0.46
TSKU-204ENST00000533752 LRCH2Q5VUJ6 765 aa17.92■□□□□ 0.46
TSKU-204ENST00000533752 KRT40Q6A162 431 aa17.92■□□□□ 0.46
TSKU-204ENST00000533752 GPR153Q6NV75 609 aa17.92■□□□□ 0.46
TSKU-204ENST00000533752 PIK3AP1Q6ZUJ8 805 aa17.92■□□□□ 0.46
TSKU-204ENST00000533752 LRRC8DQ7L1W4 858 aa17.92■□□□□ 0.46
TSKU-204ENST00000533752 FAM184AQ8NB25 1140 aa17.92■□□□□ 0.46
TSKU-204ENST00000533752 LMBR1Q8WVP7 490 aa17.92■□□□□ 0.46
TSKU-204ENST00000533752 SLC5A5Q92911 643 aa17.92■□□□□ 0.46
TSKU-204ENST00000533752 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.92■□□□□ 0.466e-7■■□□□ 13.2
TSKU-204ENST00000533752 RNPEPQ9H4A4 650 aa17.92■□□□□ 0.46
TSKU-204ENST00000533752 DDX25Q9UHL0 483 aaKnown RBP17.92■□□□□ 0.46
TSKU-204ENST00000533752 IGKV6D-21A0A0A0MT36 114 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms